RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 ZKSCAN2Q63HK3 967 aa13.72□□□□□ -0.21
USP49-204ENST00000423567 ATF7IPQ6VMQ6 1270 aa13.72□□□□□ -0.21
USP49-204ENST00000423567 PSMD14O00487 310 aa13.71□□□□□ -0.21
USP49-204ENST00000423567 RABL6Q3YEC7 729 aaPredicted RBP13.71□□□□□ -0.21
USP49-204ENST00000423567 PODNQ7Z5L7 613 aa13.71□□□□□ -0.21
USP49-204ENST00000423567 KAZALD1Q96I82 304 aa13.71□□□□□ -0.21
USP49-204ENST00000423567 ZNF594Q96JF6 807 aaPredicted RBP13.71□□□□□ -0.21
USP49-204ENST00000423567 GPRC5DQ9NZD1 345 aa13.71□□□□□ -0.21
USP49-204ENST00000423567 SCN4AP35499 1836 aa13.71□□□□□ -0.22
USP49-204ENST00000423567 LTBP1Q14766 1721 aa13.7□□□□□ -0.22
USP49-204ENST00000423567 H7C1D1 291 aa13.7□□□□□ -0.22
USP49-204ENST00000423567 TRIM27P14373 513 aa13.7□□□□□ -0.22
USP49-204ENST00000423567 RPS12P25398 132 aaKnown RBP13.7□□□□□ -0.22
USP49-204ENST00000423567 EPS15P42566 896 aa13.7□□□□□ -0.22
USP49-204ENST00000423567 INTS3Q68E01 1043 aaKnown RBP13.7□□□□□ -0.22
USP49-204ENST00000423567 USP50Q70EL3 339 aaPredicted RBP13.7□□□□□ -0.22
USP49-204ENST00000423567 ANKRD44Q8N8A2 993 aa13.7□□□□□ -0.22
USP49-204ENST00000423567 ADARB2Q9NS39 739 aaKnown RBP13.7□□□□□ -0.22
USP49-204ENST00000423567 PLIN1O60240 522 aa13.69□□□□□ -0.22
USP49-204ENST00000423567 TAF5LO75529 589 aa13.69□□□□□ -0.22
USP49-204ENST00000423567 GNAI3P08754 354 aa13.69□□□□□ -0.22
USP49-204ENST00000423567 POTEIP0CG38 1075 aa13.69□□□□□ -0.22
USP49-204ENST00000423567 POTEJP0CG39 1038 aa13.69□□□□□ -0.22
USP49-204ENST00000423567 FTSJ3Q8IY81 847 aaKnown RBP13.69□□□□□ -0.22
USP49-204ENST00000423567 HELBQ8NG08 1087 aaPredicted RBP13.69□□□□□ -0.22
USP49-204ENST00000423567 DPF2Q92785 391 aa13.69□□□□□ -0.22
USP49-204ENST00000423567 CLUAP1Q96AJ1 413 aa13.69□□□□□ -0.22
USP49-204ENST00000423567 COA1Q9GZY4 146 aa13.69□□□□□ -0.22
USP49-204ENST00000423567 MROH5Q6ZUA9 1318 aa13.68□□□□□ -0.22
USP49-204ENST00000423567 FBXW7Q969H0 707 aa13.68□□□□□ -0.22
USP49-204ENST00000423567 KCNQ5Q9NR82 932 aa13.68□□□□□ -0.22
USP49-204ENST00000423567 CNOT7Q9UIV1 285 aaKnown RBP13.68□□□□□ -0.22
USP49-204ENST00000423567 USP17L3A6NCW0 530 aa13.67□□□□□ -0.22
USP49-204ENST00000423567 USP17L4A6NCW7 530 aa13.67□□□□□ -0.22
USP49-204ENST00000423567 VIL1P09327 827 aaKnown RBP13.67□□□□□ -0.22
USP49-204ENST00000423567 USP17L1Q7RTZ2 530 aa13.67□□□□□ -0.22
USP49-204ENST00000423567 ZNF804AQ7Z570 1209 aa13.67□□□□□ -0.22
USP49-204ENST00000423567 MICALL2Q8IY33 904 aa13.67□□□□□ -0.22
USP49-204ENST00000423567 AGBL3Q8NEM8 1001 aa13.67□□□□□ -0.22
USP49-204ENST00000423567 MEIS3Q99687 375 aa13.67□□□□□ -0.22
USP49-204ENST00000423567 LRRFIP2Q9Y608 721 aaKnown RBP13.67□□□□□ -0.22
USP49-204ENST00000423567 SPEF2Q9C093 1822 aa13.67□□□□□ -0.22
USP49-204ENST00000423567 WTIPA6NIX2 430 aaPredicted RBP13.66□□□□□ -0.22
USP49-204ENST00000423567 UBE4AQ14139 1066 aa13.66□□□□□ -0.22
USP49-204ENST00000423567 METTL24Q5JXM2 366 aa13.66□□□□□ -0.22
USP49-204ENST00000423567 RSBN1LQ6PCB5 846 aaPredicted RBP13.66□□□□□ -0.22
USP49-204ENST00000423567 PUS3Q9BZE2 481 aaKnown RBP13.66□□□□□ -0.22
USP49-204ENST00000423567 MS4A1P11836 297 aa13.65□□□□□ -0.22
USP49-204ENST00000423567 KLRK1P26718 216 aa13.65□□□□□ -0.22
USP49-204ENST00000423567 MAP1SQ66K74 1059 aaPredicted RBP13.65□□□□□ -0.22
USP49-204ENST00000423567 C15orf52Q6ZUT6 534 aaKnown RBP13.65□□□□□ -0.22
USP49-204ENST00000423567 TXNRD3Q86VQ6 643 aa13.65□□□□□ -0.22
USP49-204ENST00000423567 DZIP1LQ8IYY4 767 aaKnown RBP13.65□□□□□ -0.22
USP49-204ENST00000423567 CNTROBQ8N137 903 aa13.65□□□□□ -0.22
USP49-204ENST00000423567 RIPOR2Q9Y4F9 1068 aa13.65□□□□□ -0.22
USP49-204ENST00000423567 MYO3BQ8WXR4 1341 aa13.64□□□□□ -0.23
USP49-204ENST00000423567 EYA2O00167 538 aa13.64□□□□□ -0.23
USP49-204ENST00000423567 GNAI2P04899 355 aa13.64□□□□□ -0.23
USP49-204ENST00000423567 LRRC24Q50LG9 513 aa13.64□□□□□ -0.23
USP49-204ENST00000423567 STRIP1Q5VSL9 837 aa13.64□□□□□ -0.23
USP49-204ENST00000423567 TMEM57Q8N5G2 664 aa13.64□□□□□ -0.23
USP49-204ENST00000423567 KLHDC4Q8TBB5 520 aa13.64□□□□□ -0.23
USP49-204ENST00000423567 ZC3H15Q8WU90 426 aaKnown RBP13.64□□□□□ -0.23
USP49-204ENST00000423567 CD209Q9NNX6 404 aa13.64□□□□□ -0.23
USP49-204ENST00000423567 FBXO3Q9UK99 471 aa13.64□□□□□ -0.23
USP49-204ENST00000423567 TNNQ9UQP3 1299 aa13.64□□□□□ -0.23
USP49-204ENST00000423567 SNAP23O00161 211 aa13.63□□□□□ -0.23
USP49-204ENST00000423567 USP17L8P0C7I0 530 aa13.63□□□□□ -0.23
USP49-204ENST00000423567 RBM26Q5T8P6 1007 aaKnown RBP13.63□□□□□ -0.23
USP49-204ENST00000423567 TTLL5Q6EMB2 1281 aa13.63□□□□□ -0.23
USP49-204ENST00000423567 SAMD7Q7Z3H4 446 aa13.63□□□□□ -0.23
USP49-204ENST00000423567 VPS37DQ86XT2 251 aa13.63□□□□□ -0.23
USP49-204ENST00000423567 ITPRIPQ8IWB1 547 aa13.63□□□□□ -0.23
USP49-204ENST00000423567 OGFOD1Q8N543 542 aa13.63□□□□□ -0.23
USP49-204ENST00000423567 SHTN1A0MZ66 631 aa13.62□□□□□ -0.23
USP49-204ENST00000423567 PDE8BO95263 885 aa13.62□□□□□ -0.23
USP49-204ENST00000423567 ITGBL1O95965 494 aaPredicted RBP13.62□□□□□ -0.23
USP49-204ENST00000423567 HIBADHP31937 336 aaKnown RBP13.62□□□□□ -0.23
USP49-204ENST00000423567 RFX5P48382 616 aaPredicted RBP13.62□□□□□ -0.23
USP49-204ENST00000423567 GTF2IP78347 998 aa13.62□□□□□ -0.23
USP49-204ENST00000423567 PTPN12Q05209 780 aaKnown RBP13.62□□□□□ -0.23
USP49-204ENST00000423567 KIF4BQ2VIQ3 1234 aa13.62□□□□□ -0.23
USP49-204ENST00000423567 TBC1D10BQ4KMP7 808 aaPredicted RBP13.62□□□□□ -0.23
USP49-204ENST00000423567 CAVIN4Q5BKX8 364 aa13.62□□□□□ -0.23
USP49-204ENST00000423567 DACT2Q5SW24 774 aa13.62□□□□□ -0.23
USP49-204ENST00000423567 TRPM4Q8TD43 1214 aa13.62□□□□□ -0.23
USP49-204ENST00000423567 SIL1Q9H173 461 aa13.62□□□□□ -0.23
USP49-204ENST00000423567 ZNF609O15014 1411 aa13.62□□□□□ -0.23
USP49-204ENST00000423567 PASKQ96RG2 1323 aa13.62□□□□□ -0.23
USP49-204ENST00000423567 SRGAP3O43295 1099 aa13.61□□□□□ -0.23
USP49-204ENST00000423567 CIAO1O76071 339 aa13.61□□□□□ -0.23
USP49-204ENST00000423567 IFIT1P09914 478 aaKnown RBP13.61□□□□□ -0.23
USP49-204ENST00000423567 IL1R1P14778 569 aa13.61□□□□□ -0.23
USP49-204ENST00000423567 MMP14P50281 582 aa13.61□□□□□ -0.23
USP49-204ENST00000423567 PUM3Q15397 648 aaKnown RBP13.61□□□□□ -0.23
USP49-204ENST00000423567 RCAN3Q9UKA8 241 aa13.61□□□□□ -0.23
USP49-204ENST00000423567 HDAC9Q9UKV0 1011 aa13.61□□□□□ -0.23
USP49-204ENST00000423567 IRS2Q9Y4H2 1338 aa13.61□□□□□ -0.23
USP49-204ENST00000423567 TMEM88BA6NKF7 163 aa13.6□□□□□ -0.23
USP49-204ENST00000423567 FRAT2O75474 233 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms