RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 BBOX1O75936 387 aa7.54□□□□□ -1.2
HDAC8-212ENST00000421523 ZBTB48P10074 688 aaPredicted RBP7.54□□□□□ -1.2
HDAC8-212ENST00000421523 CCL5P13501 91 aa7.54□□□□□ -1.2
HDAC8-212ENST00000421523 SYN1P17600 705 aa7.54□□□□□ -1.2
HDAC8-212ENST00000421523 BMP8BP34820 402 aa7.54□□□□□ -1.2
HDAC8-212ENST00000421523 NBPF9Q3BBW0 867 aa7.54□□□□□ -1.2
HDAC8-212ENST00000421523 PTPN18Q99952 460 aa7.54□□□□□ -1.2
HDAC8-212ENST00000421523 RNF208Q9H0X6 261 aa7.54□□□□□ -1.2
HDAC8-212ENST00000421523 ZBTB3Q9H5J0 574 aa7.54□□□□□ -1.2
HDAC8-212ENST00000421523 NSFL1CQ9UNZ2 370 aaKnown RBP7.54□□□□□ -1.2
HDAC8-212ENST00000421523 ALPK3Q96L96 1907 aa7.54□□□□□ -1.2
HDAC8-212ENST00000421523 LAMB2P55268 1798 aa7.54□□□□□ -1.2
HDAC8-212ENST00000421523 LRRC37AA6NMS7 1700 aa7.53□□□□□ -1.2
HDAC8-212ENST00000421523 DIAPH1O60610 1272 aaKnown RBP7.53□□□□□ -1.2
HDAC8-212ENST00000421523 GJB1P08034 283 aa7.53□□□□□ -1.2
HDAC8-212ENST00000421523 VIL1P09327 827 aaKnown RBP7.53□□□□□ -1.2
HDAC8-212ENST00000421523 USP17L8P0C7I0 530 aa7.53□□□□□ -1.2
HDAC8-212ENST00000421523 MAGEA10P43363 369 aaPredicted RBP7.53□□□□□ -1.2
HDAC8-212ENST00000421523 CC2D1BQ5T0F9 858 aaKnown RBP7.53□□□□□ -1.2
HDAC8-212ENST00000421523 LDLRAD1Q5T700 205 aa7.53□□□□□ -1.2
HDAC8-212ENST00000421523 KIF6Q6ZMV9 814 aa7.53□□□□□ -1.2
HDAC8-212ENST00000421523 DDX46Q7L014 1031 aaKnown RBP7.53□□□□□ -1.2
HDAC8-212ENST00000421523 IL17REQ8NFR9 667 aa7.53□□□□□ -1.2
HDAC8-212ENST00000421523 U2AF1L4Q8WU68 220 aaKnown RBP7.53□□□□□ -1.2
HDAC8-212ENST00000421523 UBE2OQ9C0C9 1292 aaKnown RBP7.53□□□□□ -1.2
HDAC8-212ENST00000421523 BIN2Q9UBW5 565 aaPredicted RBP7.53□□□□□ -1.2
HDAC8-212ENST00000421523 POLLQ9UGP5 575 aa7.53□□□□□ -1.2
HDAC8-212ENST00000421523 LAMB1P07942 1786 aa7.53□□□□□ -1.2
HDAC8-212ENST00000421523 G3V3G9 751 aa7.52□□□□□ -1.21
HDAC8-212ENST00000421523 SASH1O94885 1247 aa7.52□□□□□ -1.21
HDAC8-212ENST00000421523 SNRPA1P09661 255 aaKnown RBP7.52□□□□□ -1.21
HDAC8-212ENST00000421523 GJA5P36382 358 aa7.52□□□□□ -1.21
HDAC8-212ENST00000421523 GRAPQ13588 217 aa7.52□□□□□ -1.21
HDAC8-212ENST00000421523 KIF22Q14807 665 aa7.52□□□□□ -1.21
HDAC8-212ENST00000421523 TAF1CQ15572 869 aaPredicted RBP7.52□□□□□ -1.21
HDAC8-212ENST00000421523 DCAF8Q5TAQ9 597 aa7.52□□□□□ -1.21
HDAC8-212ENST00000421523 RSBN1LQ6PCB5 846 aaPredicted RBP7.52□□□□□ -1.21
HDAC8-212ENST00000421523 TTLL7Q6ZT98 887 aa7.52□□□□□ -1.21
HDAC8-212ENST00000421523 GRAPLQ8TC17 118 aaPredicted RBP7.52□□□□□ -1.21
HDAC8-212ENST00000421523 MAP3K15Q6ZN16 1313 aa7.52□□□□□ -1.21
HDAC8-212ENST00000421523 CEMIPQ8WUJ3 1361 aa7.51□□□□□ -1.21
HDAC8-212ENST00000421523 HCLS1P14317 486 aaPredicted RBP7.51□□□□□ -1.21
HDAC8-212ENST00000421523 GPSM2P81274 684 aa7.51□□□□□ -1.21
HDAC8-212ENST00000421523 TJAP1Q5JTD0 557 aa7.51□□□□□ -1.21
HDAC8-212ENST00000421523 ZNF697Q5TEC3 545 aa7.51□□□□□ -1.21
HDAC8-212ENST00000421523 PPP1R42Q7Z4L9 355 aa7.51□□□□□ -1.21
HDAC8-212ENST00000421523 CDX2Q99626 313 aaPredicted RBP7.51□□□□□ -1.21
HDAC8-212ENST00000421523 XIRP2A4UGR9 3374 aa7.51□□□□□ -1.21
HDAC8-212ENST00000421523 SYNGAP1Q96PV0 1343 aa7.51□□□□□ -1.21
HDAC8-212ENST00000421523 GNAT3A8MTJ3 354 aa7.5□□□□□ -1.21
HDAC8-212ENST00000421523 ERVV-1B6SEH8 477 aa7.5□□□□□ -1.21
HDAC8-212ENST00000421523 POTEB2H3BUK9 544 aa7.5□□□□□ -1.21
HDAC8-212ENST00000421523 GRK4P32298 578 aa7.5□□□□□ -1.21
HDAC8-212ENST00000421523 LACTBP83111 547 aaPredicted RBP7.5□□□□□ -1.21
HDAC8-212ENST00000421523 AGBL3Q8NEM8 1001 aa7.5□□□□□ -1.21
HDAC8-212ENST00000421523 RAET1EQ8TD07 263 aa7.5□□□□□ -1.21
HDAC8-212ENST00000421523 MYLIPQ8WY64 445 aa7.5□□□□□ -1.21
HDAC8-212ENST00000421523 ZNF428Q96B54 188 aa7.5□□□□□ -1.21
HDAC8-212ENST00000421523 PAWRQ96IZ0 340 aaKnown RBP7.5□□□□□ -1.21
HDAC8-212ENST00000421523 PHACTR3Q96KR7 559 aa7.5□□□□□ -1.21
HDAC8-212ENST00000421523 EYA3Q99504 573 aa7.5□□□□□ -1.21
HDAC8-212ENST00000421523 UNC93B1Q9H1C4 597 aa7.5□□□□□ -1.21
HDAC8-212ENST00000421523 ZFYVE28Q9HCC9 887 aa7.5□□□□□ -1.21
HDAC8-212ENST00000421523 RIPOR2Q9Y4F9 1068 aa7.5□□□□□ -1.21
HDAC8-212ENST00000421523 ANKRD36CQ5JPF3 1778 aa7.5□□□□□ -1.21
HDAC8-212ENST00000421523 SSC5DA1L4H1 1573 aa7.5□□□□□ -1.21
HDAC8-212ENST00000421523 NCOR1O75376 2440 aa7.49□□□□□ -1.21
HDAC8-212ENST00000421523 WNT10BO00744 389 aa7.49□□□□□ -1.21
HDAC8-212ENST00000421523 TFRCP02786 760 aaKnown RBP7.49□□□□□ -1.21
HDAC8-212ENST00000421523 MYL6BP14649 208 aa7.49□□□□□ -1.21
HDAC8-212ENST00000421523 FAM109BQ6ICB4 259 aaPredicted RBP7.49□□□□□ -1.21
HDAC8-212ENST00000421523 ZNF34Q8IZ26 560 aa7.49□□□□□ -1.21
HDAC8-212ENST00000421523 TBC1D16Q8TBP0 767 aa7.49□□□□□ -1.21
HDAC8-212ENST00000421523 DIS3LQ8TF46 1054 aaKnown RBP7.49□□□□□ -1.21
HDAC8-212ENST00000421523 UTP14AQ9BVJ6 771 aaKnown RBP7.49□□□□□ -1.21
HDAC8-212ENST00000421523 ZC3H12CQ9C0D7 883 aaKnown RBP7.49□□□□□ -1.21
HDAC8-212ENST00000421523 RSPH6AQ9H0K4 717 aa7.49□□□□□ -1.21
HDAC8-212ENST00000421523 HCN4Q9Y3Q4 1203 aa7.49□□□□□ -1.21
HDAC8-212ENST00000421523 COL4A1P02462 1669 aa7.48□□□□□ -1.21
HDAC8-212ENST00000421523 MUC6Q6W4X9 2439 aa7.48□□□□□ -1.21
HDAC8-212ENST00000421523 CCL15-CCL14A0A0B4J2E2 113 aa7.48□□□□□ -1.21
HDAC8-212ENST00000421523 UFL1O94874 794 aa7.48□□□□□ -1.21
HDAC8-212ENST00000421523 SGPL1O95470 568 aa7.48□□□□□ -1.21
HDAC8-212ENST00000421523 FOSL2P15408 326 aa7.48□□□□□ -1.21
HDAC8-212ENST00000421523 UBXN2AP68543 259 aa7.48□□□□□ -1.21
HDAC8-212ENST00000421523 CCL15Q16663 113 aa7.48□□□□□ -1.21
HDAC8-212ENST00000421523 TMC4Q7Z404 712 aa7.48□□□□□ -1.21
HDAC8-212ENST00000421523 ALYREFQ86V81 257 aaKnown RBP7.48□□□□□ -1.21
HDAC8-212ENST00000421523 APOBEC3FQ8IUX4 373 aaKnown RBP7.48□□□□□ -1.21
HDAC8-212ENST00000421523 FAM43AQ8N2R8 423 aa7.48□□□□□ -1.21
HDAC8-212ENST00000421523 GAS2L2Q8NHY3 880 aa7.48□□□□□ -1.21
HDAC8-212ENST00000421523 BRI3BPQ8WY22 251 aa7.48□□□□□ -1.21
HDAC8-212ENST00000421523 FBXW7Q969H0 707 aa7.48□□□□□ -1.21
HDAC8-212ENST00000421523 DEFB118Q96PH6 123 aa7.48□□□□□ -1.21
HDAC8-212ENST00000421523 GMLQ99445 158 aa7.48□□□□□ -1.21
HDAC8-212ENST00000421523 MXD3Q9BW11 206 aa7.48□□□□□ -1.21
HDAC8-212ENST00000421523 ELP3Q9H9T3 547 aa7.48□□□□□ -1.21
HDAC8-212ENST00000421523 RRP7AQ9Y3A4 280 aaKnown RBP7.48□□□□□ -1.21
HDAC8-212ENST00000421523 WDFY4Q6ZS81 3184 aa7.48□□□□□ -1.21
HDAC8-212ENST00000421523 MYPNQ86TC9 1320 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms