RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 ZNF622Q969S3 477 aaKnown RBP eCLIP13.24□□□□□ -0.29
CRIM1-204ENST00000428774 BOLA2Q9H3K6 86 aa13.24□□□□□ -0.29
CRIM1-204ENST00000428774 SNED1Q8TER0 1413 aa13.23□□□□□ -0.29
CRIM1-204ENST00000428774 TRIM6-TRIM34B2RNG4 842 aa13.23□□□□□ -0.29
CRIM1-204ENST00000428774 H0YIN7 160 aa13.23□□□□□ -0.29
CRIM1-204ENST00000428774 IFIT1P09914 478 aaKnown RBP13.23□□□□□ -0.29
CRIM1-204ENST00000428774 KLRK1P26718 216 aa13.23□□□□□ -0.29
CRIM1-204ENST00000428774 PHKA1P46020 1223 aa13.23□□□□□ -0.29
CRIM1-204ENST00000428774 UBE4AQ14139 1066 aa13.23□□□□□ -0.29
CRIM1-204ENST00000428774 TTC39AQ5SRH9 613 aa13.23□□□□□ -0.29
CRIM1-204ENST00000428774 ANKRD2Q9GZV1 360 aa13.23□□□□□ -0.29
CRIM1-204ENST00000428774 ZNF219Q9P2Y4 722 aaPredicted RBP13.23□□□□□ -0.29
CRIM1-204ENST00000428774 NDUFB9Q9Y6M9 179 aa13.23□□□□□ -0.29
CRIM1-204ENST00000428774 XDHP47989 1333 aa13.22□□□□□ -0.29
CRIM1-204ENST00000428774 BBOX1O75936 387 aa13.22□□□□□ -0.29
CRIM1-204ENST00000428774 ARID4AP29374 1257 aaPredicted RBP13.22□□□□□ -0.29
CRIM1-204ENST00000428774 GPSM2P81274 684 aa13.22□□□□□ -0.29
CRIM1-204ENST00000428774 SCARF1Q14162 830 aa13.22□□□□□ -0.29
CRIM1-204ENST00000428774 TBC1D9Q6ZT07 1266 aa13.22□□□□□ -0.29
CRIM1-204ENST00000428774 TMC4Q7Z404 712 aa13.22□□□□□ -0.29
CRIM1-204ENST00000428774 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.22□□□□□ -0.29
CRIM1-204ENST00000428774 RILPL2Q969X0 211 aa13.22□□□□□ -0.29
CRIM1-204ENST00000428774 EDC3Q96F86 508 aaKnown RBP13.22□□□□□ -0.29
CRIM1-204ENST00000428774 HAUS7Q99871 368 aa13.22□□□□□ -0.29
CRIM1-204ENST00000428774 TSHZ2Q9NRE2 1034 aa13.22□□□□□ -0.29
CRIM1-204ENST00000428774 FER1L6Q2WGJ9 1857 aa13.21□□□□□ -0.29
CRIM1-204ENST00000428774 CCDC88AQ3V6T2 1871 aa13.21□□□□□ -0.29
CRIM1-204ENST00000428774 ZNF804BA4D1E1 1349 aa13.21□□□□□ -0.29
CRIM1-204ENST00000428774 YBX3P16989 372 aaKnown RBP eCLIP13.21□□□□□ -0.29
CRIM1-204ENST00000428774 ALDH1B1P30837 517 aa13.21□□□□□ -0.29
CRIM1-204ENST00000428774 CCDC158Q5M9N0 1113 aa13.21□□□□□ -0.29
CRIM1-204ENST00000428774 GORABQ5T7V8 394 aa13.21□□□□□ -0.29
CRIM1-204ENST00000428774 CCDC102BQ68D86 513 aa13.21□□□□□ -0.29
CRIM1-204ENST00000428774 PRPF40BQ6NWY9 871 aaKnown RBP13.21□□□□□ -0.29
CRIM1-204ENST00000428774 CNTROBQ8N137 903 aa13.21□□□□□ -0.29
CRIM1-204ENST00000428774 DNAJC2Q99543 621 aaKnown RBP13.21□□□□□ -0.29
CRIM1-204ENST00000428774 ATP6V0A2Q9Y487 856 aa13.21□□□□□ -0.29
CRIM1-204ENST00000428774 RFX7Q2KHR2 1363 aa13.2□□□□□ -0.3
CRIM1-204ENST00000428774 SEC24BO95487 1268 aa13.2□□□□□ -0.3
CRIM1-204ENST00000428774 MCAMP43121 646 aa13.2□□□□□ -0.3
CRIM1-204ENST00000428774 KCNJ4P48050 445 aa13.2□□□□□ -0.3
CRIM1-204ENST00000428774 PI16Q6UXB8 463 aa13.2□□□□□ -0.3
CRIM1-204ENST00000428774 SP8Q8IXZ3 490 aa13.2□□□□□ -0.3
CRIM1-204ENST00000428774 ZNF512BQ96KM6 892 aaPredicted RBP13.2□□□□□ -0.3
CRIM1-204ENST00000428774 GPR101Q96P66 508 aaPredicted RBP13.2□□□□□ -0.3
CRIM1-204ENST00000428774 PSME4Q14997 1843 aa13.19□□□□□ -0.3
CRIM1-204ENST00000428774 UFL1O94874 794 aa13.19□□□□□ -0.3
CRIM1-204ENST00000428774 GYG1P46976 350 aa13.19□□□□□ -0.3
CRIM1-204ENST00000428774 BCAMP50895 628 aa13.19□□□□□ -0.3
CRIM1-204ENST00000428774 CNKSR1Q969H4 720 aa13.19□□□□□ -0.3
CRIM1-204ENST00000428774 EVI5LQ96CN4 794 aa13.19□□□□□ -0.3
CRIM1-204ENST00000428774 PODXL2Q9NZ53 605 aa13.19□□□□□ -0.3
CRIM1-204ENST00000428774 PIM2Q9P1W9 311 aa13.19□□□□□ -0.3
CRIM1-204ENST00000428774 ANKIB1Q9P2G1 1089 aa13.19□□□□□ -0.3
CRIM1-204ENST00000428774 BCS1LQ9Y276 419 aa13.19□□□□□ -0.3
CRIM1-204ENST00000428774 LEMD3Q9Y2U8 911 aa13.19□□□□□ -0.3
CRIM1-204ENST00000428774 MED23Q9ULK4 1368 aa13.19□□□□□ -0.3
CRIM1-204ENST00000428774 CHD4Q14839 1912 aa13.18□□□□□ -0.3
CRIM1-204ENST00000428774 GOLIM4O00461 696 aa13.18□□□□□ -0.3
CRIM1-204ENST00000428774 UQCRFS1P1P0C7P4 283 aa13.18□□□□□ -0.3
CRIM1-204ENST00000428774 ATP2B4P23634 1241 aa13.18□□□□□ -0.3
CRIM1-204ENST00000428774 CHMLP26374 656 aa13.18□□□□□ -0.3
CRIM1-204ENST00000428774 ZAP70P43403 619 aa13.18□□□□□ -0.3
CRIM1-204ENST00000428774 RASGRF1Q13972 1273 aa13.18□□□□□ -0.3
CRIM1-204ENST00000428774 TXNRD3Q86VQ6 643 aa13.18□□□□□ -0.3
CRIM1-204ENST00000428774 TTLL6Q8N841 843 aa13.18□□□□□ -0.3
CRIM1-204ENST00000428774 FSD1Q9BTV5 496 aa13.18□□□□□ -0.3
CRIM1-204ENST00000428774 ANTXR1Q9H6X2 564 aa13.18□□□□□ -0.3
CRIM1-204ENST00000428774 SNRKQ9NRH2 765 aa13.18□□□□□ -0.3
CRIM1-204ENST00000428774 PAG1Q9NWQ8 432 aa13.18□□□□□ -0.3
CRIM1-204ENST00000428774 GGA1Q9UJY5 639 aa13.18□□□□□ -0.3
CRIM1-204ENST00000428774 NSFL1CQ9UNZ2 370 aaKnown RBP13.18□□□□□ -0.3
CRIM1-204ENST00000428774 SBF1O95248 1867 aa13.17□□□□□ -0.3
CRIM1-204ENST00000428774 C21orf2O43822 256 aa13.17□□□□□ -0.3
CRIM1-204ENST00000428774 DALRD3Q5D0E6 543 aaKnown RBP13.17□□□□□ -0.3
CRIM1-204ENST00000428774 C15orf52Q6ZUT6 534 aaKnown RBP13.17□□□□□ -0.3
CRIM1-204ENST00000428774 FBXO33Q7Z6M2 555 aa13.17□□□□□ -0.3
CRIM1-204ENST00000428774 TBC1D16Q8TBP0 767 aa13.17□□□□□ -0.3
CRIM1-204ENST00000428774 FAM84BQ96KN1 310 aaPredicted RBP13.17□□□□□ -0.3
CRIM1-204ENST00000428774 IL25Q9H293 177 aa13.17□□□□□ -0.3
CRIM1-204ENST00000428774 HMG20BQ9P0W2 317 aa13.17□□□□□ -0.3
CRIM1-204ENST00000428774 POLLQ9UGP5 575 aa13.17□□□□□ -0.3
CRIM1-204ENST00000428774 GOLGB1Q14789 3259 aaKnown RBP13.16□□□□□ -0.3
CRIM1-204ENST00000428774 MFAP1P55081 439 aaKnown RBP13.16□□□□□ -0.3
CRIM1-204ENST00000428774 KBTBD3Q8NAB2 608 aa13.16□□□□□ -0.3
CRIM1-204ENST00000428774 C7orf43Q8WVR3 580 aa13.16□□□□□ -0.3
CRIM1-204ENST00000428774 IQSEC3Q9UPP2 1182 aaPredicted RBP13.16□□□□□ -0.3
CRIM1-204ENST00000428774 SCN9AQ15858 1988 aa13.15□□□□□ -0.3
CRIM1-204ENST00000428774 CHGBP05060 677 aa13.15□□□□□ -0.3
CRIM1-204ENST00000428774 CYP2E1P05181 493 aaPredicted RBP13.15□□□□□ -0.3
CRIM1-204ENST00000428774 FKBP4Q02790 459 aaKnown RBP eCLIP13.15□□□□□ -0.39e-6■□□□□ 10.4
CRIM1-204ENST00000428774 CAVIN4Q5BKX8 364 aa13.15□□□□□ -0.3
CRIM1-204ENST00000428774 CASC1Q6TDU7 716 aa13.15□□□□□ -0.3
CRIM1-204ENST00000428774 MPNDQ8N594 471 aa13.15□□□□□ -0.3
CRIM1-204ENST00000428774 SPATA5Q8NB90 893 aa13.15□□□□□ -0.3
CRIM1-204ENST00000428774 ESYT1Q9BSJ8 1104 aa13.15□□□□□ -0.3
CRIM1-204ENST00000428774 PIH1D3Q9NQM4 214 aaKnown RBP13.15□□□□□ -0.3
CRIM1-204ENST00000428774 TIAM2Q8IVF5 1701 aa13.14□□□□□ -0.31
CRIM1-204ENST00000428774 A0A0D9SFI3 127 aa13.14□□□□□ -0.31
CRIM1-204ENST00000428774 HIBADHP31937 336 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms