RNA–Protein interactions for RNA: ENST00000420720.5

RFX3-205, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-205ENST00000420720 AOC3Q16853 763 aa9.32□□□□□ -0.92
RFX3-205ENST00000420720 GRIPAP1Q4V328 841 aa9.32□□□□□ -0.92
RFX3-205ENST00000420720 SLC10A5Q5PT55 438 aa9.32□□□□□ -0.92
RFX3-205ENST00000420720 NIM1KQ8IY84 436 aa9.32□□□□□ -0.92
RFX3-205ENST00000420720 XAGE3Q8WTP9 111 aa9.32□□□□□ -0.92
RFX3-205ENST00000420720 GLIS2Q9BZE0 524 aaPredicted RBP9.32□□□□□ -0.92
RFX3-205ENST00000420720 TMX4Q9H1E5 349 aaPredicted RBP9.32□□□□□ -0.92
RFX3-205ENST00000420720 ABCC4O15439 1325 aa9.31□□□□□ -0.92
RFX3-205ENST00000420720 HCLS1P14317 486 aaPredicted RBP9.31□□□□□ -0.92
RFX3-205ENST00000420720 LMOD3Q0VAK6 560 aa9.31□□□□□ -0.92
RFX3-205ENST00000420720 RALBP1Q15311 655 aa9.31□□□□□ -0.92
RFX3-205ENST00000420720 KRT24Q2M2I5 525 aa9.31□□□□□ -0.92
RFX3-205ENST00000420720 CCDC146Q8IYE0 955 aa9.31□□□□□ -0.92
RFX3-205ENST00000420720 ZNF428Q96B54 188 aa9.31□□□□□ -0.92
RFX3-205ENST00000420720 BABAM1Q9NWV8 329 aa9.31□□□□□ -0.92
RFX3-205ENST00000420720 ATP6V0A2Q9Y487 856 aa9.31□□□□□ -0.92
RFX3-205ENST00000420720 LAS1LQ9Y4W2 734 aaKnown RBP9.31□□□□□ -0.92
RFX3-205ENST00000420720 RBBP6Q7Z6E9 1792 aaKnown RBP9.31□□□□□ -0.92
RFX3-205ENST00000420720 TCIRG1Q13488 830 aa9.3□□□□□ -0.92
RFX3-205ENST00000420720 HSP90AB3PQ58FF7 597 aa9.3□□□□□ -0.92
RFX3-205ENST00000420720 USP50Q70EL3 339 aaPredicted RBP9.3□□□□□ -0.92
RFX3-205ENST00000420720 NLRP10Q86W26 655 aa9.3□□□□□ -0.92
RFX3-205ENST00000420720 ZNF408Q9H9D4 720 aa9.3□□□□□ -0.92
RFX3-205ENST00000420720 TRMT112Q9UI30 125 aaKnown RBP9.3□□□□□ -0.92
RFX3-205ENST00000420720 AKAP11Q9UKA4 1901 aa9.3□□□□□ -0.92
RFX3-205ENST00000420720 KDM3BQ7LBC6 1761 aa9.29□□□□□ -0.92
RFX3-205ENST00000420720 H0YGN5 161 aa9.29□□□□□ -0.92
RFX3-205ENST00000420720 BBOX1O75936 387 aa9.29□□□□□ -0.92
RFX3-205ENST00000420720 HUNKP57058 714 aa9.29□□□□□ -0.92
RFX3-205ENST00000420720 CXCL9Q07325 125 aa9.29□□□□□ -0.92
RFX3-205ENST00000420720 DDX10Q13206 875 aaKnown RBP9.29□□□□□ -0.92
RFX3-205ENST00000420720 FBXO46Q6PJ61 603 aaPredicted RBP9.29□□□□□ -0.92
RFX3-205ENST00000420720 DPP8Q6V1X1 898 aaPredicted RBP9.29□□□□□ -0.92
RFX3-205ENST00000420720 DDX46Q7L014 1031 aaKnown RBP9.29□□□□□ -0.92
RFX3-205ENST00000420720 SP8Q8IXZ3 490 aa9.29□□□□□ -0.92
RFX3-205ENST00000420720 SUPT20HQ8NEM7 779 aa9.29□□□□□ -0.92
RFX3-205ENST00000420720 ZNF296Q8WUU4 475 aaPredicted RBP9.29□□□□□ -0.92
RFX3-205ENST00000420720 VPS33BQ9H267 617 aa9.29□□□□□ -0.92
RFX3-205ENST00000420720 RBM27Q9P2N5 1060 aaKnown RBP9.29□□□□□ -0.92
RFX3-205ENST00000420720 ZNRF3Q9ULT6 936 aa9.29□□□□□ -0.92
RFX3-205ENST00000420720 LAMB4A4D0S4 1761 aa9.29□□□□□ -0.92
RFX3-205ENST00000420720 CHL1O00533 1208 aa9.28□□□□□ -0.92
RFX3-205ENST00000420720 GMPSP49915 693 aaPredicted RBP9.28□□□□□ -0.92
RFX3-205ENST00000420720 GRAPQ13588 217 aa9.28□□□□□ -0.92
RFX3-205ENST00000420720 HDGFL1Q5TGJ6 251 aa9.28□□□□□ -0.92
RFX3-205ENST00000420720 DLK2Q6UY11 383 aa9.28□□□□□ -0.92
RFX3-205ENST00000420720 GRAPLQ8TC17 118 aaPredicted RBP9.28□□□□□ -0.92
RFX3-205ENST00000420720 CSRNP1Q96S65 589 aa9.28□□□□□ -0.92
RFX3-205ENST00000420720 RTFDC1Q9BY42 306 aaPredicted RBP9.28□□□□□ -0.92
RFX3-205ENST00000420720 CRISPLD2Q9H0B8 497 aa9.28□□□□□ -0.92
RFX3-205ENST00000420720 ADARB2Q9NS39 739 aaKnown RBP9.28□□□□□ -0.92
RFX3-205ENST00000420720 GPRC5DQ9NZD1 345 aa9.28□□□□□ -0.92
RFX3-205ENST00000420720 CHPF2Q9P2E5 772 aa9.28□□□□□ -0.92
RFX3-205ENST00000420720 SH3TC1Q8TE82 1336 aa9.28□□□□□ -0.92
RFX3-205ENST00000420720 RAD17O75943 681 aa9.27□□□□□ -0.93
RFX3-205ENST00000420720 KIAA2012Q0VF49 1180 aa9.27□□□□□ -0.93
RFX3-205ENST00000420720 WDR43Q15061 677 aaKnown RBP eCLIP9.27□□□□□ -0.93
RFX3-205ENST00000420720 DMRTA1Q5VZB9 504 aa9.27□□□□□ -0.93
RFX3-205ENST00000420720 RGMBQ6NW40 437 aa9.27□□□□□ -0.93
RFX3-205ENST00000420720 RUNDC1Q96C34 613 aa9.27□□□□□ -0.93
RFX3-205ENST00000420720 BCL2L13Q9BXK5 485 aa9.27□□□□□ -0.93
RFX3-205ENST00000420720 PRDM6Q9NQX0 595 aa9.27□□□□□ -0.93
RFX3-205ENST00000420720 MYBBP1AQ9BQG0 1328 aaKnown RBP9.27□□□□□ -0.93
RFX3-205ENST00000420720 ATP5J2-PTCD1G3V325 749 aa9.26□□□□□ -0.93
RFX3-205ENST00000420720 EN2P19622 333 aaPredicted RBP9.26□□□□□ -0.93
RFX3-205ENST00000420720 PSEN2P49810 448 aa9.26□□□□□ -0.93
RFX3-205ENST00000420720 RTL5Q5HYW3 569 aaPredicted RBP9.26□□□□□ -0.93
RFX3-205ENST00000420720 FAM89AQ96GI7 184 aa9.26□□□□□ -0.93
RFX3-205ENST00000420720 PGAP2Q9UHJ9 254 aa9.26□□□□□ -0.93
RFX3-205ENST00000420720 HDAC9Q9UKV0 1011 aa9.26□□□□□ -0.93
RFX3-205ENST00000420720 ADAMTS8Q9UP79 889 aa9.26□□□□□ -0.93
RFX3-205ENST00000420720 SHTN1A0MZ66 631 aa9.25□□□□□ -0.93
RFX3-205ENST00000420720 YDJCA8MPS7 323 aa9.25□□□□□ -0.93
RFX3-205ENST00000420720 SOX1O00570 391 aaPredicted RBP9.25□□□□□ -0.93
RFX3-205ENST00000420720 HIRAP54198 1017 aaPredicted RBP9.25□□□□□ -0.93
RFX3-205ENST00000420720 TNIP1Q15025 636 aa9.25□□□□□ -0.93
RFX3-205ENST00000420720 ADGRD1Q6QNK2 874 aa9.25□□□□□ -0.93
RFX3-205ENST00000420720 PLBD2Q8NHP8 589 aa9.25□□□□□ -0.93
RFX3-205ENST00000420720 TRPM4Q8TD43 1214 aa9.25□□□□□ -0.93
RFX3-205ENST00000420720 CELF1Q92879 486 aaKnown RBP9.25□□□□□ -0.93
RFX3-205ENST00000420720 ISCA1Q9BUE6 129 aa9.25□□□□□ -0.93
RFX3-205ENST00000420720 DBF4Q9UBU7 674 aaPredicted RBP9.25□□□□□ -0.93
RFX3-205ENST00000420720 CNOT7Q9UIV1 285 aaKnown RBP9.25□□□□□ -0.93
RFX3-205ENST00000420720 NSFL1CQ9UNZ2 370 aaKnown RBP9.25□□□□□ -0.93
RFX3-205ENST00000420720 NUP98P52948 1817 aa9.25□□□□□ -0.93
RFX3-205ENST00000420720 DLG5Q8TDM6 1919 aa9.25□□□□□ -0.93
RFX3-205ENST00000420720 C6orf229H3BNL8 230 aa9.24□□□□□ -0.93
RFX3-205ENST00000420720 ARHGAP33O14559 1287 aa9.24□□□□□ -0.93
RFX3-205ENST00000420720 HOXB7P09629 217 aa9.24□□□□□ -0.93
RFX3-205ENST00000420720 SF3B3Q15393 1217 aaKnown RBP9.24□□□□□ -0.93
RFX3-205ENST00000420720 DUSP27Q5VZP5 1158 aa9.24□□□□□ -0.93
RFX3-205ENST00000420720 OXER1Q8TDS5 423 aa9.24□□□□□ -0.93
RFX3-205ENST00000420720 PRO3102Q9H379 93 aa9.24□□□□□ -0.93
RFX3-205ENST00000420720 RAPGEFL1Q9UHV5 662 aa9.24□□□□□ -0.93
RFX3-205ENST00000420720 MUC3AQ02505 3323 aa9.24□□□□□ -0.93
RFX3-205ENST00000420720 KIAA0100Q14667 2235 aaKnown RBP9.24□□□□□ -0.93
RFX3-205ENST00000420720 EYSQ5T1H1 3165 aa9.23□□□□□ -0.93
RFX3-205ENST00000420720 H7C1D1 291 aa9.23□□□□□ -0.93
RFX3-205ENST00000420720 ELL2O00472 640 aaPredicted RBP9.23□□□□□ -0.93
RFX3-205ENST00000420720 IRS4O14654 1257 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms