RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 SH2B1Q9NRF2 756 aaPredicted RBP9.74□□□□□ -0.85
CHD7-201ENST00000423902 RAB3GAP1Q15042 981 aa9.74□□□□□ -0.85
CHD7-201ENST00000423902 PAG1Q9NWQ8 432 aa9.74□□□□□ -0.85
CHD7-201ENST00000423902 POLR1AO95602 1720 aaPredicted RBP9.73□□□□□ -0.85
CHD7-201ENST00000423902 WDR33Q9C0J8 1336 aaKnown RBP9.73□□□□□ -0.85
CHD7-201ENST00000423902 CA8P35219 290 aa9.73□□□□□ -0.85
CHD7-201ENST00000423902 HMGN5P82970 282 aaKnown RBP9.73□□□□□ -0.85
CHD7-201ENST00000423902 ARMC9Q7Z3E5 817 aa9.73□□□□□ -0.85
CHD7-201ENST00000423902 SMARCE1Q969G3 411 aa9.73□□□□□ -0.85
CHD7-201ENST00000423902 NOD1Q9Y239 953 aa9.73□□□□□ -0.85
CHD7-201ENST00000423902 MAP3K15Q6ZN16 1313 aa9.73□□□□□ -0.85
CHD7-201ENST00000423902 TTLL6Q8N841 843 aa9.73□□□□□ -0.85
CHD7-201ENST00000423902 RTL9Q8NET4 1388 aa9.73□□□□□ -0.85
CHD7-201ENST00000423902 A1BGP04217 495 aa9.73□□□□□ -0.85
CHD7-201ENST00000423902 SLC4A8Q2Y0W8 1093 aa9.73□□□□□ -0.85
CHD7-201ENST00000423902 PYM1Q9BRP8 204 aaKnown RBP9.73□□□□□ -0.85
CHD7-201ENST00000423902 MAP3K9P80192 1104 aa9.73□□□□□ -0.85
CHD7-201ENST00000423902 CCDC173Q0VFZ6 552 aa9.73□□□□□ -0.85
CHD7-201ENST00000423902 SPATA31E1Q6ZUB1 1445 aa9.73□□□□□ -0.85
CHD7-201ENST00000423902 FGFR1OPO95684 399 aaKnown RBP9.73□□□□□ -0.85
CHD7-201ENST00000423902 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.73□□□□□ -0.85
CHD7-201ENST00000423902 GOLGA6L3A6NEY3 463 aa9.73□□□□□ -0.85
CHD7-201ENST00000423902 GOLGA6L1Q8N7Z2 621 aa9.73□□□□□ -0.85
CHD7-201ENST00000423902 PALLDQ8WX93 1383 aa9.73□□□□□ -0.85
CHD7-201ENST00000423902 SMARCA5O60264 1052 aaPredicted RBP9.72□□□□□ -0.85
CHD7-201ENST00000423902 LRRC27Q9C0I9 530 aa9.72□□□□□ -0.85
CHD7-201ENST00000423902 KIF1AQ12756 1690 aa9.72□□□□□ -0.85
CHD7-201ENST00000423902 GOLGA8AA7E2F4 631 aa9.72□□□□□ -0.85
CHD7-201ENST00000423902 KIF4AO95239 1232 aa9.72□□□□□ -0.85
CHD7-201ENST00000423902 MCMDC2Q4G0Z9 681 aa9.72□□□□□ -0.85
CHD7-201ENST00000423902 PHACTR3Q96KR7 559 aa9.72□□□□□ -0.85
CHD7-201ENST00000423902 KIF20AO95235 890 aa9.72□□□□□ -0.85
CHD7-201ENST00000423902 KRT85P78386 507 aa9.72□□□□□ -0.85
CHD7-201ENST00000423902 ZNF710Q8N1W2 664 aa9.72□□□□□ -0.85
CHD7-201ENST00000423902 CALML4Q96GE6 196 aa9.72□□□□□ -0.85
CHD7-201ENST00000423902 ZNHIT6Q9NWK9 470 aaKnown RBP9.72□□□□□ -0.85
CHD7-201ENST00000423902 CTSWP56202 376 aa9.72□□□□□ -0.85
CHD7-201ENST00000423902 C8orf58Q8NAV2 365 aa9.72□□□□□ -0.85
CHD7-201ENST00000423902 TANGO6Q9C0B7 1094 aa9.72□□□□□ -0.85
CHD7-201ENST00000423902 NCOA3Q9Y6Q9 1424 aa9.72□□□□□ -0.85
CHD7-201ENST00000423902 SMARCC2Q8TAQ2 1214 aa9.72□□□□□ -0.85
CHD7-201ENST00000423902 C8orf76Q96K31 380 aa9.72□□□□□ -0.85
CHD7-201ENST00000423902 CHD4Q14839 1912 aa9.72□□□□□ -0.85
CHD7-201ENST00000423902 MRPL50Q8N5N7 158 aaKnown RBP9.72□□□□□ -0.85
CHD7-201ENST00000423902 LGR6Q9HBX8 967 aa9.72□□□□□ -0.85
CHD7-201ENST00000423902 TCP11L1Q9NUJ3 509 aa9.72□□□□□ -0.85
CHD7-201ENST00000423902 ERBB3P21860 1342 aa9.72□□□□□ -0.85
CHD7-201ENST00000423902 ATP8B2P98198 1209 aa9.72□□□□□ -0.85
CHD7-201ENST00000423902 RHPN1Q8TCX5 695 aa9.72□□□□□ -0.85
CHD7-201ENST00000423902 SERPINB2P05120 415 aa9.71□□□□□ -0.85
CHD7-201ENST00000423902 ZNF496Q96IT1 587 aaPredicted RBP9.71□□□□□ -0.85
CHD7-201ENST00000423902 HELBQ8NG08 1087 aaPredicted RBP9.71□□□□□ -0.85
CHD7-201ENST00000423902 ZBTB38Q8NAP3 1195 aaPredicted RBP9.71□□□□□ -0.85
CHD7-201ENST00000423902 TAOK3Q9H2K8 898 aa9.71□□□□□ -0.85
CHD7-201ENST00000423902 TTC41PQ6P2S7 1318 aa9.71□□□□□ -0.86
CHD7-201ENST00000423902 RRP36Q96EU6 259 aaKnown RBP9.71□□□□□ -0.86
CHD7-201ENST00000423902 ZNF526Q8TF50 670 aaPredicted RBP9.71□□□□□ -0.86
CHD7-201ENST00000423902 TSG101Q99816 390 aa9.71□□□□□ -0.86
CHD7-201ENST00000423902 MYO6Q9UM54 1294 aa9.71□□□□□ -0.86
CHD7-201ENST00000423902 USPL1Q5W0Q7 1092 aa9.71□□□□□ -0.86
CHD7-201ENST00000423902 PNMA2Q9UL42 364 aa9.71□□□□□ -0.86
CHD7-201ENST00000423902 NCAPD2Q15021 1401 aa9.71□□□□□ -0.86
CHD7-201ENST00000423902 CWF19L2Q2TBE0 894 aaKnown RBP9.71□□□□□ -0.86
CHD7-201ENST00000423902 XDHP47989 1333 aa9.7□□□□□ -0.86
CHD7-201ENST00000423902 CETN1Q12798 172 aa9.7□□□□□ -0.86
CHD7-201ENST00000423902 LPIN2Q92539 896 aa9.7□□□□□ -0.86
CHD7-201ENST00000423902 GCKRQ14397 625 aa9.7□□□□□ -0.86
CHD7-201ENST00000423902 LEMD3Q9Y2U8 911 aa9.7□□□□□ -0.86
CHD7-201ENST00000423902 KDM2BQ8NHM5 1336 aa9.7□□□□□ -0.86
CHD7-201ENST00000423902 NBPF7P0C2Y1 421 aaPredicted RBP9.7□□□□□ -0.86
CHD7-201ENST00000423902 METAP2P50579 478 aaKnown RBP eCLIP9.7□□□□□ -0.86
CHD7-201ENST00000423902 CEBPZQ03701 1054 aaKnown RBP9.7□□□□□ -0.86
CHD7-201ENST00000423902 PRPF40BQ6NWY9 871 aaKnown RBP9.7□□□□□ -0.86
CHD7-201ENST00000423902 C6orf50Q9HD87 102 aa9.7□□□□□ -0.86
CHD7-201ENST00000423902 GLT8D2Q9H1C3 349 aa9.7□□□□□ -0.86
CHD7-201ENST00000423902 MMP10P09238 476 aa9.7□□□□□ -0.86
CHD7-201ENST00000423902 AMPD3Q01432 767 aa9.7□□□□□ -0.86
CHD7-201ENST00000423902 MYO3AQ8NEV4 1616 aa9.7□□□□□ -0.86
CHD7-201ENST00000423902 MBD3O95983 291 aa9.7□□□□□ -0.86
CHD7-201ENST00000423902 MFSD14BQ5SR56 506 aa9.7□□□□□ -0.86
CHD7-201ENST00000423902 JAG2Q9Y219 1238 aa9.7□□□□□ -0.86
CHD7-201ENST00000423902 ZBED4O75132 1171 aa9.7□□□□□ -0.86
CHD7-201ENST00000423902 TTF2Q9UNY4 1162 aaKnown RBP9.7□□□□□ -0.86
CHD7-201ENST00000423902 DCCP43146 1447 aa9.69□□□□□ -0.86
CHD7-201ENST00000423902 TNNT3P45378 269 aaPredicted RBP9.69□□□□□ -0.86
CHD7-201ENST00000423902 ERFEQ4G0M1 354 aa9.69□□□□□ -0.86
CHD7-201ENST00000423902 C1orf167Q5SNV9 1468 aa9.69□□□□□ -0.86
CHD7-201ENST00000423902 EN1Q05925 392 aaPredicted RBP9.69□□□□□ -0.86
CHD7-201ENST00000423902 DHX8Q14562 1220 aaKnown RBP9.69□□□□□ -0.86
CHD7-201ENST00000423902 EYA2O00167 538 aa9.69□□□□□ -0.86
CHD7-201ENST00000423902 RTN1Q16799 776 aa9.69□□□□□ -0.86
CHD7-201ENST00000423902 MASTLQ96GX5 879 aa9.69□□□□□ -0.86
CHD7-201ENST00000423902 DLC1Q96QB1 1528 aa9.69□□□□□ -0.86
CHD7-201ENST00000423902 IQCA1LA6NCM1 817 aa9.69□□□□□ -0.86
CHD7-201ENST00000423902 BMS1Q14692 1282 aaKnown RBP9.69□□□□□ -0.86
CHD7-201ENST00000423902 VSIG10Q8N0Z9 540 aa9.69□□□□□ -0.86
CHD7-201ENST00000423902 PHLPP1O60346 1717 aa9.69□□□□□ -0.86
CHD7-201ENST00000423902 ERVV-1B6SEH8 477 aa9.69□□□□□ -0.86
CHD7-201ENST00000423902 CALML3P27482 149 aa9.69□□□□□ -0.86
CHD7-201ENST00000423902 CLEC4GQ6UXB4 293 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms