RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 AEBP1Q8IUX7 1158 aa8.44□□□□□ -1.06
NIF3L1-207ENST00000426253 ANKLE1Q8NAG6 615 aa8.44□□□□□ -1.06
NIF3L1-207ENST00000426253 PLPP7Q8NBV4 271 aa8.44□□□□□ -1.06
NIF3L1-207ENST00000426253 FOXJ1Q92949 421 aa8.44□□□□□ -1.06
NIF3L1-207ENST00000426253 RNF166Q96A37 237 aaPredicted RBP8.44□□□□□ -1.06
NIF3L1-207ENST00000426253 DCAF5Q96JK2 942 aa8.44□□□□□ -1.06
NIF3L1-207ENST00000426253 PANK3Q9H999 370 aa8.44□□□□□ -1.06
NIF3L1-207ENST00000426253 PIM2Q9P1W9 311 aa8.44□□□□□ -1.06
NIF3L1-207ENST00000426253 NSD2O96028 1365 aa8.44□□□□□ -1.06
NIF3L1-207ENST00000426253 C4BP0C0L5 1744 aa8.43□□□□□ -1.06
NIF3L1-207ENST00000426253 TIAM2Q8IVF5 1701 aa8.43□□□□□ -1.06
NIF3L1-207ENST00000426253 PATL2C9JE40 543 aaKnown RBP8.43□□□□□ -1.06
NIF3L1-207ENST00000426253 ATP5J2-PTCD1G3V325 749 aa8.43□□□□□ -1.06
NIF3L1-207ENST00000426253 BRD1O95696 1058 aa8.43□□□□□ -1.06
NIF3L1-207ENST00000426253 SH3BP2P78314 561 aa8.43□□□□□ -1.06
NIF3L1-207ENST00000426253 GRM1Q13255 1194 aa8.43□□□□□ -1.06
NIF3L1-207ENST00000426253 LINC01559Q495D7 138 aa8.43□□□□□ -1.06
NIF3L1-207ENST00000426253 C4orf48Q5BLP8 95 aa8.43□□□□□ -1.06
NIF3L1-207ENST00000426253 RNF20Q5VTR2 975 aa8.43□□□□□ -1.06
NIF3L1-207ENST00000426253 TRAF7Q6Q0C0 670 aa8.43□□□□□ -1.06
NIF3L1-207ENST00000426253 AMIGO3Q86WK7 504 aa8.43□□□□□ -1.06
NIF3L1-207ENST00000426253 NBPF15Q8N660 670 aa8.43□□□□□ -1.06
NIF3L1-207ENST00000426253 C1QTNF2Q9BXJ5 285 aa8.43□□□□□ -1.06
NIF3L1-207ENST00000426253 CCDC87Q9NVE4 849 aa8.43□□□□□ -1.06
NIF3L1-207ENST00000426253 CDV3Q9UKY7 258 aaKnown RBP8.43□□□□□ -1.06
NIF3L1-207ENST00000426253 NSD3Q9BZ95 1437 aa8.43□□□□□ -1.06
NIF3L1-207ENST00000426253 TOGARAM1Q9Y4F4 1720 aa8.43□□□□□ -1.06
NIF3L1-207ENST00000426253 TAF1LQ8IZX4 1826 aa8.43□□□□□ -1.06
NIF3L1-207ENST00000426253 FAM196BA6NMK8 535 aa8.42□□□□□ -1.06
NIF3L1-207ENST00000426253 RNF223E7ERA6 249 aa8.42□□□□□ -1.06
NIF3L1-207ENST00000426253 PPEF1O14829 653 aaPredicted RBP8.42□□□□□ -1.06
NIF3L1-207ENST00000426253 NCOA4Q13772 614 aa8.42□□□□□ -1.06
NIF3L1-207ENST00000426253 HSP90AB2PQ58FF8 381 aa8.42□□□□□ -1.06
NIF3L1-207ENST00000426253 TRMT44Q8IYL2 757 aaKnown RBP8.42□□□□□ -1.06
NIF3L1-207ENST00000426253 SLC17A8Q8NDX2 589 aa8.42□□□□□ -1.06
NIF3L1-207ENST00000426253 CGNL1Q0VF96 1302 aa8.42□□□□□ -1.06
NIF3L1-207ENST00000426253 UBR3Q6ZT12 1888 aa8.41□□□□□ -1.06
NIF3L1-207ENST00000426253 PASKQ96RG2 1323 aa8.41□□□□□ -1.06
NIF3L1-207ENST00000426253 POTECB2RU33 542 aa8.41□□□□□ -1.06
NIF3L1-207ENST00000426253 PPM1GO15355 546 aaPredicted RBP8.41□□□□□ -1.06
NIF3L1-207ENST00000426253 EML3Q32P44 896 aa8.41□□□□□ -1.06
NIF3L1-207ENST00000426253 NBPF6Q5VWK0 638 aa8.41□□□□□ -1.06
NIF3L1-207ENST00000426253 SPNS2Q8IVW8 549 aa8.41□□□□□ -1.06
NIF3L1-207ENST00000426253 DEPDC4Q8N2C3 294 aa8.41□□□□□ -1.06
NIF3L1-207ENST00000426253 NBPF4Q96M43 638 aa8.41□□□□□ -1.06
NIF3L1-207ENST00000426253 ABT1Q9ULW3 272 aaKnown RBP8.41□□□□□ -1.06
NIF3L1-207ENST00000426253 RASSF10A6NK89 507 aa8.4□□□□□ -1.06
NIF3L1-207ENST00000426253 ESPNB1AK53 854 aa8.4□□□□□ -1.06
NIF3L1-207ENST00000426253 LMNB1P20700 586 aa8.4□□□□□ -1.06
NIF3L1-207ENST00000426253 TNNT2P45379 298 aaPredicted RBP8.4□□□□□ -1.06
NIF3L1-207ENST00000426253 RPIAP49247 311 aa8.4□□□□□ -1.06
NIF3L1-207ENST00000426253 WNT7BP56706 349 aa8.4□□□□□ -1.06
NIF3L1-207ENST00000426253 NBPF20Q3BBV1 942 aa8.4□□□□□ -1.06
NIF3L1-207ENST00000426253 TSGA10IPQ3SY00 556 aa8.4□□□□□ -1.06
NIF3L1-207ENST00000426253 ZCRB1Q8TBF4 217 aaKnown RBP8.4□□□□□ -1.06
NIF3L1-207ENST00000426253 SLC10A4Q96EP9 437 aa8.4□□□□□ -1.06
NIF3L1-207ENST00000426253 EMILIN1Q9Y6C2 1016 aa8.4□□□□□ -1.06
NIF3L1-207ENST00000426253 CASP8AP2Q9UKL3 1982 aa8.39□□□□□ -1.07
NIF3L1-207ENST00000426253 KCNA3P22001 575 aa8.39□□□□□ -1.07
NIF3L1-207ENST00000426253 VARSP26640 1264 aaKnown RBP8.39□□□□□ -1.07
NIF3L1-207ENST00000426253 SSFA2P28290 1259 aa8.39□□□□□ -1.07
NIF3L1-207ENST00000426253 KCNA1Q09470 495 aa8.39□□□□□ -1.07
NIF3L1-207ENST00000426253 TRIM32Q13049 653 aa8.39□□□□□ -1.07
NIF3L1-207ENST00000426253 TRIM50Q86XT4 487 aa8.39□□□□□ -1.07
NIF3L1-207ENST00000426253 USHBP1Q8N6Y0 703 aa8.39□□□□□ -1.07
NIF3L1-207ENST00000426253 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.39□□□□□ -1.07
NIF3L1-207ENST00000426253 POLKQ9UBT6 870 aa8.39□□□□□ -1.07
NIF3L1-207ENST00000426253 KNSTRNQ9Y448 316 aa8.39□□□□□ -1.07
NIF3L1-207ENST00000426253 LTN1O94822 1766 aa8.38□□□□□ -1.07
NIF3L1-207ENST00000426253 INSRP06213 1382 aa8.38□□□□□ -1.07
NIF3L1-207ENST00000426253 PALLDQ8WX93 1383 aa8.38□□□□□ -1.07
NIF3L1-207ENST00000426253 WASHC2AQ641Q2 1341 aa8.38□□□□□ -1.07
NIF3L1-207ENST00000426253 TATP17735 454 aaPredicted RBP8.38□□□□□ -1.07
NIF3L1-207ENST00000426253 RASA1P20936 1047 aa8.38□□□□□ -1.07
NIF3L1-207ENST00000426253 FXR1P51114 621 aaKnown RBP eCLIP8.38□□□□□ -1.07
NIF3L1-207ENST00000426253 PTK7Q13308 1070 aa8.38□□□□□ -1.07
NIF3L1-207ENST00000426253 PPP1R18Q6NYC8 613 aa8.38□□□□□ -1.07
NIF3L1-207ENST00000426253 RAPGEF4Q8WZA2 1011 aa8.38□□□□□ -1.07
NIF3L1-207ENST00000426253 CCDC85AQ96PX6 553 aaPredicted RBP8.38□□□□□ -1.07
NIF3L1-207ENST00000426253 NOVA2Q9UNW9 492 aaKnown RBP8.38□□□□□ -1.07
NIF3L1-207ENST00000426253 DOLKQ9UPQ8 538 aa8.38□□□□□ -1.07
NIF3L1-207ENST00000426253 NOD1Q9Y239 953 aa8.38□□□□□ -1.07
NIF3L1-207ENST00000426253 C4AP0C0L4 1744 aa8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 LTBP1Q14766 1721 aa8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 RTL1A6NKG5 1358 aa8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 FLT4P35916 1363 aa8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 KIF24Q5T7B8 1368 aa8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 CCDC88AQ3V6T2 1871 aa8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 USP17L15C9J2P7 530 aa8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 USP17L10C9JJH3 530 aa8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 USP17L13C9JLJ4 530 aa8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 USP17L12C9JPN9 530 aa8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 USP17L11C9JVI0 530 aa8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 USP17L21D6R901 530 aa8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 USP17L18D6R9N7 530 aa8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 USP17L22D6RA61 530 aa8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 USP17L17D6RBQ6 530 aa8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 USP17L19D6RCP7 530 aa8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 USP17L20D6RJB6 530 aa8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 ATP1A2P50993 1020 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms