RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 GMLQ99445 158 aa11.94□□□□□ -0.5
TRIM39-208ENST00000428555 MXD3Q9BW11 206 aa11.94□□□□□ -0.5
TRIM39-208ENST00000428555 PUS3Q9BZE2 481 aaKnown RBP11.94□□□□□ -0.5
TRIM39-208ENST00000428555 COA1Q9GZY4 146 aa11.94□□□□□ -0.5
TRIM39-208ENST00000428555 BICC1Q9H694 974 aaKnown RBP11.94□□□□□ -0.5
TRIM39-208ENST00000428555 CNNM1Q9NRU3 951 aa11.94□□□□□ -0.5
TRIM39-208ENST00000428555 LRRC37AA6NMS7 1700 aa11.94□□□□□ -0.5
TRIM39-208ENST00000428555 LTBP1Q14766 1721 aa11.94□□□□□ -0.5
TRIM39-208ENST00000428555 MED23Q9ULK4 1368 aa11.93□□□□□ -0.5
TRIM39-208ENST00000428555 BRPF1P55201 1214 aaPredicted RBP11.93□□□□□ -0.5
TRIM39-208ENST00000428555 HNRNPUQ00839 825 aaKnown RBP eCLIP11.93□□□□□ -0.5
TRIM39-208ENST00000428555 CDC37L1Q7L3B6 337 aa11.93□□□□□ -0.5
TRIM39-208ENST00000428555 ANKRD44Q8N8A2 993 aa11.93□□□□□ -0.5
TRIM39-208ENST00000428555 AGBL3Q8NEM8 1001 aa11.93□□□□□ -0.5
TRIM39-208ENST00000428555 FBXW7Q969H0 707 aa11.93□□□□□ -0.5
TRIM39-208ENST00000428555 USP17L8P0C7I0 530 aa11.92□□□□□ -0.5
TRIM39-208ENST00000428555 VEGFBP49765 207 aa11.92□□□□□ -0.5
TRIM39-208ENST00000428555 ZNF280AP59817 542 aaPredicted RBP11.92□□□□□ -0.5
TRIM39-208ENST00000428555 DEFB115Q30KQ5 88 aa11.92□□□□□ -0.5
TRIM39-208ENST00000428555 RABL6Q3YEC7 729 aaPredicted RBP11.92□□□□□ -0.5
TRIM39-208ENST00000428555 DACT2Q5SW24 774 aa11.92□□□□□ -0.5
TRIM39-208ENST00000428555 TTLL5Q6EMB2 1281 aa11.92□□□□□ -0.5
TRIM39-208ENST00000428555 ABT1Q9ULW3 272 aaKnown RBP11.92□□□□□ -0.5
TRIM39-208ENST00000428555 ASTN2O75129 1339 aaPredicted RBP11.91□□□□□ -0.5
TRIM39-208ENST00000428555 CACNA1FO60840 1977 aa11.91□□□□□ -0.5
TRIM39-208ENST00000428555 CELF2O95319 508 aaKnown RBP11.91□□□□□ -0.5
TRIM39-208ENST00000428555 GTF2IP78347 998 aa11.91□□□□□ -0.5
TRIM39-208ENST00000428555 SCARF1Q14162 830 aa11.91□□□□□ -0.5
TRIM39-208ENST00000428555 KIF4BQ2VIQ3 1234 aa11.91□□□□□ -0.5
TRIM39-208ENST00000428555 STRIP1Q5VSL9 837 aa11.91□□□□□ -0.5
TRIM39-208ENST00000428555 API5Q9BZZ5 524 aaKnown RBP11.91□□□□□ -0.5
TRIM39-208ENST00000428555 CD209Q9NNX6 404 aa11.91□□□□□ -0.5
TRIM39-208ENST00000428555 RIPOR2Q9Y4F9 1068 aa11.91□□□□□ -0.5
TRIM39-208ENST00000428555 IRS2Q9Y4H2 1338 aa11.9□□□□□ -0.5
TRIM39-208ENST00000428555 RASSF10A6NK89 507 aa11.9□□□□□ -0.5
TRIM39-208ENST00000428555 BCAR3O75815 825 aa11.9□□□□□ -0.5
TRIM39-208ENST00000428555 LRRC24Q50LG9 513 aa11.9□□□□□ -0.5
TRIM39-208ENST00000428555 C15orf52Q6ZUT6 534 aaKnown RBP11.9□□□□□ -0.5
TRIM39-208ENST00000428555 KRT26Q7Z3Y9 468 aa11.9□□□□□ -0.5
TRIM39-208ENST00000428555 KLHDC4Q8TBB5 520 aa11.9□□□□□ -0.5
TRIM39-208ENST00000428555 DCPSQ96C86 337 aaKnown RBP11.9□□□□□ -0.5
TRIM39-208ENST00000428555 ZNF408Q9H9D4 720 aa11.9□□□□□ -0.5
TRIM39-208ENST00000428555 CNTNAP1P78357 1384 aa11.9□□□□□ -0.5
TRIM39-208ENST00000428555 ADAMTSL1Q8N6G6 1762 aa11.9□□□□□ -0.51
TRIM39-208ENST00000428555 ARHGAP45Q92619 1136 aa11.89□□□□□ -0.51
TRIM39-208ENST00000428555 MYOZ2Q9NPC6 264 aa11.89□□□□□ -0.51
TRIM39-208ENST00000428555 ADM5C9JUS6 153 aa11.88□□□□□ -0.51
TRIM39-208ENST00000428555 UBTFL1P0CB47 393 aaPredicted RBP11.88□□□□□ -0.51
TRIM39-208ENST00000428555 IL1R1P14778 569 aa11.88□□□□□ -0.51
TRIM39-208ENST00000428555 UBE4AQ14139 1066 aa11.88□□□□□ -0.51
TRIM39-208ENST00000428555 NBPF9Q3BBW0 867 aa11.88□□□□□ -0.51
TRIM39-208ENST00000428555 ANGEL2Q5VTE6 544 aaKnown RBP11.88□□□□□ -0.51
TRIM39-208ENST00000428555 ZNF804AQ7Z570 1209 aa11.88□□□□□ -0.51
TRIM39-208ENST00000428555 OGFOD1Q8N543 542 aa11.88□□□□□ -0.51
TRIM39-208ENST00000428555 FRAT1Q92837 279 aaPredicted RBP11.88□□□□□ -0.51
TRIM39-208ENST00000428555 FAM84BQ96KN1 310 aaPredicted RBP11.88□□□□□ -0.51
TRIM39-208ENST00000428555 GGA3Q9NZ52 723 aa11.88□□□□□ -0.51
TRIM39-208ENST00000428555 TNNQ9UQP3 1299 aa11.88□□□□□ -0.51
TRIM39-208ENST00000428555 TLL2Q9Y6L7 1015 aa11.88□□□□□ -0.51
TRIM39-208ENST00000428555 IPO8O15397 1037 aaKnown RBP11.87□□□□□ -0.51
TRIM39-208ENST00000428555 HSPA1AP0DMV8 641 aaKnown RBP11.87□□□□□ -0.51
TRIM39-208ENST00000428555 HSPA1BP0DMV9 641 aaKnown RBP11.87□□□□□ -0.51
TRIM39-208ENST00000428555 HIBADHP31937 336 aaKnown RBP11.87□□□□□ -0.51
TRIM39-208ENST00000428555 GYG1P46976 350 aa11.87□□□□□ -0.51
TRIM39-208ENST00000428555 RFX5P48382 616 aaPredicted RBP11.87□□□□□ -0.51
TRIM39-208ENST00000428555 GRM1Q13255 1194 aa11.87□□□□□ -0.51
TRIM39-208ENST00000428555 METTL24Q5JXM2 366 aa11.87□□□□□ -0.51
TRIM39-208ENST00000428555 INTS3Q68E01 1043 aaKnown RBP11.87□□□□□ -0.51
TRIM39-208ENST00000428555 CYP4F22Q6NT55 531 aa11.87□□□□□ -0.51
TRIM39-208ENST00000428555 PAXIP1Q6ZW49 1069 aaPredicted RBP11.87□□□□□ -0.51
TRIM39-208ENST00000428555 SAPCD2Q86UD0 394 aa11.87□□□□□ -0.51
TRIM39-208ENST00000428555 KIAA0825Q8IV33 1275 aa11.87□□□□□ -0.51
TRIM39-208ENST00000428555 SULF1Q8IWU6 871 aa11.87□□□□□ -0.51
TRIM39-208ENST00000428555 CERS5Q8N5B7 392 aa11.87□□□□□ -0.51
TRIM39-208ENST00000428555 SCAF8Q9UPN6 1271 aaKnown RBP11.87□□□□□ -0.51
TRIM39-208ENST00000428555 JAG2Q9Y219 1238 aa11.87□□□□□ -0.51
TRIM39-208ENST00000428555 MROH5Q6ZUA9 1318 aa11.86□□□□□ -0.51
TRIM39-208ENST00000428555 MYO3BQ8WXR4 1341 aa11.86□□□□□ -0.51
TRIM39-208ENST00000428555 WDR33Q9C0J8 1336 aaKnown RBP11.86□□□□□ -0.51
TRIM39-208ENST00000428555 SASH1O94885 1247 aa11.86□□□□□ -0.51
TRIM39-208ENST00000428555 PTPN12Q05209 780 aaKnown RBP11.86□□□□□ -0.51
TRIM39-208ENST00000428555 CAPNS2Q96L46 248 aa11.86□□□□□ -0.51
TRIM39-208ENST00000428555 MEIS3Q99687 375 aa11.86□□□□□ -0.51
TRIM39-208ENST00000428555 LRRFIP2Q9Y608 721 aaKnown RBP11.86□□□□□ -0.51
TRIM39-208ENST00000428555 SCN9AQ15858 1988 aa11.86□□□□□ -0.51
TRIM39-208ENST00000428555 EYA2O00167 538 aa11.85□□□□□ -0.51
TRIM39-208ENST00000428555 WNT10BO00744 389 aa11.85□□□□□ -0.51
TRIM39-208ENST00000428555 PDE8BO95263 885 aa11.85□□□□□ -0.51
TRIM39-208ENST00000428555 TRIM27P14373 513 aa11.85□□□□□ -0.51
TRIM39-208ENST00000428555 ATF7IPQ6VMQ6 1270 aa11.85□□□□□ -0.51
TRIM39-208ENST00000428555 FBXO33Q7Z6M2 555 aa11.85□□□□□ -0.51
TRIM39-208ENST00000428555 TDRD7Q8NHU6 1098 aaKnown RBP11.85□□□□□ -0.51
TRIM39-208ENST00000428555 CLUAP1Q96AJ1 413 aa11.85□□□□□ -0.51
TRIM39-208ENST00000428555 HDAC9Q9UKV0 1011 aa11.85□□□□□ -0.51
TRIM39-208ENST00000428555 ZNF609O15014 1411 aa11.85□□□□□ -0.51
TRIM39-208ENST00000428555 KIF16BQ96L93 1317 aa11.85□□□□□ -0.51
TRIM39-208ENST00000428555 MYH3P11055 1940 aa11.84□□□□□ -0.51
TRIM39-208ENST00000428555 F8W031 263 aaPredicted RBP11.84□□□□□ -0.51
TRIM39-208ENST00000428555 AOC2O75106 756 aa11.84□□□□□ -0.51
TRIM39-208ENST00000428555 MMP14P50281 582 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms