RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 GPHNQ9NQX3 736 aaPredicted RBP8.69□□□□□ -1.02
LINC01108-201ENST00000427276 A0A0G2JLW4 131 aa8.69□□□□□ -1.02
LINC01108-201ENST00000427276 ATP5J2-PTCD1G3V325 749 aa8.69□□□□□ -1.02
LINC01108-201ENST00000427276 PTCD1O75127 700 aaKnown RBP8.69□□□□□ -1.02
LINC01108-201ENST00000427276 HMGB1P09429 215 aaKnown RBP8.69□□□□□ -1.02
LINC01108-201ENST00000427276 ATP2B1P20020 1258 aa8.69□□□□□ -1.02
LINC01108-201ENST00000427276 ST5P78524 1137 aa8.69□□□□□ -1.02
LINC01108-201ENST00000427276 TFCP2Q12800 502 aa8.69□□□□□ -1.02
LINC01108-201ENST00000427276 KARSQ15046 597 aaKnown RBP8.69□□□□□ -1.02
LINC01108-201ENST00000427276 HSP90AB3PQ58FF7 597 aa8.69□□□□□ -1.02
LINC01108-201ENST00000427276 DBNDD2Q9BQY9 259 aa8.69□□□□□ -1.02
LINC01108-201ENST00000427276 HMG20BQ9P0W2 317 aa8.69□□□□□ -1.02
LINC01108-201ENST00000427276 ARHGEF10O15013 1369 aa8.69□□□□□ -1.02
LINC01108-201ENST00000427276 IGSF1Q8N6C5 1336 aa8.69□□□□□ -1.02
LINC01108-201ENST00000427276 CDC25BP30305 580 aa8.69□□□□□ -1.02
LINC01108-201ENST00000427276 GPS2Q13227 327 aa8.69□□□□□ -1.02
LINC01108-201ENST00000427276 MCM6Q14566 821 aa8.69□□□□□ -1.02
LINC01108-201ENST00000427276 IL17RAQ96F46 866 aa8.69□□□□□ -1.02
LINC01108-201ENST00000427276 HDAC5Q9UQL6 1122 aa8.69□□□□□ -1.02
LINC01108-201ENST00000427276 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.69□□□□□ -1.02
LINC01108-201ENST00000427276 CLIC4Q9Y696 253 aa8.69□□□□□ -1.02
LINC01108-201ENST00000427276 ROBO2Q9HCK4 1378 aa8.68□□□□□ -1.02
LINC01108-201ENST00000427276 DIP2CQ9Y2E4 1556 aa8.68□□□□□ -1.02
LINC01108-201ENST00000427276 DDX58O95786 925 aaKnown RBP8.68□□□□□ -1.02
LINC01108-201ENST00000427276 OAS2P29728 719 aaKnown RBP8.68□□□□□ -1.02
LINC01108-201ENST00000427276 WASHC4Q2M389 1173 aa8.68□□□□□ -1.02
LINC01108-201ENST00000427276 KSR2Q6VAB6 950 aa8.68□□□□□ -1.02
LINC01108-201ENST00000427276 CNPY4Q8N129 248 aa8.68□□□□□ -1.02
LINC01108-201ENST00000427276 CCDC150Q8NCX0 1101 aa8.68□□□□□ -1.02
LINC01108-201ENST00000427276 NSUN7Q8NE18 718 aaKnown RBP8.68□□□□□ -1.02
LINC01108-201ENST00000427276 C8orf76Q96K31 380 aa8.68□□□□□ -1.02
LINC01108-201ENST00000427276 TOP1P11387 765 aaKnown RBP8.68□□□□□ -1.02
LINC01108-201ENST00000427276 FANCCQ00597 558 aa8.68□□□□□ -1.02
LINC01108-201ENST00000427276 SARM1Q6SZW1 724 aa8.68□□□□□ -1.02
LINC01108-201ENST00000427276 RBM43Q6ZSC3 357 aaKnown RBP8.68□□□□□ -1.02
LINC01108-201ENST00000427276 UBE3BQ7Z3V4 1068 aa8.68□□□□□ -1.02
LINC01108-201ENST00000427276 CCDC191Q8NCU4 936 aa8.68□□□□□ -1.02
LINC01108-201ENST00000427276 CPLX3Q8WVH0 158 aa8.68□□□□□ -1.02
LINC01108-201ENST00000427276 SNRKQ9NRH2 765 aa8.68□□□□□ -1.02
LINC01108-201ENST00000427276 ZNF330Q9Y3S2 320 aaPredicted RBP8.68□□□□□ -1.02
LINC01108-201ENST00000427276 U3KPZ7 1027 aaPredicted RBP8.68□□□□□ -1.02
LINC01108-201ENST00000427276 SBNO1A3KN83 1393 aa8.68□□□□□ -1.02
LINC01108-201ENST00000427276 PHACTR2O75167 634 aa8.67□□□□□ -1.02
LINC01108-201ENST00000427276 RXRAP19793 462 aa8.67□□□□□ -1.02
LINC01108-201ENST00000427276 PLA2G4AP47712 749 aa8.67□□□□□ -1.02
LINC01108-201ENST00000427276 ETF1P62495 437 aaKnown RBP8.67□□□□□ -1.02
LINC01108-201ENST00000427276 FKBP4Q02790 459 aaKnown RBP eCLIP8.67□□□□□ -1.02
LINC01108-201ENST00000427276 NBPF11Q86T75 865 aa8.67□□□□□ -1.02
LINC01108-201ENST00000427276 CCDC85AQ96PX6 553 aaPredicted RBP8.67□□□□□ -1.02
LINC01108-201ENST00000427276 KIAA1468Q9P260 1216 aa8.67□□□□□ -1.02
LINC01108-201ENST00000427276 RCOR1Q9UKL0 485 aa8.67□□□□□ -1.02
LINC01108-201ENST00000427276 FHOD1Q9Y613 1164 aa8.67□□□□□ -1.02
LINC01108-201ENST00000427276 CASQ1P31415 396 aa8.67□□□□□ -1.02
LINC01108-201ENST00000427276 MCMDC2Q4G0Z9 681 aa8.67□□□□□ -1.02
LINC01108-201ENST00000427276 SPECC1Q5M775 1068 aa8.67□□□□□ -1.02
LINC01108-201ENST00000427276 NBPF6Q5VWK0 638 aa8.67□□□□□ -1.02
LINC01108-201ENST00000427276 DHX32Q7L7V1 743 aaKnown RBP8.67□□□□□ -1.02
LINC01108-201ENST00000427276 NBPF4Q96M43 638 aa8.67□□□□□ -1.02
LINC01108-201ENST00000427276 PUF60Q9UHX1 559 aaKnown RBP8.67□□□□□ -1.02
LINC01108-201ENST00000427276 AMOTL2Q9Y2J4 779 aa8.67□□□□□ -1.02
LINC01108-201ENST00000427276 SPTLC2O15270 562 aa8.67□□□□□ -1.02
LINC01108-201ENST00000427276 ZNF202O95125 648 aa8.67□□□□□ -1.02
LINC01108-201ENST00000427276 TIMM10P62072 90 aa8.67□□□□□ -1.02
LINC01108-201ENST00000427276 STOX1Q6ZVD7 989 aa8.67□□□□□ -1.02
LINC01108-201ENST00000427276 SMARCE1Q969G3 411 aa8.67□□□□□ -1.02
LINC01108-201ENST00000427276 DESI2Q9BSY9 194 aa8.67□□□□□ -1.02
LINC01108-201ENST00000427276 ORC3Q9UBD5 711 aaPredicted RBP8.67□□□□□ -1.02
LINC01108-201ENST00000427276 DBNLQ9UJU6 430 aaKnown RBP8.67□□□□□ -1.02
LINC01108-201ENST00000427276 PREX1Q8TCU6 1659 aa8.67□□□□□ -1.02
LINC01108-201ENST00000427276 ADCY9O60503 1353 aa8.67□□□□□ -1.02
LINC01108-201ENST00000427276 CEP170BQ9Y4F5 1589 aaPredicted RBP8.66□□□□□ -1.02
LINC01108-201ENST00000427276 CAPN2P17655 700 aa8.66□□□□□ -1.02
LINC01108-201ENST00000427276 ADKP55263 362 aaKnown RBP8.66□□□□□ -1.02
LINC01108-201ENST00000427276 RAD51AP2Q09MP3 1159 aa8.66□□□□□ -1.02
LINC01108-201ENST00000427276 EPHA10Q5JZY3 1008 aa8.66□□□□□ -1.02
LINC01108-201ENST00000427276 DPF2Q92785 391 aa8.66□□□□□ -1.02
LINC01108-201ENST00000427276 RNF216Q9NWF9 866 aaPredicted RBP8.66□□□□□ -1.02
LINC01108-201ENST00000427276 PLEKHG3A1L390 1219 aa8.66□□□□□ -1.02
LINC01108-201ENST00000427276 TMEM232C9JQI7 657 aa8.66□□□□□ -1.02
LINC01108-201ENST00000427276 ANKRD65E5RJM6 399 aa8.66□□□□□ -1.02
LINC01108-201ENST00000427276 CYP2C19P33261 490 aa8.66□□□□□ -1.02
LINC01108-201ENST00000427276 CEBPAP49715 358 aaPredicted RBP8.66□□□□□ -1.02
LINC01108-201ENST00000427276 SMC1AQ14683 1233 aaKnown RBP8.66□□□□□ -1.02
LINC01108-201ENST00000427276 OLFM4Q6UX06 510 aa8.66□□□□□ -1.02
LINC01108-201ENST00000427276 LINS1Q8NG48 757 aa8.66□□□□□ -1.02
LINC01108-201ENST00000427276 CCDC12Q8WUD4 166 aaPredicted RBP8.66□□□□□ -1.02
LINC01108-201ENST00000427276 LZTFL1Q9NQ48 299 aa8.66□□□□□ -1.02
LINC01108-201ENST00000427276 USP6P35125 1406 aa8.66□□□□□ -1.02
LINC01108-201ENST00000427276 GOLGA8BA8MQT2 603 aa8.65□□□□□ -1.02
LINC01108-201ENST00000427276 TRIM66O15016 1216 aa8.65□□□□□ -1.02
LINC01108-201ENST00000427276 COPS6Q7L5N1 327 aa8.65□□□□□ -1.02
LINC01108-201ENST00000427276 CERKQ8TCT0 537 aa8.65□□□□□ -1.02
LINC01108-201ENST00000427276 XAGE3Q8WTP9 111 aa8.65□□□□□ -1.02
LINC01108-201ENST00000427276 ARFGAP3Q9NP61 516 aa8.65□□□□□ -1.02
LINC01108-201ENST00000427276 KLF18A0A0U1RQI7 1052 aa8.65□□□□□ -1.02
LINC01108-201ENST00000427276 ALDH1L1O75891 902 aa8.65□□□□□ -1.02
LINC01108-201ENST00000427276 CTDNEP1O95476 244 aa8.65□□□□□ -1.02
LINC01108-201ENST00000427276 ADD1P35611 737 aaKnown RBP8.65□□□□□ -1.02
LINC01108-201ENST00000427276 MTX1Q13505 466 aa8.65□□□□□ -1.02
LINC01108-201ENST00000427276 PNOCQ13519 176 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms