RNA–Protein interactions for RNA: ENST00000428425.1

NCBP2-205, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 2,220 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-205ENST00000428425 SMIM5Q71RC9 77 aa16.53■□□□□ 0.24
NCBP2-205ENST00000428425 HELBQ8NG08 1087 aaPredicted RBP16.53■□□□□ 0.24
NCBP2-205ENST00000428425 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.53■□□□□ 0.24
NCBP2-205ENST00000428425 LRRC2Q9BYS8 371 aa16.53■□□□□ 0.24
NCBP2-205ENST00000428425 BCL9LQ86UU0 1499 aa16.53■□□□□ 0.24
NCBP2-205ENST00000428425 SNAP23O00161 211 aa16.53■□□□□ 0.24
NCBP2-205ENST00000428425 FOXP2O15409 715 aa16.53■□□□□ 0.24
NCBP2-205ENST00000428425 ZSCAN22P10073 491 aaPredicted RBP16.53■□□□□ 0.24
NCBP2-205ENST00000428425 HSPD1P10809 573 aaKnown RBP16.53■□□□□ 0.24
NCBP2-205ENST00000428425 MCAMP43121 646 aa16.53■□□□□ 0.24
NCBP2-205ENST00000428425 STK3Q13188 491 aa16.53■□□□□ 0.24
NCBP2-205ENST00000428425 ZSCAN23Q3MJ62 389 aa16.53■□□□□ 0.24
NCBP2-205ENST00000428425 NEK1Q96PY6 1258 aa16.53■□□□□ 0.24
NCBP2-205ENST00000428425 LAMA4Q16363 1823 aa16.52■□□□□ 0.24
NCBP2-205ENST00000428425 AKAP11Q9UKA4 1901 aa16.52■□□□□ 0.24
NCBP2-205ENST00000428425 GADD45BO75293 160 aaPredicted RBP16.52■□□□□ 0.24
NCBP2-205ENST00000428425 MRE11P49959 708 aa16.52■□□□□ 0.24
NCBP2-205ENST00000428425 TMEM63CQ9P1W3 806 aa16.52■□□□□ 0.24
NCBP2-205ENST00000428425 ATRNO75882 1429 aa16.52■□□□□ 0.24
NCBP2-205ENST00000428425 TTLL5Q6EMB2 1281 aa16.51■□□□□ 0.23
NCBP2-205ENST00000428425 SEC31BQ9NQW1 1179 aa16.51■□□□□ 0.23
NCBP2-205ENST00000428425 LRP5O75197 1615 aa16.51■□□□□ 0.23
NCBP2-205ENST00000428425 COL4A1P02462 1669 aa16.51■□□□□ 0.23
NCBP2-205ENST00000428425 MTMR6Q9Y217 621 aa16.51■□□□□ 0.23
NCBP2-205ENST00000428425 CNPY2Q9Y2B0 182 aa16.51■□□□□ 0.23
NCBP2-205ENST00000428425 F13A1P00488 732 aa16.5■□□□□ 0.23
NCBP2-205ENST00000428425 Q6ZUG5 572 aa16.5■□□□□ 0.23
NCBP2-205ENST00000428425 DSCC1Q9BVC3 393 aa16.5■□□□□ 0.23
NCBP2-205ENST00000428425 ALDH8A1Q9H2A2 487 aaPredicted RBP16.5■□□□□ 0.23
NCBP2-205ENST00000428425 DDX60Q8IY21 1712 aaKnown RBP16.5■□□□□ 0.23
NCBP2-205ENST00000428425 MYO5AQ9Y4I1 1855 aaKnown RBP16.5■□□□□ 0.23
NCBP2-205ENST00000428425 PDE8BO95263 885 aa16.5■□□□□ 0.23
NCBP2-205ENST00000428425 KRT32Q14532 448 aa16.5■□□□□ 0.23
NCBP2-205ENST00000428425 USP48Q86UV5 1035 aa16.5■□□□□ 0.23
NCBP2-205ENST00000428425 LINC00116Q8NCU8 138 aa16.5■□□□□ 0.23
NCBP2-205ENST00000428425 PUS7LQ9H0K6 701 aaKnown RBP16.5■□□□□ 0.23
NCBP2-205ENST00000428425 COL5A3P25940 1745 aaPredicted RBP16.5■□□□□ 0.23
NCBP2-205ENST00000428425 CICQ96RK0 1608 aaPredicted RBP16.5■□□□□ 0.23
NCBP2-205ENST00000428425 PHKA1P46020 1223 aa16.49■□□□□ 0.23
NCBP2-205ENST00000428425 WASHC4Q2M389 1173 aa16.49■□□□□ 0.23
NCBP2-205ENST00000428425 UTP14AQ9BVJ6 771 aaKnown RBP16.49■□□□□ 0.23
NCBP2-205ENST00000428425 NIP7Q9Y221 180 aaKnown RBP eCLIP16.49■□□□□ 0.23
NCBP2-205ENST00000428425 NTSR2O95665 410 aa16.49■□□□□ 0.23
NCBP2-205ENST00000428425 FAM182BQ5T319 152 aa16.49■□□□□ 0.23
NCBP2-205ENST00000428425 VPS37CA5D8V6 355 aaPredicted RBP16.48■□□□□ 0.23
NCBP2-205ENST00000428425 ANKRD1Q15327 319 aa16.48■□□□□ 0.23
NCBP2-205ENST00000428425 TPRNQ4KMQ1 711 aa16.48■□□□□ 0.23
NCBP2-205ENST00000428425 PIH1D3Q9NQM4 214 aaKnown RBP16.48■□□□□ 0.23
NCBP2-205ENST00000428425 JAK2O60674 1132 aa16.47■□□□□ 0.23
NCBP2-205ENST00000428425 ZNF445P59923 1031 aa16.47■□□□□ 0.23
NCBP2-205ENST00000428425 CHST3Q7LGC8 479 aa16.47■□□□□ 0.23
NCBP2-205ENST00000428425 BRF1Q92994 677 aa16.47■□□□□ 0.23
NCBP2-205ENST00000428425 E7EWF7 191 aa16.47■□□□□ 0.23
NCBP2-205ENST00000428425 VPS72Q15906 364 aa16.47■□□□□ 0.23
NCBP2-205ENST00000428425 CCDC102BQ68D86 513 aa16.47■□□□□ 0.23
NCBP2-205ENST00000428425 CDC37L1Q7L3B6 337 aa16.47■□□□□ 0.23
NCBP2-205ENST00000428425 ISY1Q9ULR0 285 aaKnown RBP16.47■□□□□ 0.23
NCBP2-205ENST00000428425 MYH7P12883 1935 aa16.47■□□□□ 0.23
NCBP2-205ENST00000428425 FGFR2P21802 821 aa16.46■□□□□ 0.23
NCBP2-205ENST00000428425 HAND2P61296 217 aa16.46■□□□□ 0.23
NCBP2-205ENST00000428425 ABCC12Q96J65 1359 aa16.46■□□□□ 0.23
NCBP2-205ENST00000428425 DNM1Q05193 864 aaKnown RBP16.46■□□□□ 0.23
NCBP2-205ENST00000428425 C3orf67Q6ZVT6 689 aa16.46■□□□□ 0.23
NCBP2-205ENST00000428425 FERMT3Q86UX7 667 aa16.46■□□□□ 0.23
NCBP2-205ENST00000428425 GTF3C6Q969F1 213 aa16.46■□□□□ 0.23
NCBP2-205ENST00000428425 GJD4Q96KN9 370 aaPredicted RBP16.46■□□□□ 0.23
NCBP2-205ENST00000428425 SYCE3A1L190 88 aa16.45■□□□□ 0.22
NCBP2-205ENST00000428425 FIBPO43427 364 aa16.45■□□□□ 0.22
NCBP2-205ENST00000428425 LARP1BQ659C4 914 aaKnown RBP16.45■□□□□ 0.22
NCBP2-205ENST00000428425 FAM173BQ6P4H8 233 aa16.45■□□□□ 0.22
NCBP2-205ENST00000428425 TICAM2Q86XR7 235 aa16.45■□□□□ 0.22
NCBP2-205ENST00000428425 APPBP2Q92624 585 aa16.45■□□□□ 0.22
NCBP2-205ENST00000428425 SMARCC1Q92922 1105 aaPredicted RBP16.45■□□□□ 0.22
NCBP2-205ENST00000428425 BCORQ6W2J9 1755 aa16.45■□□□□ 0.22
NCBP2-205ENST00000428425 HSP90B1P14625 803 aaKnown RBP16.45■□□□□ 0.22
NCBP2-205ENST00000428425 EXOSC10Q01780 885 aaKnown RBP16.45■□□□□ 0.22
NCBP2-205ENST00000428425 PUM3Q15397 648 aaKnown RBP16.45■□□□□ 0.22
NCBP2-205ENST00000428425 DHX32Q7L7V1 743 aaKnown RBP16.45■□□□□ 0.22
NCBP2-205ENST00000428425 MBD3O95983 291 aa16.44■□□□□ 0.22
NCBP2-205ENST00000428425 APOBRQ0VD83 1088 aa16.44■□□□□ 0.22
NCBP2-205ENST00000428425 SCRN1Q12765 414 aa16.44■□□□□ 0.22
NCBP2-205ENST00000428425 PARP10Q53GL7 1025 aa16.44■□□□□ 0.22
NCBP2-205ENST00000428425 TMEM87AQ8NBN3 555 aa16.44■□□□□ 0.22
NCBP2-205ENST00000428425 AK7Q96M32 723 aa16.44■□□□□ 0.22
NCBP2-205ENST00000428425 GPHNQ9NQX3 736 aaPredicted RBP16.44■□□□□ 0.22
NCBP2-205ENST00000428425 WWC3Q9ULE0 1092 aa16.44■□□□□ 0.22
NCBP2-205ENST00000428425 ARAP2Q8WZ64 1704 aa16.44■□□□□ 0.22
NCBP2-205ENST00000428425 MROH5Q6ZUA9 1318 aa16.44■□□□□ 0.22
NCBP2-205ENST00000428425 GPAA1O43292 621 aa16.43■□□□□ 0.22
NCBP2-205ENST00000428425 FGAP02671 866 aa16.43■□□□□ 0.22
NCBP2-205ENST00000428425 ZFYP08048 801 aaPredicted RBP16.43■□□□□ 0.22
NCBP2-205ENST00000428425 ARID4AP29374 1257 aaPredicted RBP16.43■□□□□ 0.22
NCBP2-205ENST00000428425 SLC9C2Q5TAH2 1124 aa16.43■□□□□ 0.22
NCBP2-205ENST00000428425 LPIN2Q92539 896 aa16.43■□□□□ 0.22
NCBP2-205ENST00000428425 ZNF512BQ96KM6 892 aaPredicted RBP16.43■□□□□ 0.22
NCBP2-205ENST00000428425 TAF1P21675 1872 aa16.43■□□□□ 0.22
NCBP2-205ENST00000428425 WTIPA6NIX2 430 aaPredicted RBP16.43■□□□□ 0.22
NCBP2-205ENST00000428425 IDH1O75874 414 aaKnown RBP16.43■□□□□ 0.22
NCBP2-205ENST00000428425 ADD2P35612 726 aa16.43■□□□□ 0.22
NCBP2-205ENST00000428425 MPHOSPH8Q99549 860 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms