RNA–Protein interactions for RNA: ENST00000427214.5

DDX39B-207, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-207ENST00000427214 DDNO94850 711 aaPredicted RBP8.62□□□□□ -1.03
DDX39B-207ENST00000427214 OSBPP22059 807 aa8.62□□□□□ -1.03
DDX39B-207ENST00000427214 PRSS12P56730 875 aa8.62□□□□□ -1.03
DDX39B-207ENST00000427214 C16orf71Q8IYS4 520 aaPredicted RBP8.62□□□□□ -1.03
DDX39B-207ENST00000427214 RTKN2Q8IZC4 609 aa8.62□□□□□ -1.03
DDX39B-207ENST00000427214 CDCA7LQ96GN5 454 aa8.62□□□□□ -1.03
DDX39B-207ENST00000427214 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.62□□□□□ -1.03
DDX39B-207ENST00000427214 ANKRD36CQ5JPF3 1778 aa8.62□□□□□ -1.03
DDX39B-207ENST00000427214 IL16Q14005 1332 aa8.61□□□□□ -1.03
DDX39B-207ENST00000427214 ZNF541Q9H0D2 1346 aa8.61□□□□□ -1.03
DDX39B-207ENST00000427214 DICER1Q9UPY3 1922 aaKnown RBP8.61□□□□□ -1.03
DDX39B-207ENST00000427214 RGS20O76081 388 aa8.61□□□□□ -1.03
DDX39B-207ENST00000427214 ITGBL1O95965 494 aaPredicted RBP8.61□□□□□ -1.03
DDX39B-207ENST00000427214 VEGFAP15692 232 aaPredicted RBP8.61□□□□□ -1.03
DDX39B-207ENST00000427214 IARSP41252 1262 aaKnown RBP8.61□□□□□ -1.03
DDX39B-207ENST00000427214 RTL5Q5HYW3 569 aaPredicted RBP8.61□□□□□ -1.03
DDX39B-207ENST00000427214 CC2D2BQ6DHV5 1058 aa8.61□□□□□ -1.03
DDX39B-207ENST00000427214 FAM89AQ96GI7 184 aa8.61□□□□□ -1.03
DDX39B-207ENST00000427214 PSMD1Q99460 953 aa8.61□□□□□ -1.03
DDX39B-207ENST00000427214 COL4A5P29400 1685 aa8.61□□□□□ -1.03
DDX39B-207ENST00000427214 HTRA3P83110 453 aa8.6□□□□□ -1.03
DDX39B-207ENST00000427214 TRIM28Q13263 835 aaKnown RBP8.6□□□□□ -1.03
DDX39B-207ENST00000427214 TWISTNBQ3B726 338 aaPredicted RBP8.6□□□□□ -1.03
DDX39B-207ENST00000427214 CCDC30Q5VVM6 783 aa8.6□□□□□ -1.03
DDX39B-207ENST00000427214 G2E3Q7L622 706 aa8.6□□□□□ -1.03
DDX39B-207ENST00000427214 RIC3Q7Z5B4 369 aa8.6□□□□□ -1.03
DDX39B-207ENST00000427214 FAM9BQ8IZU0 186 aa8.6□□□□□ -1.03
DDX39B-207ENST00000427214 LRCH3Q96II8 777 aa8.6□□□□□ -1.03
DDX39B-207ENST00000427214 MYD88Q99836 296 aa8.6□□□□□ -1.03
DDX39B-207ENST00000427214 FAM198AQ9UFP1 575 aa8.6□□□□□ -1.03
DDX39B-207ENST00000427214 TSR3Q9UJK0 312 aaKnown RBP8.6□□□□□ -1.03
DDX39B-207ENST00000427214 WDR90Q96KV7 1748 aa8.6□□□□□ -1.03
DDX39B-207ENST00000427214 FANCIQ9NVI1 1328 aa8.59□□□□□ -1.03
DDX39B-207ENST00000427214 LAMB2P55268 1798 aa8.59□□□□□ -1.03
DDX39B-207ENST00000427214 FZD9O00144 591 aa8.59□□□□□ -1.03
DDX39B-207ENST00000427214 FSTL1Q12841 308 aa8.59□□□□□ -1.03
DDX39B-207ENST00000427214 SMC1BQ8NDV3 1235 aa8.59□□□□□ -1.03
DDX39B-207ENST00000427214 JARID2Q92833 1246 aaPredicted RBP8.59□□□□□ -1.03
DDX39B-207ENST00000427214 TSHZ2Q9NRE2 1034 aa8.59□□□□□ -1.03
DDX39B-207ENST00000427214 ATP6V0A2Q9Y487 856 aa8.59□□□□□ -1.03
DDX39B-207ENST00000427214 COL4A1P02462 1669 aa8.59□□□□□ -1.03
DDX39B-207ENST00000427214 DDX60Q8IY21 1712 aaKnown RBP8.58□□□□□ -1.04
DDX39B-207ENST00000427214 PI4KAP2A4QPH2 592 aa8.58□□□□□ -1.04
DDX39B-207ENST00000427214 IRS4O14654 1257 aaPredicted RBP8.58□□□□□ -1.04
DDX39B-207ENST00000427214 BBOX1O75936 387 aa8.58□□□□□ -1.04
DDX39B-207ENST00000427214 IGKV5-2P06315 115 aa8.58□□□□□ -1.04
DDX39B-207ENST00000427214 APLP1P51693 650 aa8.58□□□□□ -1.04
DDX39B-207ENST00000427214 GRAPQ13588 217 aa8.58□□□□□ -1.04
DDX39B-207ENST00000427214 SF3B3Q15393 1217 aaKnown RBP8.58□□□□□ -1.04
DDX39B-207ENST00000427214 DDX46Q7L014 1031 aaKnown RBP8.58□□□□□ -1.04
DDX39B-207ENST00000427214 WDR63Q8IWG1 891 aa8.58□□□□□ -1.04
DDX39B-207ENST00000427214 SP8Q8IXZ3 490 aa8.58□□□□□ -1.04
DDX39B-207ENST00000427214 LARGE2Q8N3Y3 721 aa8.58□□□□□ -1.04
DDX39B-207ENST00000427214 PI4KAP1Q8N8J0 262 aa8.58□□□□□ -1.04
DDX39B-207ENST00000427214 ZBTB38Q8NAP3 1195 aaPredicted RBP8.58□□□□□ -1.04
DDX39B-207ENST00000427214 GRAPLQ8TC17 118 aaPredicted RBP8.58□□□□□ -1.04
DDX39B-207ENST00000427214 CELF1Q92879 486 aaKnown RBP8.58□□□□□ -1.04
DDX39B-207ENST00000427214 METTL22Q9BUU2 404 aaPredicted RBP8.58□□□□□ -1.04
DDX39B-207ENST00000427214 HPS5Q9UPZ3 1129 aa8.58□□□□□ -1.04
DDX39B-207ENST00000427214 MAP3K2Q9Y2U5 619 aa8.58□□□□□ -1.04
DDX39B-207ENST00000427214 TAF1P21675 1872 aa8.57□□□□□ -1.04
DDX39B-207ENST00000427214 SMAPO00193 183 aa8.57□□□□□ -1.04
DDX39B-207ENST00000427214 VAMP4O75379 141 aa8.57□□□□□ -1.04
DDX39B-207ENST00000427214 DDX58O95786 925 aaKnown RBP8.57□□□□□ -1.04
DDX39B-207ENST00000427214 EXOSC9Q06265 439 aaKnown RBP8.57□□□□□ -1.04
DDX39B-207ENST00000427214 AOC3Q16853 763 aa8.57□□□□□ -1.04
DDX39B-207ENST00000427214 GRIPAP1Q4V328 841 aa8.57□□□□□ -1.04
DDX39B-207ENST00000427214 KSR2Q6VAB6 950 aa8.57□□□□□ -1.04
DDX39B-207ENST00000427214 DNAJC5GQ8N7S2 189 aa8.57□□□□□ -1.04
DDX39B-207ENST00000427214 CCDC191Q8NCU4 936 aa8.57□□□□□ -1.04
DDX39B-207ENST00000427214 JDP2Q8WYK2 163 aa8.57□□□□□ -1.04
DDX39B-207ENST00000427214 TATDN2Q93075 761 aa8.57□□□□□ -1.04
DDX39B-207ENST00000427214 STK31Q9BXU1 1019 aa8.57□□□□□ -1.04
DDX39B-207ENST00000427214 RTFDC1Q9BY42 306 aaPredicted RBP8.57□□□□□ -1.04
DDX39B-207ENST00000427214 TAF1DQ9H5J8 278 aaPredicted RBP8.57□□□□□ -1.04
DDX39B-207ENST00000427214 CDHR5Q9HBB8 845 aa8.57□□□□□ -1.04
DDX39B-207ENST00000427214 C3orf80F5H4A9 247 aa8.56□□□□□ -1.04
DDX39B-207ENST00000427214 PPIP5K2O43314 1243 aa8.56□□□□□ -1.04
DDX39B-207ENST00000427214 PCCAP05165 728 aaPredicted RBP8.56□□□□□ -1.04
DDX39B-207ENST00000427214 CWF19L2Q2TBE0 894 aaKnown RBP8.56□□□□□ -1.04
DDX39B-207ENST00000427214 DPP8Q6V1X1 898 aaPredicted RBP8.56□□□□□ -1.04
DDX39B-207ENST00000427214 GPC2Q8N158 579 aa8.56□□□□□ -1.04
DDX39B-207ENST00000427214 MPNDQ8N594 471 aa8.56□□□□□ -1.04
DDX39B-207ENST00000427214 CCDC85AQ96PX6 553 aaPredicted RBP8.56□□□□□ -1.04
DDX39B-207ENST00000427214 CHMP4AQ9BY43 222 aa8.56□□□□□ -1.04
DDX39B-207ENST00000427214 SEC31BQ9NQW1 1179 aa8.56□□□□□ -1.04
DDX39B-207ENST00000427214 CWC25Q9NXE8 425 aaPredicted RBP8.56□□□□□ -1.04
DDX39B-207ENST00000427214 GJA3Q9Y6H8 435 aa8.56□□□□□ -1.04
DDX39B-207ENST00000427214 ZNF521Q96K83 1311 aa8.55□□□□□ -1.04
DDX39B-207ENST00000427214 IQCA1LA6NCM1 817 aa8.55□□□□□ -1.04
DDX39B-207ENST00000427214 EIF6P56537 245 aaKnown RBP8.55□□□□□ -1.04
DDX39B-207ENST00000427214 KCNC4Q03721 635 aa8.55□□□□□ -1.04
DDX39B-207ENST00000427214 FLIIQ13045 1269 aa8.55□□□□□ -1.04
DDX39B-207ENST00000427214 SAMD7Q7Z3H4 446 aa8.55□□□□□ -1.04
DDX39B-207ENST00000427214 NIM1KQ8IY84 436 aa8.55□□□□□ -1.04
DDX39B-207ENST00000427214 TMX4Q9H1E5 349 aaPredicted RBP8.55□□□□□ -1.04
DDX39B-207ENST00000427214 HACL1Q9UJ83 578 aa8.55□□□□□ -1.04
DDX39B-207ENST00000427214 PNMA3Q9UL41 463 aa8.55□□□□□ -1.04
DDX39B-207ENST00000427214 DUOX1Q9NRD9 1551 aa8.55□□□□□ -1.04
DDX39B-207ENST00000427214 NEURL1BA8MQ27 555 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms