RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 CCT4P50991 539 aaKnown RBP16.61■□□□□ 0.25
VRK3-203ENST00000424804 DACT2Q5SW24 774 aa16.61■□□□□ 0.25
VRK3-203ENST00000424804 RGMBQ6NW40 437 aa16.61■□□□□ 0.25
VRK3-203ENST00000424804 USP17L1Q7RTZ2 530 aa16.61■□□□□ 0.25
VRK3-203ENST00000424804 IRS2Q9Y4H2 1338 aa16.61■□□□□ 0.25
VRK3-203ENST00000424804 KLRK1P26718 216 aa16.6■□□□□ 0.25
VRK3-203ENST00000424804 NEXNQ0ZGT2 675 aa16.6■□□□□ 0.25
VRK3-203ENST00000424804 NOGQ13253 232 aa16.6■□□□□ 0.25
VRK3-203ENST00000424804 ANGEL2Q5VTE6 544 aaKnown RBP16.6■□□□□ 0.25
VRK3-203ENST00000424804 WDR63Q8IWG1 891 aa16.6■□□□□ 0.25
VRK3-203ENST00000424804 CDCA5Q96FF9 252 aa16.6■□□□□ 0.25
VRK3-203ENST00000424804 MYOZ2Q9NPC6 264 aa16.6■□□□□ 0.25
VRK3-203ENST00000424804 USP17L8P0C7I0 530 aa16.59■□□□□ 0.25
VRK3-203ENST00000424804 EXOSC9Q06265 439 aaKnown RBP16.59■□□□□ 0.25
VRK3-203ENST00000424804 DNAAF4Q8WXU2 420 aa16.59■□□□□ 0.25
VRK3-203ENST00000424804 BEGAINQ9BUH8 593 aa16.59■□□□□ 0.25
VRK3-203ENST00000424804 G3V3G9 751 aa16.58■□□□□ 0.24
VRK3-203ENST00000424804 CA12O43570 354 aa16.58■□□□□ 0.24
VRK3-203ENST00000424804 ITGA6P23229 1130 aa16.58■□□□□ 0.24
VRK3-203ENST00000424804 FOXO4P98177 505 aa16.58■□□□□ 0.24
VRK3-203ENST00000424804 FAM161AQ3B820 660 aa16.58■□□□□ 0.24
VRK3-203ENST00000424804 DCAF8Q5TAQ9 597 aa16.58■□□□□ 0.24
VRK3-203ENST00000424804 DIEXFQ68CQ4 756 aaKnown RBP16.58■□□□□ 0.24
VRK3-203ENST00000424804 C2orf69Q8N8R5 385 aa16.58■□□□□ 0.24
VRK3-203ENST00000424804 LINS1Q8NG48 757 aa16.58■□□□□ 0.24
VRK3-203ENST00000424804 SCAF8Q9UPN6 1271 aaKnown RBP16.58■□□□□ 0.24
VRK3-203ENST00000424804 LEMD3Q9Y2U8 911 aa16.58■□□□□ 0.24
VRK3-203ENST00000424804 A0A1B0GUL6 1792 aa16.57■□□□□ 0.24
VRK3-203ENST00000424804 PITPNM2Q9BZ72 1349 aa16.57■□□□□ 0.24
VRK3-203ENST00000424804 SNAP23O00161 211 aa16.57■□□□□ 0.24
VRK3-203ENST00000424804 KIF23Q02241 960 aaPredicted RBP16.57■□□□□ 0.24
VRK3-203ENST00000424804 NBPF9Q3BBW0 867 aa16.57■□□□□ 0.24
VRK3-203ENST00000424804 BEND3Q5T5X7 828 aa16.57■□□□□ 0.24
VRK3-203ENST00000424804 SULF1Q8IWU6 871 aa16.57■□□□□ 0.24
VRK3-203ENST00000424804 F6X3S4 739 aa16.56■□□□□ 0.24
VRK3-203ENST00000424804 SLC10A3P09131 477 aa16.56■□□□□ 0.24
VRK3-203ENST00000424804 FKBP5Q13451 457 aaPredicted RBP16.56■□□□□ 0.24
VRK3-203ENST00000424804 STRIP1Q5VSL9 837 aa16.56■□□□□ 0.24
VRK3-203ENST00000424804 ZBED3Q96IU2 234 aaPredicted RBP16.56■□□□□ 0.24
VRK3-203ENST00000424804 CSRNP1Q96S65 589 aa16.56■□□□□ 0.24
VRK3-203ENST00000424804 COA1Q9GZY4 146 aa16.56■□□□□ 0.24
VRK3-203ENST00000424804 ZNF804BA4D1E1 1349 aa16.55■□□□□ 0.24
VRK3-203ENST00000424804 ZNF157P51786 506 aaPredicted RBP16.55■□□□□ 0.24
VRK3-203ENST00000424804 EPHA10Q5JZY3 1008 aa16.55■□□□□ 0.24
VRK3-203ENST00000424804 MOB2Q70IA6 237 aa16.55■□□□□ 0.24
VRK3-203ENST00000424804 CCDC102AQ96A19 550 aa16.55■□□□□ 0.24
VRK3-203ENST00000424804 AKAP11Q9UKA4 1901 aa16.55■□□□□ 0.24
VRK3-203ENST00000424804 WNT10BO00744 389 aa16.54■□□□□ 0.24
VRK3-203ENST00000424804 IGHMBP2P38935 993 aaKnown RBP16.54■□□□□ 0.24
VRK3-203ENST00000424804 RGS19P49795 217 aa16.54■□□□□ 0.24
VRK3-203ENST00000424804 CHRNDQ07001 517 aa16.54■□□□□ 0.24
VRK3-203ENST00000424804 PRAMEF18Q5VWM3 479 aa16.54■□□□□ 0.24
VRK3-203ENST00000424804 MCOLN1Q9GZU1 580 aa16.54■□□□□ 0.24
VRK3-203ENST00000424804 RNF186Q9NXI6 227 aa16.54■□□□□ 0.24
VRK3-203ENST00000424804 PAPPA2Q9BXP8 1791 aa16.54■□□□□ 0.24
VRK3-203ENST00000424804 C15orf52Q6ZUT6 534 aaKnown RBP16.53■□□□□ 0.24
VRK3-203ENST00000424804 RASAL3Q86YV0 1011 aa16.53■□□□□ 0.24
VRK3-203ENST00000424804 ANKRD2Q9GZV1 360 aa16.53■□□□□ 0.24
VRK3-203ENST00000424804 MYH16Q9H6N6 1097 aa16.53■□□□□ 0.24
VRK3-203ENST00000424804 CCER2I3L3R5 266 aa16.52■□□□□ 0.24
VRK3-203ENST00000424804 TTLL5Q6EMB2 1281 aa16.52■□□□□ 0.24
VRK3-203ENST00000424804 CERS5Q8N5B7 392 aa16.52■□□□□ 0.24
VRK3-203ENST00000424804 CD209Q9NNX6 404 aa16.52■□□□□ 0.24
VRK3-203ENST00000424804 SAGE1Q9NXZ1 904 aa16.52■□□□□ 0.24
VRK3-203ENST00000424804 ZNF521Q96K83 1311 aa16.51■□□□□ 0.23
VRK3-203ENST00000424804 TAF5LO75529 589 aa16.51■□□□□ 0.23
VRK3-203ENST00000424804 FKBP1BP68106 108 aa16.51■□□□□ 0.23
VRK3-203ENST00000424804 HELBQ8NG08 1087 aaPredicted RBP16.51■□□□□ 0.23
VRK3-203ENST00000424804 KAZALD1Q96I82 304 aa16.51■□□□□ 0.23
VRK3-203ENST00000424804 MYO3BQ8WXR4 1341 aa16.5■□□□□ 0.23
VRK3-203ENST00000424804 ANKRD18BA2A2Z9 1011 aa16.5■□□□□ 0.23
VRK3-203ENST00000424804 UBE2Q2LH0YL09 131 aa16.5■□□□□ 0.23
VRK3-203ENST00000424804 TRPA1O75762 1119 aa16.5■□□□□ 0.23
VRK3-203ENST00000424804 GTF2IP78347 998 aa16.5■□□□□ 0.23
VRK3-203ENST00000424804 MIER1Q8N108 512 aa16.5■□□□□ 0.23
VRK3-203ENST00000424804 MPHOSPH8Q99549 860 aa16.5■□□□□ 0.23
VRK3-203ENST00000424804 PCDHAC2Q9Y5I4 1007 aa16.5■□□□□ 0.23
VRK3-203ENST00000424804 CCDC85CA6NKD9 419 aa16.49■□□□□ 0.23
VRK3-203ENST00000424804 SASH1O94885 1247 aa16.49■□□□□ 0.23
VRK3-203ENST00000424804 MMP14P50281 582 aa16.49■□□□□ 0.23
VRK3-203ENST00000424804 LMBR1LQ6UX01 489 aa16.49■□□□□ 0.23
VRK3-203ENST00000424804 KIAA0825Q8IV33 1275 aa16.49■□□□□ 0.23
VRK3-203ENST00000424804 ZNF594Q96JF6 807 aaPredicted RBP16.49■□□□□ 0.23
VRK3-203ENST00000424804 IL1R1P14778 569 aa16.48■□□□□ 0.23
VRK3-203ENST00000424804 DGKZQ13574 1117 aa16.48■□□□□ 0.23
VRK3-203ENST00000424804 FBXW7Q969H0 707 aa16.48■□□□□ 0.23
VRK3-203ENST00000424804 AOX1Q06278 1338 aa16.47■□□□□ 0.23
VRK3-203ENST00000424804 GRM8O00222 908 aa16.47■□□□□ 0.23
VRK3-203ENST00000424804 IFIT5Q13325 482 aaKnown RBP16.47■□□□□ 0.23
VRK3-203ENST00000424804 OGFOD1Q8N543 542 aa16.47■□□□□ 0.23
VRK3-203ENST00000424804 MTMR14Q8NCE2 650 aa16.47■□□□□ 0.23
VRK3-203ENST00000424804 LDLRAD1Q5T700 205 aa16.46■□□□□ 0.23
VRK3-203ENST00000424804 ECM29Q5VYK3 1845 aa16.46■□□□□ 0.23
VRK3-203ENST00000424804 ALDH1L1O75891 902 aa16.45■□□□□ 0.22
VRK3-203ENST00000424804 TM4SF4P48230 202 aa16.45■□□□□ 0.22
VRK3-203ENST00000424804 PTPN12Q05209 780 aaKnown RBP16.45■□□□□ 0.22
VRK3-203ENST00000424804 SUCLG2Q96I99 432 aa16.45■□□□□ 0.22
VRK3-203ENST00000424804 TNRC18O15417 2968 aaPredicted RBP16.45■□□□□ 0.22
VRK3-203ENST00000424804 UTYO14607 1347 aa16.45■□□□□ 0.22
VRK3-203ENST00000424804 SSC5DA1L4H1 1573 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms