RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 COL5A2P05997 1499 aaPredicted RBP11.43□□□□□ -0.58
CMSS1-201ENST00000421999 ANKRD20A12PQ8NF67 263 aa11.43□□□□□ -0.58
CMSS1-201ENST00000421999 COPRSQ9NQ92 184 aa11.43□□□□□ -0.58
CMSS1-201ENST00000421999 ZFYP08048 801 aaPredicted RBP11.43□□□□□ -0.58
CMSS1-201ENST00000421999 MCMDC2Q4G0Z9 681 aa11.43□□□□□ -0.58
CMSS1-201ENST00000421999 NLGN1Q8N2Q7 840 aa11.43□□□□□ -0.58
CMSS1-201ENST00000421999 ZHX3Q9H4I2 956 aa11.43□□□□□ -0.58
CMSS1-201ENST00000421999 SEC31BQ9NQW1 1179 aa11.43□□□□□ -0.58
CMSS1-201ENST00000421999 ERFEQ4G0M1 354 aa11.42□□□□□ -0.58
CMSS1-201ENST00000421999 MIGA1Q8NAN2 632 aa11.42□□□□□ -0.58
CMSS1-201ENST00000421999 CNKSR2Q8WXI2 1034 aa11.42□□□□□ -0.58
CMSS1-201ENST00000421999 TCEANC2Q96MN5 208 aa11.42□□□□□ -0.58
CMSS1-201ENST00000421999 VAT1LQ9HCJ6 419 aa11.42□□□□□ -0.58
CMSS1-201ENST00000421999 GGA1Q9UJY5 639 aa11.42□□□□□ -0.58
CMSS1-201ENST00000421999 PXDNQ92626 1479 aa11.42□□□□□ -0.58
CMSS1-201ENST00000421999 ADCY9O60503 1353 aa11.42□□□□□ -0.58
CMSS1-201ENST00000421999 RBM8AQ9Y5S9 174 aaKnown RBP11.42□□□□□ -0.58
CMSS1-201ENST00000421999 KNDC1Q76NI1 1749 aa11.42□□□□□ -0.58
CMSS1-201ENST00000421999 IBTKQ9P2D0 1353 aaPredicted RBP11.42□□□□□ -0.58
CMSS1-201ENST00000421999 SSBP05455 408 aaKnown RBP eCLIP11.42□□□□□ -0.58
CMSS1-201ENST00000421999 NF2P35240 595 aa11.42□□□□□ -0.58
CMSS1-201ENST00000421999 MFSD6Q6ZSS7 791 aa11.42□□□□□ -0.58
CMSS1-201ENST00000421999 LPIN2Q92539 896 aa11.42□□□□□ -0.58
CMSS1-201ENST00000421999 TBC1D2Q9BYX2 928 aa11.42□□□□□ -0.58
CMSS1-201ENST00000421999 SLC12A7Q9Y666 1083 aa11.42□□□□□ -0.58
CMSS1-201ENST00000421999 SLC4A4Q9Y6R1 1079 aa11.42□□□□□ -0.58
CMSS1-201ENST00000421999 LDHBP07195 334 aaKnown RBP11.41□□□□□ -0.58
CMSS1-201ENST00000421999 SKOR2Q2VWA4 1001 aaPredicted RBP11.41□□□□□ -0.58
CMSS1-201ENST00000421999 CCDC196A0A1B0GTZ2 297 aa11.41□□□□□ -0.58
CMSS1-201ENST00000421999 H7C1W4 665 aa11.41□□□□□ -0.58
CMSS1-201ENST00000421999 TXNRD1Q16881 649 aa11.41□□□□□ -0.58
CMSS1-201ENST00000421999 SASS6Q6UVJ0 657 aa11.41□□□□□ -0.58
CMSS1-201ENST00000421999 MAGEB6Q8N7X4 407 aa11.41□□□□□ -0.58
CMSS1-201ENST00000421999 ATF5Q9Y2D1 282 aaPredicted RBP11.41□□□□□ -0.58
CMSS1-201ENST00000421999 RNF113AO15541 343 aaKnown RBP11.41□□□□□ -0.58
CMSS1-201ENST00000421999 SERPINB2P05120 415 aa11.41□□□□□ -0.58
CMSS1-201ENST00000421999 HIBADHP31937 336 aaKnown RBP11.41□□□□□ -0.58
CMSS1-201ENST00000421999 JMYQ8N9B5 988 aa11.41□□□□□ -0.58
CMSS1-201ENST00000421999 ZSCAN31Q96LW9 406 aaPredicted RBP11.41□□□□□ -0.58
CMSS1-201ENST00000421999 NOL7Q9UMY1 257 aaKnown RBP11.41□□□□□ -0.58
CMSS1-201ENST00000421999 FMN2Q9NZ56 1722 aa11.4□□□□□ -0.58
CMSS1-201ENST00000421999 TPM1P09493 284 aa11.4□□□□□ -0.58
CMSS1-201ENST00000421999 GSPT1P15170 499 aaKnown RBP11.4□□□□□ -0.58
CMSS1-201ENST00000421999 ME1P48163 572 aa11.4□□□□□ -0.58
CMSS1-201ENST00000421999 PTPN12Q05209 780 aaKnown RBP11.4□□□□□ -0.58
CMSS1-201ENST00000421999 FERMT3Q86UX7 667 aa11.4□□□□□ -0.58
CMSS1-201ENST00000421999 RAB11FIP4Q86YS3 637 aa11.4□□□□□ -0.58
CMSS1-201ENST00000421999 CCDC83Q8IWF9 413 aa11.4□□□□□ -0.58
CMSS1-201ENST00000421999 ZNF396Q96N95 335 aaPredicted RBP11.4□□□□□ -0.58
CMSS1-201ENST00000421999 ZNF408Q9H9D4 720 aa11.4□□□□□ -0.58
CMSS1-201ENST00000421999 MROH5Q6ZUA9 1318 aa11.4□□□□□ -0.58
CMSS1-201ENST00000421999 KINO60870 393 aaKnown RBP11.4□□□□□ -0.58
CMSS1-201ENST00000421999 PPFIA3O75145 1194 aa11.4□□□□□ -0.58
CMSS1-201ENST00000421999 ECM2O94769 699 aaPredicted RBP11.4□□□□□ -0.58
CMSS1-201ENST00000421999 IBSPP21815 317 aaPredicted RBP11.4□□□□□ -0.58
CMSS1-201ENST00000421999 ITPK1Q13572 414 aa11.4□□□□□ -0.58
CMSS1-201ENST00000421999 MICU3Q86XE3 530 aa11.4□□□□□ -0.58
CMSS1-201ENST00000421999 ARHGEF1Q92888 912 aaKnown RBP11.4□□□□□ -0.58
CMSS1-201ENST00000421999 FAM227BQ96M60 508 aa11.4□□□□□ -0.58
CMSS1-201ENST00000421999 XRN1Q8IZH2 1706 aaKnown RBP11.4□□□□□ -0.58
CMSS1-201ENST00000421999 CCDC129Q6ZRS4 1044 aa11.4□□□□□ -0.58
CMSS1-201ENST00000421999 CATIPQ7Z7H3 387 aa11.4□□□□□ -0.58
CMSS1-201ENST00000421999 CCDC144CPQ8IYA2 1237 aa11.4□□□□□ -0.58
CMSS1-201ENST00000421999 TLR7Q9NYK1 1049 aaKnown RBP11.4□□□□□ -0.58
CMSS1-201ENST00000421999 ZAP70P43403 619 aa11.39□□□□□ -0.59
CMSS1-201ENST00000421999 CCT2P78371 535 aaKnown RBP11.39□□□□□ -0.59
CMSS1-201ENST00000421999 PDIA6Q15084 440 aa11.39□□□□□ -0.59
CMSS1-201ENST00000421999 TMEM67Q5HYA8 995 aa11.39□□□□□ -0.59
CMSS1-201ENST00000421999 TPM3P06753 285 aa11.39□□□□□ -0.59
CMSS1-201ENST00000421999 EIF6P56537 245 aaKnown RBP11.39□□□□□ -0.59
CMSS1-201ENST00000421999 TTLL11Q8NHH1 800 aa11.39□□□□□ -0.59
CMSS1-201ENST00000421999 RTN4Q9NQC3 1192 aaKnown RBP11.39□□□□□ -0.59
CMSS1-201ENST00000421999 MCM9Q9NXL9 1143 aa11.39□□□□□ -0.59
CMSS1-201ENST00000421999 NARFQ9UHQ1 456 aa11.39□□□□□ -0.59
CMSS1-201ENST00000421999 COL15A1P39059 1388 aa11.39□□□□□ -0.59
CMSS1-201ENST00000421999 KIF1AQ12756 1690 aa11.39□□□□□ -0.59
CMSS1-201ENST00000421999 GOLGA8BA8MQT2 603 aa11.39□□□□□ -0.59
CMSS1-201ENST00000421999 ALDH1B1P30837 517 aa11.39□□□□□ -0.59
CMSS1-201ENST00000421999 CLEC4GQ6UXB4 293 aa11.39□□□□□ -0.59
CMSS1-201ENST00000421999 LRRC2Q9BYS8 371 aa11.39□□□□□ -0.59
CMSS1-201ENST00000421999 KDM6AO15550 1401 aaPredicted RBP11.39□□□□□ -0.59
CMSS1-201ENST00000421999 PPIP5K2O43314 1243 aa11.39□□□□□ -0.59
CMSS1-201ENST00000421999 PDE6BP35913 854 aa11.39□□□□□ -0.59
CMSS1-201ENST00000421999 NFKBIBQ15653 356 aa11.39□□□□□ -0.59
CMSS1-201ENST00000421999 WASF1Q92558 559 aa11.39□□□□□ -0.59
CMSS1-201ENST00000421999 NEK1Q96PY6 1258 aa11.39□□□□□ -0.59
CMSS1-201ENST00000421999 CHD2O14647 1828 aaKnown RBP11.38□□□□□ -0.59
CMSS1-201ENST00000421999 GOLGA8AA7E2F4 631 aa11.38□□□□□ -0.59
CMSS1-201ENST00000421999 HMGB1P09429 215 aaKnown RBP11.38□□□□□ -0.59
CMSS1-201ENST00000421999 GYG1P46976 350 aa11.38□□□□□ -0.59
CMSS1-201ENST00000421999 HOMER1Q86YM7 354 aa11.38□□□□□ -0.59
CMSS1-201ENST00000421999 C2CD5Q86YS7 1000 aa11.38□□□□□ -0.59
CMSS1-201ENST00000421999 MPNDQ8N594 471 aa11.38□□□□□ -0.59
CMSS1-201ENST00000421999 KAT14Q9H8E8 782 aa11.38□□□□□ -0.59
CMSS1-201ENST00000421999 DBNLQ9UJU6 430 aaKnown RBP11.38□□□□□ -0.59
CMSS1-201ENST00000421999 RGPD8O14715 1765 aaPredicted RBP11.38□□□□□ -0.59
CMSS1-201ENST00000421999 PDE8BO95263 885 aa11.38□□□□□ -0.59
CMSS1-201ENST00000421999 ATP5JP18859 108 aa11.38□□□□□ -0.59
CMSS1-201ENST00000421999 CHRNDQ07001 517 aa11.38□□□□□ -0.59
CMSS1-201ENST00000421999 MAGEB6P1A0A0J9YX57 407 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms