RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 ZFYVE28Q9HCC9 887 aa15.9■□□□□ 0.14
UFD1-203ENST00000421968 BCAMP50895 628 aa15.89■□□□□ 0.13
UFD1-203ENST00000421968 KIF22Q14807 665 aa15.89■□□□□ 0.13
UFD1-203ENST00000421968 TAF1CQ15572 869 aaPredicted RBP15.89■□□□□ 0.13
UFD1-203ENST00000421968 APOBEC3FQ8IUX4 373 aaKnown RBP15.89■□□□□ 0.13
UFD1-203ENST00000421968 OGFOD1Q8N543 542 aa15.89■□□□□ 0.13
UFD1-203ENST00000421968 PHACTR3Q96KR7 559 aa15.89■□□□□ 0.13
UFD1-203ENST00000421968 GDF15Q99988 308 aa15.89■□□□□ 0.13
UFD1-203ENST00000421968 ARHGAP39Q9C0H5 1083 aa15.89■□□□□ 0.13
UFD1-203ENST00000421968 TRMT112Q9UI30 125 aaKnown RBP15.89■□□□□ 0.13
UFD1-203ENST00000421968 KNSTRNQ9Y448 316 aa15.89■□□□□ 0.13
UFD1-203ENST00000421968 PSME4Q14997 1843 aa15.89■□□□□ 0.13
UFD1-203ENST00000421968 TESPA1A2RU30 521 aaPredicted RBP15.88■□□□□ 0.13
UFD1-203ENST00000421968 USP17L3A6NCW0 530 aa15.88■□□□□ 0.13
UFD1-203ENST00000421968 USP17L4A6NCW7 530 aa15.88■□□□□ 0.13
UFD1-203ENST00000421968 PPP1R12BO60237 982 aaPredicted RBP15.88■□□□□ 0.13
UFD1-203ENST00000421968 UFL1O94874 794 aa15.88■□□□□ 0.13
UFD1-203ENST00000421968 SASH1O94885 1247 aa15.88■□□□□ 0.13
UFD1-203ENST00000421968 GJA5P36382 358 aa15.88■□□□□ 0.13
UFD1-203ENST00000421968 MAP3K11Q16584 847 aa15.88■□□□□ 0.13
UFD1-203ENST00000421968 USP17L1Q7RTZ2 530 aa15.88■□□□□ 0.13
UFD1-203ENST00000421968 MIS18AQ9NYP9 233 aa15.88■□□□□ 0.13
UFD1-203ENST00000421968 SH3TC1Q8TE82 1336 aa15.88■□□□□ 0.13
UFD1-203ENST00000421968 CCL5P13501 91 aa15.87■□□□□ 0.13
UFD1-203ENST00000421968 NLRP10Q86W26 655 aa15.87■□□□□ 0.13
UFD1-203ENST00000421968 RNF208Q9H0X6 261 aa15.87■□□□□ 0.13
UFD1-203ENST00000421968 ZSWIM8A7E2V4 1837 aa15.87■□□□□ 0.13
UFD1-203ENST00000421968 PRMT2P55345 433 aa15.86■□□□□ 0.13
UFD1-203ENST00000421968 DCTN1Q14203 1278 aa15.86■□□□□ 0.13
UFD1-203ENST00000421968 ANKIB1Q9P2G1 1089 aa15.86■□□□□ 0.13
UFD1-203ENST00000421968 UNCXA6NJT0 531 aa15.85■□□□□ 0.13
UFD1-203ENST00000421968 ECM2O94769 699 aaPredicted RBP15.85■□□□□ 0.13
UFD1-203ENST00000421968 GNRH1P01148 92 aa15.85■□□□□ 0.13
UFD1-203ENST00000421968 LACTBP83111 547 aaPredicted RBP15.85■□□□□ 0.13
UFD1-203ENST00000421968 TAF7Q15545 349 aaPredicted RBP15.85■□□□□ 0.13
UFD1-203ENST00000421968 U2AF1L4Q8WU68 220 aaKnown RBP15.85■□□□□ 0.13
UFD1-203ENST00000421968 GGA1Q9UJY5 639 aa15.85■□□□□ 0.13
UFD1-203ENST00000421968 GRK4P32298 578 aa15.84■□□□□ 0.13
UFD1-203ENST00000421968 TDHQ8IZJ6 230 aa15.84■□□□□ 0.13
UFD1-203ENST00000421968 SYMPKQ92797 1274 aaKnown RBP15.84■□□□□ 0.13
UFD1-203ENST00000421968 ZNF428Q96B54 188 aa15.84■□□□□ 0.13
UFD1-203ENST00000421968 GUCD1Q96NT3 240 aa15.84■□□□□ 0.13
UFD1-203ENST00000421968 MXD3Q9BW11 206 aa15.84■□□□□ 0.13
UFD1-203ENST00000421968 DEFB129Q9H1M3 183 aa15.84■□□□□ 0.13
UFD1-203ENST00000421968 PODXL2Q9NZ53 605 aa15.84■□□□□ 0.13
UFD1-203ENST00000421968 BIN2Q9UBW5 565 aaPredicted RBP15.84■□□□□ 0.13
UFD1-203ENST00000421968 IRS2Q9Y4H2 1338 aa15.84■□□□□ 0.13
UFD1-203ENST00000421968 HOXD11P31277 338 aaPredicted RBP15.83■□□□□ 0.12
UFD1-203ENST00000421968 PRKAR2BP31323 418 aa15.83■□□□□ 0.12
UFD1-203ENST00000421968 RPS8P62241 208 aaKnown RBP15.83■□□□□ 0.12
UFD1-203ENST00000421968 HSP90AB3PQ58FF7 597 aa15.83■□□□□ 0.12
UFD1-203ENST00000421968 THUMPD2Q9BTF0 503 aaKnown RBP15.83■□□□□ 0.12
UFD1-203ENST00000421968 WDHD1O75717 1129 aaPredicted RBP15.82■□□□□ 0.12
UFD1-203ENST00000421968 IREB2P48200 963 aaKnown RBP15.82■□□□□ 0.12
UFD1-203ENST00000421968 SF3B3Q15393 1217 aaKnown RBP15.82■□□□□ 0.12
UFD1-203ENST00000421968 PODNQ7Z5L7 613 aa15.82■□□□□ 0.12
UFD1-203ENST00000421968 RAET1EQ8TD07 263 aa15.82■□□□□ 0.12
UFD1-203ENST00000421968 BRI3BPQ8WY22 251 aa15.82■□□□□ 0.12
UFD1-203ENST00000421968 MS4A4AQ96JQ5 239 aa15.82■□□□□ 0.12
UFD1-203ENST00000421968 ZMYND8Q9ULU4 1186 aaPredicted RBP15.82■□□□□ 0.12
UFD1-203ENST00000421968 COL4A1P02462 1669 aa15.82■□□□□ 0.12
UFD1-203ENST00000421968 CCL15-CCL14A0A0B4J2E2 113 aa15.81■□□□□ 0.12
UFD1-203ENST00000421968 SSC5DA1L4H1 1573 aa15.81■□□□□ 0.12
UFD1-203ENST00000421968 COL1A1P02452 1464 aaPredicted RBP15.81■□□□□ 0.12
UFD1-203ENST00000421968 UBXN2AP68543 259 aa15.81■□□□□ 0.12
UFD1-203ENST00000421968 CCL15Q16663 113 aa15.81■□□□□ 0.12
UFD1-203ENST00000421968 ANKRD13AQ8IZ07 590 aa15.81■□□□□ 0.12
UFD1-203ENST00000421968 FAM43AQ8N2R8 423 aa15.81■□□□□ 0.12
UFD1-203ENST00000421968 FBXW7Q969H0 707 aa15.81■□□□□ 0.12
UFD1-203ENST00000421968 OPTNQ96CV9 577 aa15.81■□□□□ 0.12
UFD1-203ENST00000421968 TRIM47Q96LD4 638 aa15.81■□□□□ 0.12
UFD1-203ENST00000421968 FAM161BQ96MY7 647 aa15.81■□□□□ 0.12
UFD1-203ENST00000421968 RIPOR2Q9Y4F9 1068 aa15.81■□□□□ 0.12
UFD1-203ENST00000421968 ALPK3Q96L96 1907 aa15.8■□□□□ 0.12
UFD1-203ENST00000421968 SGPL1O95470 568 aa15.8■□□□□ 0.12
UFD1-203ENST00000421968 SUPT20HL1Q3ZLR7 823 aa15.8■□□□□ 0.12
UFD1-203ENST00000421968 C7orf61Q8IZ16 206 aa15.8■□□□□ 0.12
UFD1-203ENST00000421968 ELP3Q9H9T3 547 aa15.8■□□□□ 0.12
UFD1-203ENST00000421968 SRRDQ9UH36 339 aa15.8■□□□□ 0.12
UFD1-203ENST00000421968 MYO3BQ8WXR4 1341 aa15.79■□□□□ 0.12
UFD1-203ENST00000421968 TLR2O60603 784 aa15.79■□□□□ 0.12
UFD1-203ENST00000421968 AMER1Q5JTC6 1135 aaPredicted RBP15.79■□□□□ 0.12
UFD1-203ENST00000421968 DACT2Q5SW24 774 aa15.79■□□□□ 0.12
UFD1-203ENST00000421968 TMEM265A0A087WTH1 108 aa15.78■□□□□ 0.12
UFD1-203ENST00000421968 USP2O75604 605 aaPredicted RBP15.78■□□□□ 0.12
UFD1-203ENST00000421968 TFRCP02786 760 aaKnown RBP15.78■□□□□ 0.12
UFD1-203ENST00000421968 HOXD10P28358 340 aa15.78■□□□□ 0.12
UFD1-203ENST00000421968 MAGEA10P43363 369 aaPredicted RBP15.78■□□□□ 0.12
UFD1-203ENST00000421968 EIF4A1P60842 406 aaKnown RBP15.78■□□□□ 0.12
UFD1-203ENST00000421968 FAM109BQ6ICB4 259 aaPredicted RBP15.78■□□□□ 0.12
UFD1-203ENST00000421968 UBE2OQ9C0C9 1292 aaKnown RBP15.78■□□□□ 0.12
UFD1-203ENST00000421968 UNC93B1Q9H1C4 597 aa15.78■□□□□ 0.12
UFD1-203ENST00000421968 POTEB2H3BUK9 544 aa15.77■□□□□ 0.12
UFD1-203ENST00000421968 TNFRSF10AO00220 468 aa15.77■□□□□ 0.12
UFD1-203ENST00000421968 SYN1P17600 705 aa15.77■□□□□ 0.12
UFD1-203ENST00000421968 PSMC4P43686 418 aa15.77■□□□□ 0.12
UFD1-203ENST00000421968 MMP14P50281 582 aa15.77■□□□□ 0.12
UFD1-203ENST00000421968 GTF2A2P52657 109 aa15.77■□□□□ 0.12
UFD1-203ENST00000421968 LRP10Q7Z4F1 713 aa15.77■□□□□ 0.12
UFD1-203ENST00000421968 MAFAQ8NHW3 353 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms