RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 DNAAF4Q8WXU2 420 aa22.25■■□□□ 1.15
DDR1-235ENST00000428153 COA1Q9GZY4 146 aa22.25■■□□□ 1.15
DDR1-235ENST00000428153 MRS2Q9HD23 443 aa22.25■■□□□ 1.15
DDR1-235ENST00000428153 MYOZ2Q9NPC6 264 aa22.25■■□□□ 1.15
DDR1-235ENST00000428153 FANCIQ9NVI1 1328 aa22.25■■□□□ 1.15
DDR1-235ENST00000428153 FAM155AB1AL88 458 aaPredicted RBP22.24■■□□□ 1.15
DDR1-235ENST00000428153 CSF1RP07333 972 aa22.24■■□□□ 1.15
DDR1-235ENST00000428153 ANKRD2Q9GZV1 360 aa22.24■■□□□ 1.15
DDR1-235ENST00000428153 CASP7P55210 303 aa22.23■■□□□ 1.15
DDR1-235ENST00000428153 FKBP5Q13451 457 aaPredicted RBP22.23■■□□□ 1.15
DDR1-235ENST00000428153 SCARF1Q14162 830 aa22.23■■□□□ 1.15
DDR1-235ENST00000428153 STRIP1Q5VSL9 837 aa22.23■■□□□ 1.15
DDR1-235ENST00000428153 ANGEL2Q5VTE6 544 aaKnown RBP22.23■■□□□ 1.15
DDR1-235ENST00000428153 DLK2Q6UY11 383 aa22.23■■□□□ 1.15
DDR1-235ENST00000428153 SAGE1Q9NXZ1 904 aa22.23■■□□□ 1.15
DDR1-235ENST00000428153 ANP32CO43423 234 aa22.22■■□□□ 1.15
DDR1-235ENST00000428153 VAMP4O75379 141 aa22.22■■□□□ 1.15
DDR1-235ENST00000428153 ITGA6P23229 1130 aa22.22■■□□□ 1.15
DDR1-235ENST00000428153 REM2Q8IYK8 340 aaPredicted RBP22.22■■□□□ 1.15
DDR1-235ENST00000428153 CDCA5Q96FF9 252 aa22.22■■□□□ 1.15
DDR1-235ENST00000428153 DACT2Q5SW24 774 aa22.21■■□□□ 1.15
DDR1-235ENST00000428153 OGFOD1Q8N543 542 aa22.21■■□□□ 1.15
DDR1-235ENST00000428153 MPHOSPH8Q99549 860 aa22.21■■□□□ 1.15
DDR1-235ENST00000428153 SPEF2Q9C093 1822 aa22.21■■□□□ 1.15
DDR1-235ENST00000428153 ZNF157P51786 506 aaPredicted RBP22.2■■□□□ 1.14
DDR1-235ENST00000428153 TSKSQ9UJT2 592 aa22.2■■□□□ 1.14
DDR1-235ENST00000428153 ZNF804BA4D1E1 1349 aa22.2■■□□□ 1.14
DDR1-235ENST00000428153 ASTN2O75129 1339 aaPredicted RBP22.2■■□□□ 1.14
DDR1-235ENST00000428153 SLC10A3P09131 477 aa22.19■■□□□ 1.14
DDR1-235ENST00000428153 ZIC5Q96T25 663 aa22.19■■□□□ 1.14
DDR1-235ENST00000428153 PAPPA2Q9BXP8 1791 aa22.19■■□□□ 1.14
DDR1-235ENST00000428153 ZNF646O15015 1829 aaPredicted RBP22.19■■□□□ 1.14
DDR1-235ENST00000428153 FAM161AQ3B820 660 aa22.18■■□□□ 1.14
DDR1-235ENST00000428153 WTIPA6NIX2 430 aaPredicted RBP22.17■■□□□ 1.14
DDR1-235ENST00000428153 KIF23Q02241 960 aaPredicted RBP22.17■■□□□ 1.14
DDR1-235ENST00000428153 CASP8AP2Q9UKL3 1982 aa22.17■■□□□ 1.14
DDR1-235ENST00000428153 ANKRD18BA2A2Z9 1011 aa22.16■■□□□ 1.14
DDR1-235ENST00000428153 EXOSC9Q06265 439 aaKnown RBP22.16■■□□□ 1.14
DDR1-235ENST00000428153 TTLL5Q6EMB2 1281 aa22.16■■□□□ 1.14
DDR1-235ENST00000428153 C15orf52Q6ZUT6 534 aaKnown RBP22.16■■□□□ 1.14
DDR1-235ENST00000428153 TXNRD3Q86VQ6 643 aa22.16■■□□□ 1.14
DDR1-235ENST00000428153 WNT10BO00744 389 aa22.15■■□□□ 1.14
DDR1-235ENST00000428153 BEND3Q5T5X7 828 aa22.15■■□□□ 1.14
DDR1-235ENST00000428153 ZNF316A6NFI3 1004 aaPredicted RBP22.14■■□□□ 1.13
DDR1-235ENST00000428153 CHRNDQ07001 517 aa22.14■■□□□ 1.13
DDR1-235ENST00000428153 NBPF9Q3BBW0 867 aa22.14■■□□□ 1.13
DDR1-235ENST00000428153 MCOLN1Q9GZU1 580 aa22.14■■□□□ 1.13
DDR1-235ENST00000428153 HDAC9Q9UKV0 1011 aa22.14■■□□□ 1.13
DDR1-235ENST00000428153 AKAP11Q9UKA4 1901 aa22.14■■□□□ 1.13
DDR1-235ENST00000428153 KCNJ4P48050 445 aa22.13■■□□□ 1.13
DDR1-235ENST00000428153 RGS19P49795 217 aa22.13■■□□□ 1.13
DDR1-235ENST00000428153 IFIT5Q13325 482 aaKnown RBP22.13■■□□□ 1.13
DDR1-235ENST00000428153 RASAL3Q86YV0 1011 aa22.13■■□□□ 1.13
DDR1-235ENST00000428153 CSRNP1Q96S65 589 aa22.13■■□□□ 1.13
DDR1-235ENST00000428153 NF2P35240 595 aa22.12■■□□□ 1.13
DDR1-235ENST00000428153 FOXO4P98177 505 aa22.12■■□□□ 1.13
DDR1-235ENST00000428153 CD209Q9NNX6 404 aa22.12■■□□□ 1.13
DDR1-235ENST00000428153 RNF186Q9NXI6 227 aa22.12■■□□□ 1.13
DDR1-235ENST00000428153 IRS2Q9Y4H2 1338 aa22.11■■□□□ 1.13
DDR1-235ENST00000428153 ZBED3Q96IU2 234 aaPredicted RBP22.11■■□□□ 1.13
DDR1-235ENST00000428153 MXD3Q9BW11 206 aa22.11■■□□□ 1.13
DDR1-235ENST00000428153 COL1A1P02452 1464 aaPredicted RBP22.1■■□□□ 1.13
DDR1-235ENST00000428153 CCDC85CA6NKD9 419 aa22.1■■□□□ 1.13
DDR1-235ENST00000428153 GRM8O00222 908 aa22.1■■□□□ 1.13
DDR1-235ENST00000428153 KLRK1P26718 216 aa22.1■■□□□ 1.13
DDR1-235ENST00000428153 DGKZQ13574 1117 aa22.1■■□□□ 1.13
DDR1-235ENST00000428153 APOBEC3FQ8IUX4 373 aaKnown RBP22.1■■□□□ 1.13
DDR1-235ENST00000428153 FBXW7Q969H0 707 aa22.1■■□□□ 1.13
DDR1-235ENST00000428153 SALL2Q9Y467 1007 aaPredicted RBP22.1■■□□□ 1.13
DDR1-235ENST00000428153 ALDH1L1O75891 902 aa22.09■■□□□ 1.13
DDR1-235ENST00000428153 FKBP1AP62942 108 aaKnown RBP22.09■■□□□ 1.13
DDR1-235ENST00000428153 GTF2IP78347 998 aa22.09■■□□□ 1.13
DDR1-235ENST00000428153 MTMR14Q8NCE2 650 aa22.09■■□□□ 1.13
DDR1-235ENST00000428153 SPINK5Q9NQ38 1064 aaPredicted RBP22.09■■□□□ 1.13
DDR1-235ENST00000428153 F6X3S4 739 aa22.08■■□□□ 1.13
DDR1-235ENST00000428153 TRPA1O75762 1119 aa22.08■■□□□ 1.13
DDR1-235ENST00000428153 IL1R1P14778 569 aa22.08■■□□□ 1.13
DDR1-235ENST00000428153 KIAA0825Q8IV33 1275 aa22.08■■□□□ 1.13
DDR1-235ENST00000428153 A0A1B0GUL6 1792 aa22.07■■□□□ 1.12
DDR1-235ENST00000428153 CCDC57Q2TAC2 916 aa22.07■■□□□ 1.12
DDR1-235ENST00000428153 LMBR1LQ6UX01 489 aa22.07■■□□□ 1.12
DDR1-235ENST00000428153 ZNF804AQ7Z570 1209 aa22.07■■□□□ 1.12
DDR1-235ENST00000428153 CHMP3Q9Y3E7 222 aa22.06■■□□□ 1.12
DDR1-235ENST00000428153 UBE2Q2LH0YL09 131 aa22.05■■□□□ 1.12
DDR1-235ENST00000428153 TAF5LO75529 589 aa22.05■■□□□ 1.12
DDR1-235ENST00000428153 SASH1O94885 1247 aa22.05■■□□□ 1.12
DDR1-235ENST00000428153 LDHAL6AQ6ZMR3 332 aa22.05■■□□□ 1.12
DDR1-235ENST00000428153 ARMC9Q7Z3E5 817 aa22.05■■□□□ 1.12
DDR1-235ENST00000428153 C9orf78Q9NZ63 289 aaPredicted RBP22.05■■□□□ 1.12
DDR1-235ENST00000428153 PPP2R3BQ9Y5P8 575 aa22.05■■□□□ 1.12
DDR1-235ENST00000428153 TM4SF4P48230 202 aa22.04■■□□□ 1.12
DDR1-235ENST00000428153 MLLT1Q03111 559 aaPredicted RBP22.04■■□□□ 1.12
DDR1-235ENST00000428153 DLGAP5Q15398 846 aa22.04■■□□□ 1.12
DDR1-235ENST00000428153 NOM1Q5C9Z4 860 aaKnown RBP22.04■■□□□ 1.12
DDR1-235ENST00000428153 PRAMEF18Q5VWM3 479 aa22.04■■□□□ 1.12
DDR1-235ENST00000428153 SRCIN1Q9C0H9 1055 aa22.04■■□□□ 1.12
DDR1-235ENST00000428153 ZNF521Q96K83 1311 aa22.04■■□□□ 1.12
DDR1-235ENST00000428153 TTLL12Q14166 644 aaPredicted RBP22.03■■□□□ 1.12
DDR1-235ENST00000428153 TAF7LQ5H9L4 462 aa22.03■■□□□ 1.12
DDR1-235ENST00000428153 EPHA10Q5JZY3 1008 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms