RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 SLX4Q8IY92 1834 aa15.28■□□□□ 0.04
TRIM39-207ENST00000428404 DLEC1Q9Y238 1755 aa15.28■□□□□ 0.04
TRIM39-207ENST00000428404 SNED1Q8TER0 1413 aa15.27■□□□□ 0.04
TRIM39-207ENST00000428404 CCDC158Q5M9N0 1113 aa15.27■□□□□ 0.04
TRIM39-207ENST00000428404 GORABQ5T7V8 394 aa15.27■□□□□ 0.04
TRIM39-207ENST00000428404 CCDC102BQ68D86 513 aa15.27■□□□□ 0.04
TRIM39-207ENST00000428404 TBC1D16Q8TBP0 767 aa15.27■□□□□ 0.04
TRIM39-207ENST00000428404 FAM84BQ96KN1 310 aaPredicted RBP15.27■□□□□ 0.04
TRIM39-207ENST00000428404 GGA1Q9UJY5 639 aa15.27■□□□□ 0.04
TRIM39-207ENST00000428404 LTBP1Q14766 1721 aa15.26■□□□□ 0.03
TRIM39-207ENST00000428404 SDSP20132 328 aa15.26■□□□□ 0.03
TRIM39-207ENST00000428404 KLRK1P26718 216 aa15.26■□□□□ 0.03
TRIM39-207ENST00000428404 ARID4AP29374 1257 aaPredicted RBP15.26■□□□□ 0.03
TRIM39-207ENST00000428404 PHKA1P46020 1223 aa15.26■□□□□ 0.03
TRIM39-207ENST00000428404 KCNJ4P48050 445 aa15.26■□□□□ 0.03
TRIM39-207ENST00000428404 BCAMP50895 628 aa15.26■□□□□ 0.03
TRIM39-207ENST00000428404 GRIPAP1Q4V328 841 aa15.26■□□□□ 0.03
TRIM39-207ENST00000428404 MPNDQ8N594 471 aa15.26■□□□□ 0.03
TRIM39-207ENST00000428404 HAUS7Q99871 368 aa15.26■□□□□ 0.03
TRIM39-207ENST00000428404 RTFDC1Q9BY42 306 aaPredicted RBP15.26■□□□□ 0.03
TRIM39-207ENST00000428404 PPP1R1BQ9UD71 204 aaPredicted RBP15.26■□□□□ 0.03
TRIM39-207ENST00000428404 UFL1O94874 794 aa15.25■□□□□ 0.03
TRIM39-207ENST00000428404 GYG1P46976 350 aa15.25■□□□□ 0.03
TRIM39-207ENST00000428404 DALRD3Q5D0E6 543 aaKnown RBP15.25■□□□□ 0.03
TRIM39-207ENST00000428404 TTC39AQ5SRH9 613 aa15.25■□□□□ 0.03
TRIM39-207ENST00000428404 TXNRD3Q86VQ6 643 aa15.25■□□□□ 0.03
TRIM39-207ENST00000428404 TMX4Q9H1E5 349 aaPredicted RBP15.25■□□□□ 0.03
TRIM39-207ENST00000428404 BOLA2Q9H3K6 86 aa15.25■□□□□ 0.03
TRIM39-207ENST00000428404 ARAP2Q8WZ64 1704 aa15.25■□□□□ 0.03
TRIM39-207ENST00000428404 C21orf2O43822 256 aa15.24■□□□□ 0.03
TRIM39-207ENST00000428404 UQCRFS1P1P0C7P4 283 aa15.24■□□□□ 0.03
TRIM39-207ENST00000428404 SCARF1Q14162 830 aa15.24■□□□□ 0.03
TRIM39-207ENST00000428404 CAVIN4Q5BKX8 364 aa15.24■□□□□ 0.03
TRIM39-207ENST00000428404 DPP8Q6V1X1 898 aaPredicted RBP15.24■□□□□ 0.03
TRIM39-207ENST00000428404 NLGN2Q8NFZ4 835 aa15.24■□□□□ 0.03
TRIM39-207ENST00000428404 HIBADHP31937 336 aaKnown RBP15.23■□□□□ 0.03
TRIM39-207ENST00000428404 MCAMP43121 646 aa15.23■□□□□ 0.03
TRIM39-207ENST00000428404 RTKN2Q8IZC4 609 aa15.23■□□□□ 0.03
TRIM39-207ENST00000428404 FHDC1Q9C0D6 1143 aaPredicted RBP15.23■□□□□ 0.03
TRIM39-207ENST00000428404 DUOX1Q9NRD9 1551 aa15.23■□□□□ 0.03
TRIM39-207ENST00000428404 MED23Q9ULK4 1368 aa15.23■□□□□ 0.03
TRIM39-207ENST00000428404 C6orf229H3BNL8 230 aa15.22■□□□□ 0.03
TRIM39-207ENST00000428404 RASGRF1Q13972 1273 aa15.22■□□□□ 0.03
TRIM39-207ENST00000428404 CCDC93Q567U6 631 aa15.22■□□□□ 0.03
TRIM39-207ENST00000428404 SOGA3Q5TF21 947 aa15.22■□□□□ 0.03
TRIM39-207ENST00000428404 KLHL34Q8N239 644 aa15.22■□□□□ 0.03
TRIM39-207ENST00000428404 EVI5LQ96CN4 794 aa15.22■□□□□ 0.03
TRIM39-207ENST00000428404 GPR101Q96P66 508 aaPredicted RBP15.22■□□□□ 0.03
TRIM39-207ENST00000428404 GNL3LQ9NVN8 582 aaKnown RBP15.22■□□□□ 0.03
TRIM39-207ENST00000428404 HMG20BQ9P0W2 317 aa15.22■□□□□ 0.03
TRIM39-207ENST00000428404 ZNF219Q9P2Y4 722 aaPredicted RBP15.22■□□□□ 0.03
TRIM39-207ENST00000428404 BRCA1P38398 1863 aaKnown RBP15.21■□□□□ 0.03
TRIM39-207ENST00000428404 TRIM6-TRIM34B2RNG4 842 aa15.21■□□□□ 0.03
TRIM39-207ENST00000428404 SEMA3EO15041 775 aa15.21■□□□□ 0.03
TRIM39-207ENST00000428404 MAP4K4O95819 1239 aaPredicted RBP15.21■□□□□ 0.03
TRIM39-207ENST00000428404 C8orf34Q49A92 452 aa15.21■□□□□ 0.03
TRIM39-207ENST00000428404 PI16Q6UXB8 463 aa15.21■□□□□ 0.03
TRIM39-207ENST00000428404 TICAM2Q86XR7 235 aa15.21■□□□□ 0.03
TRIM39-207ENST00000428404 PELP1Q8IZL8 1130 aaKnown RBP15.21■□□□□ 0.03
TRIM39-207ENST00000428404 CNTROBQ8N137 903 aa15.21■□□□□ 0.03
TRIM39-207ENST00000428404 TDRD7Q8NHU6 1098 aaKnown RBP15.21■□□□□ 0.03
TRIM39-207ENST00000428404 PSMD1Q99460 953 aa15.21■□□□□ 0.03
TRIM39-207ENST00000428404 PDS5AQ29RF7 1337 aaKnown RBP15.2■□□□□ 0.02
TRIM39-207ENST00000428404 IL1R1P14778 569 aa15.2■□□□□ 0.02
TRIM39-207ENST00000428404 ZAP70P43403 619 aa15.2■□□□□ 0.02
TRIM39-207ENST00000428404 ZNF804AQ7Z570 1209 aa15.2■□□□□ 0.02
TRIM39-207ENST00000428404 VPS37DQ86XT2 251 aa15.2■□□□□ 0.02
TRIM39-207ENST00000428404 SPATA5Q8NB90 893 aa15.2■□□□□ 0.02
TRIM39-207ENST00000428404 EDC3Q96F86 508 aaKnown RBP15.2■□□□□ 0.02
TRIM39-207ENST00000428404 EYA3Q99504 573 aa15.2■□□□□ 0.02
TRIM39-207ENST00000428404 SYT17Q9BSW7 474 aa15.2■□□□□ 0.02
TRIM39-207ENST00000428404 SNRKQ9NRH2 765 aa15.2■□□□□ 0.02
TRIM39-207ENST00000428404 PAG1Q9NWQ8 432 aa15.2■□□□□ 0.02
TRIM39-207ENST00000428404 NDUFB9Q9Y6M9 179 aa15.2■□□□□ 0.02
TRIM39-207ENST00000428404 AKAP11Q9UKA4 1901 aa15.19■□□□□ 0.02
TRIM39-207ENST00000428404 CYP2E1P05181 493 aaPredicted RBP15.19■□□□□ 0.02
TRIM39-207ENST00000428404 WASHC4Q2M389 1173 aa15.19■□□□□ 0.02
TRIM39-207ENST00000428404 SUPT20HQ8NEM7 779 aa15.19■□□□□ 0.02
TRIM39-207ENST00000428404 RILPL2Q969X0 211 aa15.19■□□□□ 0.02
TRIM39-207ENST00000428404 DNAJC2Q99543 621 aaKnown RBP15.19■□□□□ 0.02
TRIM39-207ENST00000428404 ZC3H12CQ9C0D7 883 aaKnown RBP15.19■□□□□ 0.02
TRIM39-207ENST00000428404 CD209Q9NNX6 404 aa15.19■□□□□ 0.02
TRIM39-207ENST00000428404 DENND2AQ9ULE3 1009 aa15.19■□□□□ 0.02
TRIM39-207ENST00000428404 CACNA1SQ13698 1873 aa15.18■□□□□ 0.02
TRIM39-207ENST00000428404 GOLIM4O00461 696 aa15.18■□□□□ 0.02
TRIM39-207ENST00000428404 CDC45O75419 566 aa15.18■□□□□ 0.02
TRIM39-207ENST00000428404 FKBP4Q02790 459 aaKnown RBP eCLIP15.18■□□□□ 0.02
TRIM39-207ENST00000428404 TBC1D9Q6ZT07 1266 aa15.18■□□□□ 0.02
TRIM39-207ENST00000428404 KBTBD3Q8NAB2 608 aa15.18■□□□□ 0.02
TRIM39-207ENST00000428404 BACH2Q9BYV9 841 aa15.18■□□□□ 0.02
TRIM39-207ENST00000428404 COA1Q9GZY4 146 aa15.18■□□□□ 0.02
TRIM39-207ENST00000428404 VPS33BQ9H267 617 aa15.18■□□□□ 0.02
TRIM39-207ENST00000428404 ANTXR1Q9H6X2 564 aa15.18■□□□□ 0.02
TRIM39-207ENST00000428404 IQSEC3Q9UPP2 1182 aaPredicted RBP15.18■□□□□ 0.02
TRIM39-207ENST00000428404 BCS1LQ9Y276 419 aa15.18■□□□□ 0.02
TRIM39-207ENST00000428404 SRCAPQ6ZRS2 3230 aa15.18■□□□□ 0.02
TRIM39-207ENST00000428404 COL1A1P02452 1464 aaPredicted RBP15.17■□□□□ 0.02
TRIM39-207ENST00000428404 RIMBP2O15034 1052 aa15.17■□□□□ 0.02
TRIM39-207ENST00000428404 CHMLP26374 656 aa15.17■□□□□ 0.02
TRIM39-207ENST00000428404 KIAA2012Q0VF49 1180 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms