RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 USP17L11C9JVI0 530 aa8.98□□□□□ -0.97
LINC00458-201ENST00000423442 USP17L21D6R901 530 aa8.98□□□□□ -0.97
LINC00458-201ENST00000423442 USP17L18D6R9N7 530 aa8.98□□□□□ -0.97
LINC00458-201ENST00000423442 USP17L22D6RA61 530 aa8.98□□□□□ -0.97
LINC00458-201ENST00000423442 USP17L17D6RBQ6 530 aa8.98□□□□□ -0.97
LINC00458-201ENST00000423442 USP17L19D6RCP7 530 aa8.98□□□□□ -0.97
LINC00458-201ENST00000423442 USP17L20D6RJB6 530 aa8.98□□□□□ -0.97
LINC00458-201ENST00000423442 SASH3O75995 380 aa8.98□□□□□ -0.97
LINC00458-201ENST00000423442 USP17L24Q0WX57 530 aa8.98□□□□□ -0.97
LINC00458-201ENST00000423442 FBXO11Q86XK2 927 aa8.98□□□□□ -0.97
LINC00458-201ENST00000423442 ANKMY2Q8IV38 441 aa8.98□□□□□ -0.97
LINC00458-201ENST00000423442 TRPM4Q8TD43 1214 aa8.98□□□□□ -0.97
LINC00458-201ENST00000423442 WFDC12Q8WWY7 111 aa8.98□□□□□ -0.97
LINC00458-201ENST00000423442 QTRT2Q9H974 415 aaKnown RBP8.98□□□□□ -0.97
LINC00458-201ENST00000423442 CDK11AQ9UQ88 783 aaPredicted RBP8.98□□□□□ -0.97
LINC00458-201ENST00000423442 UBAP1LF5GYI3 381 aa8.97□□□□□ -0.97
LINC00458-201ENST00000423442 IREB2P48200 963 aaKnown RBP8.97□□□□□ -0.97
LINC00458-201ENST00000423442 LRP8Q14114 963 aa8.97□□□□□ -0.97
LINC00458-201ENST00000423442 PCSK7Q16549 785 aa8.97□□□□□ -0.97
LINC00458-201ENST00000423442 ELMSAN1Q6PJG2 1045 aa8.97□□□□□ -0.97
LINC00458-201ENST00000423442 HFE2Q6ZVN8 426 aa8.97□□□□□ -0.97
LINC00458-201ENST00000423442 FRRS1LQ9P0K9 344 aa8.97□□□□□ -0.97
LINC00458-201ENST00000423442 USP20Q9Y2K6 914 aa8.97□□□□□ -0.97
LINC00458-201ENST00000423442 HYAL3O43820 417 aaPredicted RBP8.96□□□□□ -0.98
LINC00458-201ENST00000423442 MICAL2O94851 1124 aa8.96□□□□□ -0.98
LINC00458-201ENST00000423442 RARAP10276 462 aa8.96□□□□□ -0.98
LINC00458-201ENST00000423442 NOS3P29474 1203 aa8.96□□□□□ -0.98
LINC00458-201ENST00000423442 ARSDP51689 593 aa8.96□□□□□ -0.98
LINC00458-201ENST00000423442 WFDC8Q8IUA0 241 aa8.96□□□□□ -0.98
LINC00458-201ENST00000423442 DTWD1Q8N5C7 304 aa8.96□□□□□ -0.98
LINC00458-201ENST00000423442 CALR3Q96L12 384 aaKnown RBP8.96□□□□□ -0.98
LINC00458-201ENST00000423442 NCOA1Q15788 1441 aa8.96□□□□□ -0.98
LINC00458-201ENST00000423442 CDK13Q14004 1512 aaKnown RBP8.95□□□□□ -0.98
LINC00458-201ENST00000423442 FAM196BA6NMK8 535 aa8.95□□□□□ -0.98
LINC00458-201ENST00000423442 EFCAB2Q5VUJ9 269 aa8.95□□□□□ -0.98
LINC00458-201ENST00000423442 AFAP1Q8N556 730 aa8.95□□□□□ -0.98
LINC00458-201ENST00000423442 ARXQ96QS3 562 aa8.95□□□□□ -0.98
LINC00458-201ENST00000423442 MYO5CQ9NQX4 1742 aa8.94□□□□□ -0.98
LINC00458-201ENST00000423442 DEAF1O75398 565 aaPredicted RBP8.94□□□□□ -0.98
LINC00458-201ENST00000423442 LMOD1P29536 600 aaPredicted RBP8.94□□□□□ -0.98
LINC00458-201ENST00000423442 WEE1P30291 646 aa8.94□□□□□ -0.98
LINC00458-201ENST00000423442 GPLD1P80108 840 aa8.94□□□□□ -0.98
LINC00458-201ENST00000423442 SMG9Q9H0W8 520 aaKnown RBP8.94□□□□□ -0.98
LINC00458-201ENST00000423442 VRTNQ9H8Y1 702 aa8.94□□□□□ -0.98
LINC00458-201ENST00000423442 ZNF335Q9H4Z2 1342 aaPredicted RBP8.94□□□□□ -0.98
LINC00458-201ENST00000423442 TRAPPC8Q9Y2L5 1435 aa8.94□□□□□ -0.98
LINC00458-201ENST00000423442 DIP2CQ9Y2E4 1556 aa8.94□□□□□ -0.98
LINC00458-201ENST00000423442 OPLAHO14841 1288 aa8.93□□□□□ -0.98
LINC00458-201ENST00000423442 C11orf91Q3C1V1 193 aa8.93□□□□□ -0.98
LINC00458-201ENST00000423442 MEGF10Q96KG7 1140 aa8.93□□□□□ -0.98
LINC00458-201ENST00000423442 ZNF518AQ6AHZ1 1483 aa8.93□□□□□ -0.98
LINC00458-201ENST00000423442 CAMSAP1Q5T5Y3 1602 aa8.93□□□□□ -0.98
LINC00458-201ENST00000423442 KDM5CP41229 1560 aa8.92□□□□□ -0.98
LINC00458-201ENST00000423442 FMN1Q68DA7 1419 aa8.92□□□□□ -0.98
LINC00458-201ENST00000423442 IGF2-ASQ6U949 168 aa8.92□□□□□ -0.98
LINC00458-201ENST00000423442 TTC9Q92623 222 aa8.92□□□□□ -0.98
LINC00458-201ENST00000423442 LRFN2Q9ULH4 789 aa8.92□□□□□ -0.98
LINC00458-201ENST00000423442 RTCBQ9Y3I0 505 aaKnown RBP8.92□□□□□ -0.98
LINC00458-201ENST00000423442 ABCA6Q8N139 1617 aa8.91□□□□□ -0.98
LINC00458-201ENST00000423442 REREQ9P2R6 1566 aa8.91□□□□□ -0.98
LINC00458-201ENST00000423442 FOXO3O43524 673 aa8.91□□□□□ -0.98
LINC00458-201ENST00000423442 EIF2AK2P19525 551 aaKnown RBP8.91□□□□□ -0.98
LINC00458-201ENST00000423442 VTI1AQ96AJ9 217 aa8.91□□□□□ -0.98
LINC00458-201ENST00000423442 MYO19Q96H55 970 aa8.91□□□□□ -0.98
LINC00458-201ENST00000423442 C11orf16Q9NQ32 467 aa8.91□□□□□ -0.98
LINC00458-201ENST00000423442 MED1Q15648 1581 aaPredicted RBP8.9□□□□□ -0.98
LINC00458-201ENST00000423442 J3QW42 95 aa8.9□□□□□ -0.98
LINC00458-201ENST00000423442 HSPA1LP34931 641 aa8.9□□□□□ -0.98
LINC00458-201ENST00000423442 RGL4Q8IZJ4 473 aa8.9□□□□□ -0.98
LINC00458-201ENST00000423442 TLR7Q9NYK1 1049 aaKnown RBP8.9□□□□□ -0.98
LINC00458-201ENST00000423442 KIF14Q15058 1648 aa8.9□□□□□ -0.99
LINC00458-201ENST00000423442 ARHGAP5Q13017 1502 aa8.9□□□□□ -0.99
LINC00458-201ENST00000423442 DLL1O00548 723 aa8.89□□□□□ -0.99
LINC00458-201ENST00000423442 XYLBO75191 536 aa8.89□□□□□ -0.99
LINC00458-201ENST00000423442 ALX3O95076 343 aa8.89□□□□□ -0.99
LINC00458-201ENST00000423442 NRLP54845 237 aa8.89□□□□□ -0.99
LINC00458-201ENST00000423442 CMTR1Q8N1G2 835 aaKnown RBP8.89□□□□□ -0.99
LINC00458-201ENST00000423442 AGLP35573 1532 aa8.89□□□□□ -0.99
LINC00458-201ENST00000423442 MLH3Q9UHC1 1453 aa8.89□□□□□ -0.99
LINC00458-201ENST00000423442 PIP4K2BP78356 416 aa8.88□□□□□ -0.99
LINC00458-201ENST00000423442 TREML1Q86YW5 311 aa8.88□□□□□ -0.99
LINC00458-201ENST00000423442 PLD4Q96BZ4 506 aa8.88□□□□□ -0.99
LINC00458-201ENST00000423442 CNTLNQ9NXG0 1405 aa8.88□□□□□ -0.99
LINC00458-201ENST00000423442 LOC102724428A0A0B4J2F2 783 aa8.87□□□□□ -0.99
LINC00458-201ENST00000423442 MMP20O60882 483 aa8.87□□□□□ -0.99
LINC00458-201ENST00000423442 EGFRP00533 1210 aa8.87□□□□□ -0.99
LINC00458-201ENST00000423442 ARID4AP29374 1257 aaPredicted RBP8.87□□□□□ -0.99
LINC00458-201ENST00000423442 SIK1P57059 783 aa8.87□□□□□ -0.99
LINC00458-201ENST00000423442 CDCA8Q53HL2 280 aa8.87□□□□□ -0.99
LINC00458-201ENST00000423442 GDF6Q6KF10 455 aaPredicted RBP8.87□□□□□ -0.99
LINC00458-201ENST00000423442 PRR23CQ6ZRP0 262 aa8.87□□□□□ -0.99
LINC00458-201ENST00000423442 NSUN5Q96P11 429 aaKnown RBP8.87□□□□□ -0.99
LINC00458-201ENST00000423442 SUPT6HQ7KZ85 1726 aaKnown RBP8.86□□□□□ -0.99
LINC00458-201ENST00000423442 CDC42BPBQ9Y5S2 1711 aa8.86□□□□□ -0.99
LINC00458-201ENST00000423442 FAM200AQ8TCP9 573 aa8.86□□□□□ -0.99
LINC00458-201ENST00000423442 AKTIPQ9H8T0 292 aa8.86□□□□□ -0.99
LINC00458-201ENST00000423442 RNF112Q9ULX5 631 aa8.86□□□□□ -0.99
LINC00458-201ENST00000423442 KCNMB2Q9Y691 235 aa8.86□□□□□ -0.99
LINC00458-201ENST00000423442 NPATQ14207 1427 aa8.86□□□□□ -0.99
LINC00458-201ENST00000423442 ZMYM3Q14202 1370 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms