RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 CST9Q5W186 159 aa22.8■■□□□ 1.24
ECHDC3-202ENST00000420401 LDHAL6AQ6ZMR3 332 aa22.8■■□□□ 1.24
ECHDC3-202ENST00000420401 FTSJ3Q8IY81 847 aaKnown RBP22.8■■□□□ 1.24
ECHDC3-202ENST00000420401 TLL2Q9Y6L7 1015 aa22.8■■□□□ 1.24
ECHDC3-202ENST00000420401 GNAI3P08754 354 aa22.79■■□□□ 1.24
ECHDC3-202ENST00000420401 MAP2K2P36507 400 aa22.79■■□□□ 1.24
ECHDC3-202ENST00000420401 ZNF594Q96JF6 807 aaPredicted RBP22.79■■□□□ 1.24
ECHDC3-202ENST00000420401 CNNM1Q9NRU3 951 aa22.79■■□□□ 1.24
ECHDC3-202ENST00000420401 TNNQ9UQP3 1299 aa22.79■■□□□ 1.24
ECHDC3-202ENST00000420401 LEMD3Q9Y2U8 911 aa22.79■■□□□ 1.24
ECHDC3-202ENST00000420401 G3V3G9 751 aa22.78■■□□□ 1.24
ECHDC3-202ENST00000420401 CHRNDQ07001 517 aa22.78■■□□□ 1.24
ECHDC3-202ENST00000420401 DCAF8Q5TAQ9 597 aa22.78■■□□□ 1.24
ECHDC3-202ENST00000420401 DZIP1LQ8IYY4 767 aaKnown RBP22.78■■□□□ 1.24
ECHDC3-202ENST00000420401 YTHDC1Q96MU7 727 aaKnown RBP22.78■■□□□ 1.24
ECHDC3-202ENST00000420401 MEIS3Q99687 375 aa22.78■■□□□ 1.24
ECHDC3-202ENST00000420401 ADARB2Q9NS39 739 aaKnown RBP22.78■■□□□ 1.24
ECHDC3-202ENST00000420401 TSKSQ9UJT2 592 aa22.78■■□□□ 1.24
ECHDC3-202ENST00000420401 RCAN3Q9UKA8 241 aa22.78■■□□□ 1.24
ECHDC3-202ENST00000420401 CASP8AP2Q9UKL3 1982 aa22.78■■□□□ 1.24
ECHDC3-202ENST00000420401 AOC2O75106 756 aa22.77■■□□□ 1.24
ECHDC3-202ENST00000420401 TMEM57Q8N5G2 664 aa22.77■■□□□ 1.24
ECHDC3-202ENST00000420401 MS4A1P11836 297 aa22.76■■□□□ 1.23
ECHDC3-202ENST00000420401 KCNJ4P48050 445 aa22.76■■□□□ 1.23
ECHDC3-202ENST00000420401 TNIP1Q15025 636 aa22.76■■□□□ 1.23
ECHDC3-202ENST00000420401 DBNDD1Q9H9R9 158 aa22.76■■□□□ 1.23
ECHDC3-202ENST00000420401 GPRC5DQ9NZD1 345 aa22.76■■□□□ 1.23
ECHDC3-202ENST00000420401 LRRFIP2Q9Y608 721 aaKnown RBP22.76■■□□□ 1.23
ECHDC3-202ENST00000420401 CELF2O95319 508 aaKnown RBP22.75■■□□□ 1.23
ECHDC3-202ENST00000420401 CXCL9Q07325 125 aa22.75■■□□□ 1.23
ECHDC3-202ENST00000420401 DOK7Q18PE1 504 aa22.75■■□□□ 1.23
ECHDC3-202ENST00000420401 ZNF804BA4D1E1 1349 aa22.75■■□□□ 1.23
ECHDC3-202ENST00000420401 CA12O43570 354 aa22.74■■□□□ 1.23
ECHDC3-202ENST00000420401 ECE2O60344 883 aa22.74■■□□□ 1.23
ECHDC3-202ENST00000420401 RGS19P49795 217 aa22.74■■□□□ 1.23
ECHDC3-202ENST00000420401 CIAPIN1Q6FI81 312 aa22.74■■□□□ 1.23
ECHDC3-202ENST00000420401 MED23Q9ULK4 1368 aa22.74■■□□□ 1.23
ECHDC3-202ENST00000420401 SAPCD2Q86UD0 394 aa22.73■■□□□ 1.23
ECHDC3-202ENST00000420401 SPEF2Q9C093 1822 aa22.73■■□□□ 1.23
ECHDC3-202ENST00000420401 YDJCA8MPS7 323 aa22.72■■□□□ 1.23
ECHDC3-202ENST00000420401 TAF5LO75529 589 aa22.72■■□□□ 1.23
ECHDC3-202ENST00000420401 RAD17O75943 681 aa22.72■■□□□ 1.23
ECHDC3-202ENST00000420401 GNAI2P04899 355 aa22.72■■□□□ 1.23
ECHDC3-202ENST00000420401 ITPRIPQ8IWB1 547 aa22.72■■□□□ 1.23
ECHDC3-202ENST00000420401 HELBQ8NG08 1087 aaPredicted RBP22.72■■□□□ 1.23
ECHDC3-202ENST00000420401 ZNF408Q9H9D4 720 aa22.72■■□□□ 1.23
ECHDC3-202ENST00000420401 MROH5Q6ZUA9 1318 aa22.72■■□□□ 1.23
ECHDC3-202ENST00000420401 WTIPA6NIX2 430 aaPredicted RBP22.71■■□□□ 1.23
ECHDC3-202ENST00000420401 PLIN1O60240 522 aa22.71■■□□□ 1.23
ECHDC3-202ENST00000420401 GLIS2Q9BZE0 524 aaPredicted RBP22.71■■□□□ 1.23
ECHDC3-202ENST00000420401 RLBP1P12271 317 aa22.7■■□□□ 1.22
ECHDC3-202ENST00000420401 GMPSP49915 693 aaPredicted RBP22.7■■□□□ 1.22
ECHDC3-202ENST00000420401 PODNQ7Z5L7 613 aa22.7■■□□□ 1.22
ECHDC3-202ENST00000420401 HHIPL1Q96JK4 782 aa22.7■■□□□ 1.22
ECHDC3-202ENST00000420401 PUS3Q9BZE2 481 aaKnown RBP22.7■■□□□ 1.22
ECHDC3-202ENST00000420401 MCOLN1Q9GZU1 580 aa22.7■■□□□ 1.22
ECHDC3-202ENST00000420401 RIPOR2Q9Y4F9 1068 aa22.7■■□□□ 1.22
ECHDC3-202ENST00000420401 RFX5P48382 616 aaPredicted RBP22.69■■□□□ 1.22
ECHDC3-202ENST00000420401 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.69■■□□□ 1.22
ECHDC3-202ENST00000420401 KLHDC4Q8TBB5 520 aa22.69■■□□□ 1.22
ECHDC3-202ENST00000420401 COA1Q9GZY4 146 aa22.69■■□□□ 1.22
ECHDC3-202ENST00000420401 LRRC24Q50LG9 513 aa22.68■■□□□ 1.22
ECHDC3-202ENST00000420401 METTL24Q5JXM2 366 aa22.68■■□□□ 1.22
ECHDC3-202ENST00000420401 EYA2O00167 538 aa22.67■■□□□ 1.22
ECHDC3-202ENST00000420401 PSMD14O00487 310 aa22.67■■□□□ 1.22
ECHDC3-202ENST00000420401 PTPN12Q05209 780 aaKnown RBP22.67■■□□□ 1.22
ECHDC3-202ENST00000420401 DGKZQ13574 1117 aa22.67■■□□□ 1.22
ECHDC3-202ENST00000420401 C15orf52Q6ZUT6 534 aaKnown RBP22.67■■□□□ 1.22
ECHDC3-202ENST00000420401 PANK1Q8TE04 598 aa22.67■■□□□ 1.22
ECHDC3-202ENST00000420401 FBXO3Q9UK99 471 aa22.67■■□□□ 1.22
ECHDC3-202ENST00000420401 ZBTB7BO15156 539 aaPredicted RBP22.66■■□□□ 1.22
ECHDC3-202ENST00000420401 SRGAP3O43295 1099 aa22.66■■□□□ 1.22
ECHDC3-202ENST00000420401 UBE4AQ14139 1066 aa22.66■■□□□ 1.22
ECHDC3-202ENST00000420401 CDC37L1Q7L3B6 337 aa22.66■■□□□ 1.22
ECHDC3-202ENST00000420401 TXNRD3Q86VQ6 643 aa22.66■■□□□ 1.22
ECHDC3-202ENST00000420401 ZC3H15Q8WU90 426 aaKnown RBP22.66■■□□□ 1.22
ECHDC3-202ENST00000420401 KCNQ5Q9NR82 932 aa22.66■■□□□ 1.22
ECHDC3-202ENST00000420401 PGAP2Q9UHJ9 254 aa22.66■■□□□ 1.22
ECHDC3-202ENST00000420401 SNAP23O00161 211 aa22.65■■□□□ 1.22
ECHDC3-202ENST00000420401 RPS12P25398 132 aaKnown RBP22.65■■□□□ 1.22
ECHDC3-202ENST00000420401 KLRK1P26718 216 aa22.65■■□□□ 1.22
ECHDC3-202ENST00000420401 MTX1Q13505 466 aa22.65■■□□□ 1.22
ECHDC3-202ENST00000420401 USP17L3A6NCW0 530 aa22.64■■□□□ 1.21
ECHDC3-202ENST00000420401 USP17L4A6NCW7 530 aa22.64■■□□□ 1.21
ECHDC3-202ENST00000420401 CIAO1O76071 339 aa22.64■■□□□ 1.21
ECHDC3-202ENST00000420401 PDE8BO95263 885 aa22.64■■□□□ 1.21
ECHDC3-202ENST00000420401 VIL1P09327 827 aaKnown RBP22.64■■□□□ 1.21
ECHDC3-202ENST00000420401 USP17L1Q7RTZ2 530 aa22.64■■□□□ 1.21
ECHDC3-202ENST00000420401 ZNF804AQ7Z570 1209 aa22.64■■□□□ 1.21
ECHDC3-202ENST00000420401 DPF2Q92785 391 aa22.64■■□□□ 1.21
ECHDC3-202ENST00000420401 COPRSQ9NQ92 184 aa22.64■■□□□ 1.21
ECHDC3-202ENST00000420401 H7C1D1 291 aa22.63■■□□□ 1.21
ECHDC3-202ENST00000420401 NOGQ13253 232 aa22.63■■□□□ 1.21
ECHDC3-202ENST00000420401 SIL1Q9H173 461 aa22.63■■□□□ 1.21
ECHDC3-202ENST00000420401 CNOT7Q9UIV1 285 aaKnown RBP22.63■■□□□ 1.21
ECHDC3-202ENST00000420401 ZBTB12Q9Y330 459 aaPredicted RBP22.63■■□□□ 1.21
ECHDC3-202ENST00000420401 POLR2AP24928 1970 aaKnown RBP22.63■■□□□ 1.21
ECHDC3-202ENST00000420401 IRS2Q9Y4H2 1338 aa22.62■■□□□ 1.21
ECHDC3-202ENST00000420401 HIRAP54198 1017 aaPredicted RBP22.62■■□□□ 1.21
ECHDC3-202ENST00000420401 CD209Q9NNX6 404 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms