RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.21□□□□□ -0.78
SH3D19-204ENST00000427414 JARID2Q92833 1246 aaPredicted RBP10.21□□□□□ -0.78
SH3D19-204ENST00000427414 XAGE2Q96GT9 111 aa10.21□□□□□ -0.78
SH3D19-204ENST00000427414 FSD1Q9BTV5 496 aa10.21□□□□□ -0.78
SH3D19-204ENST00000427414 ANKRD2Q9GZV1 360 aa10.21□□□□□ -0.78
SH3D19-204ENST00000427414 RPAP1Q9BWH6 1393 aaPredicted RBP10.21□□□□□ -0.78
SH3D19-204ENST00000427414 CCDC171Q6TFL3 1326 aa10.2□□□□□ -0.78
SH3D19-204ENST00000427414 IFIT1P09914 478 aaKnown RBP10.2□□□□□ -0.78
SH3D19-204ENST00000427414 MCMDC2Q4G0Z9 681 aa10.2□□□□□ -0.78
SH3D19-204ENST00000427414 NLRP3Q96P20 1036 aa10.2□□□□□ -0.78
SH3D19-204ENST00000427414 MPHOSPH8Q99549 860 aa10.2□□□□□ -0.78
SH3D19-204ENST00000427414 DSCC1Q9BVC3 393 aa10.2□□□□□ -0.78
SH3D19-204ENST00000427414 TLR7Q9NYK1 1049 aaKnown RBP10.2□□□□□ -0.78
SH3D19-204ENST00000427414 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.2□□□□□ -0.78
SH3D19-204ENST00000427414 LRRC37AA6NMS7 1700 aa10.2□□□□□ -0.78
SH3D19-204ENST00000427414 CD2BP2O95400 341 aaKnown RBP10.2□□□□□ -0.78
SH3D19-204ENST00000427414 NECTIN1Q15223 517 aa10.2□□□□□ -0.78
SH3D19-204ENST00000427414 TTC39AQ5SRH9 613 aa10.2□□□□□ -0.78
SH3D19-204ENST00000427414 ZMYM1Q5SVZ6 1142 aa10.2□□□□□ -0.78
SH3D19-204ENST00000427414 C15orf52Q6ZUT6 534 aaKnown RBP10.2□□□□□ -0.78
SH3D19-204ENST00000427414 INTS4Q96HW7 963 aaKnown RBP10.2□□□□□ -0.78
SH3D19-204ENST00000427414 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.2□□□□□ -0.78
SH3D19-204ENST00000427414 BOLA2Q9H3K6 86 aa10.2□□□□□ -0.78
SH3D19-204ENST00000427414 U3KPZ7 1027 aaPredicted RBP10.2□□□□□ -0.78
SH3D19-204ENST00000427414 KLRG2A4D1S0 409 aaPredicted RBP10.2□□□□□ -0.78
SH3D19-204ENST00000427414 PSMA5P28066 241 aa10.2□□□□□ -0.78
SH3D19-204ENST00000427414 TM4SF1P30408 202 aa10.2□□□□□ -0.78
SH3D19-204ENST00000427414 TSHZ3Q63HK5 1081 aa10.2□□□□□ -0.78
SH3D19-204ENST00000427414 TBC1D9BQ66K14 1250 aa10.2□□□□□ -0.78
SH3D19-204ENST00000427414 ANKRD18AQ8IVF6 992 aa10.2□□□□□ -0.78
SH3D19-204ENST00000427414 PUS3Q9BZE2 481 aaKnown RBP10.2□□□□□ -0.78
SH3D19-204ENST00000427414 ANO2Q9NQ90 1003 aa10.2□□□□□ -0.78
SH3D19-204ENST00000427414 FAM13BQ9NYF5 915 aa10.2□□□□□ -0.78
SH3D19-204ENST00000427414 ZMYM6O95789 1325 aa10.19□□□□□ -0.78
SH3D19-204ENST00000427414 KLHL40Q2TBA0 621 aa10.19□□□□□ -0.78
SH3D19-204ENST00000427414 HOMEZQ8IX15 550 aa10.19□□□□□ -0.78
SH3D19-204ENST00000427414 ZNF594Q96JF6 807 aaPredicted RBP10.19□□□□□ -0.78
SH3D19-204ENST00000427414 R3HCC1Q9Y3T6 440 aaKnown RBP10.19□□□□□ -0.78
SH3D19-204ENST00000427414 ZNF804BA4D1E1 1349 aa10.19□□□□□ -0.78
SH3D19-204ENST00000427414 RNF113AO15541 343 aaKnown RBP10.19□□□□□ -0.78
SH3D19-204ENST00000427414 ZKSCAN1P17029 563 aaPredicted RBP10.19□□□□□ -0.78
SH3D19-204ENST00000427414 NCLP19338 710 aaKnown RBP10.19□□□□□ -0.78
SH3D19-204ENST00000427414 UBE3CQ15386 1083 aa10.19□□□□□ -0.78
SH3D19-204ENST00000427414 CHMP4CQ96CF2 233 aa10.19□□□□□ -0.78
SH3D19-204ENST00000427414 NEUROD6Q96NK8 337 aa10.19□□□□□ -0.78
SH3D19-204ENST00000427414 MAST2Q6P0Q8 1798 aa10.18□□□□□ -0.78
SH3D19-204ENST00000427414 NT5C2P49902 561 aa10.18□□□□□ -0.78
SH3D19-204ENST00000427414 NMIQ13287 307 aaPredicted RBP10.18□□□□□ -0.78
SH3D19-204ENST00000427414 GORABQ5T7V8 394 aa10.18□□□□□ -0.78
SH3D19-204ENST00000427414 NBPF5PQ86XG9 351 aaPredicted RBP10.18□□□□□ -0.78
SH3D19-204ENST00000427414 AKT1S1Q96B36 256 aa10.18□□□□□ -0.78
SH3D19-204ENST00000427414 LRRC4BQ9NT99 713 aa10.18□□□□□ -0.78
SH3D19-204ENST00000427414 HMGB1P09429 215 aaKnown RBP10.18□□□□□ -0.78
SH3D19-204ENST00000427414 TIMM10P62072 90 aa10.18□□□□□ -0.78
SH3D19-204ENST00000427414 CUL4AQ13619 759 aa10.18□□□□□ -0.78
SH3D19-204ENST00000427414 TXNRD1Q16881 649 aa10.18□□□□□ -0.78
SH3D19-204ENST00000427414 ERFEQ4G0M1 354 aa10.18□□□□□ -0.78
SH3D19-204ENST00000427414 CWC27Q6UX04 472 aaKnown RBP10.18□□□□□ -0.78
SH3D19-204ENST00000427414 PTF1AQ7RTS3 328 aa10.18□□□□□ -0.78
SH3D19-204ENST00000427414 FBXL16Q8N461 479 aa10.18□□□□□ -0.78
SH3D19-204ENST00000427414 TAF5LO75529 589 aa10.17□□□□□ -0.78
SH3D19-204ENST00000427414 BAG4O95429 457 aaKnown RBP10.17□□□□□ -0.78
SH3D19-204ENST00000427414 TERF1P54274 439 aa10.17□□□□□ -0.78
SH3D19-204ENST00000427414 ANKRD1Q15327 319 aa10.17□□□□□ -0.78
SH3D19-204ENST00000427414 CRY2Q49AN0 593 aa10.17□□□□□ -0.78
SH3D19-204ENST00000427414 CLEC17AQ6ZS10 378 aa10.17□□□□□ -0.78
SH3D19-204ENST00000427414 ZSCAN31Q96LW9 406 aaPredicted RBP10.17□□□□□ -0.78
SH3D19-204ENST00000427414 GNL3LQ9NVN8 582 aaKnown RBP10.17□□□□□ -0.78
SH3D19-204ENST00000427414 CTNNA3Q9UI47 895 aa10.17□□□□□ -0.78
SH3D19-204ENST00000427414 HCLS1P14317 486 aaPredicted RBP10.17□□□□□ -0.78
SH3D19-204ENST00000427414 HOXA10P31260 410 aaPredicted RBP10.17□□□□□ -0.78
SH3D19-204ENST00000427414 VPS53Q5VIR6 699 aa10.17□□□□□ -0.78
SH3D19-204ENST00000427414 NLGN1Q8N2Q7 840 aa10.17□□□□□ -0.78
SH3D19-204ENST00000427414 APPBP2Q92624 585 aa10.17□□□□□ -0.78
SH3D19-204ENST00000427414 ZSWIM6Q9HCJ5 1215 aa10.17□□□□□ -0.78
SH3D19-204ENST00000427414 LAMA4Q16363 1823 aa10.16□□□□□ -0.78
SH3D19-204ENST00000427414 TNRC6CQ9HCJ0 1690 aaKnown RBP10.16□□□□□ -0.78
SH3D19-204ENST00000427414 ST5P78524 1137 aa10.16□□□□□ -0.78
SH3D19-204ENST00000427414 SYNE4Q8N205 404 aa10.16□□□□□ -0.78
SH3D19-204ENST00000427414 RGS22Q8NE09 1264 aa10.16□□□□□ -0.78
SH3D19-204ENST00000427414 LEMD3Q9Y2U8 911 aa10.16□□□□□ -0.78
SH3D19-204ENST00000427414 SNX14Q9Y5W7 946 aa10.16□□□□□ -0.78
SH3D19-204ENST00000427414 WDR19Q8NEZ3 1342 aa10.16□□□□□ -0.78
SH3D19-204ENST00000427414 GYS1P13807 737 aa10.16□□□□□ -0.78
SH3D19-204ENST00000427414 GTF2E1P29083 439 aaPredicted RBP10.16□□□□□ -0.78
SH3D19-204ENST00000427414 RPS8P62241 208 aaKnown RBP10.16□□□□□ -0.78
SH3D19-204ENST00000427414 MCTP1Q6DN14 999 aa10.16□□□□□ -0.78
SH3D19-204ENST00000427414 CAVIN1Q6NZI2 390 aaKnown RBP10.16□□□□□ -0.78
SH3D19-204ENST00000427414 CRAMP1Q96RY5 1269 aa10.16□□□□□ -0.78
SH3D19-204ENST00000427414 MAP7D2Q96T17 732 aa10.16□□□□□ -0.78
SH3D19-204ENST00000427414 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.15□□□□□ -0.78
SH3D19-204ENST00000427414 CHRNDQ07001 517 aa10.15□□□□□ -0.78
SH3D19-204ENST00000427414 NFIXQ14938 502 aa10.15□□□□□ -0.78
SH3D19-204ENST00000427414 ALX1Q15699 326 aa10.15□□□□□ -0.78
SH3D19-204ENST00000427414 CCDC102BQ68D86 513 aa10.15□□□□□ -0.78
SH3D19-204ENST00000427414 DDX46Q7L014 1031 aaKnown RBP10.15□□□□□ -0.78
SH3D19-204ENST00000427414 TTC14Q96N46 770 aa10.15□□□□□ -0.78
SH3D19-204ENST00000427414 SH2B1Q9NRF2 756 aaPredicted RBP10.15□□□□□ -0.78
SH3D19-204ENST00000427414 A0A0D9SFI3 127 aa10.15□□□□□ -0.78
SH3D19-204ENST00000427414 BBOX1O75936 387 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms