RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 GNASQ5JWF2 1037 aa9.37□□□□□ -0.91
EPHA4-205ENST00000419964 PHLDB3Q6NSJ2 640 aa9.37□□□□□ -0.91
EPHA4-205ENST00000419964 TRIM46Q7Z4K8 759 aa9.37□□□□□ -0.91
EPHA4-205ENST00000419964 STAG2Q8N3U4 1231 aa9.37□□□□□ -0.91
EPHA4-205ENST00000419964 SLC26A8Q96RN1 970 aa9.37□□□□□ -0.91
EPHA4-205ENST00000419964 AAASQ9NRG9 546 aa9.37□□□□□ -0.91
EPHA4-205ENST00000419964 IQSEC3Q9UPP2 1182 aaPredicted RBP9.37□□□□□ -0.91
EPHA4-205ENST00000419964 MAPK8IP3Q9UPT6 1336 aa9.36□□□□□ -0.91
EPHA4-205ENST00000419964 NKTRP30414 1462 aaKnown RBP9.36□□□□□ -0.91
EPHA4-205ENST00000419964 TTLL8A6PVC2 850 aa9.36□□□□□ -0.91
EPHA4-205ENST00000419964 APAF1O14727 1248 aa9.36□□□□□ -0.91
EPHA4-205ENST00000419964 C21orf2O43822 256 aa9.36□□□□□ -0.91
EPHA4-205ENST00000419964 ARID4AP29374 1257 aaPredicted RBP9.36□□□□□ -0.91
EPHA4-205ENST00000419964 SLFN5Q08AF3 891 aa9.36□□□□□ -0.91
EPHA4-205ENST00000419964 TBCELQ5QJ74 424 aa9.36□□□□□ -0.91
EPHA4-205ENST00000419964 TAS1R3Q7RTX0 852 aa9.36□□□□□ -0.91
EPHA4-205ENST00000419964 RHBDD1Q8TEB9 315 aa9.36□□□□□ -0.91
EPHA4-205ENST00000419964 VTI1AQ96AJ9 217 aa9.36□□□□□ -0.91
EPHA4-205ENST00000419964 NIFKQ9BYG3 293 aaKnown RBP9.36□□□□□ -0.91
EPHA4-205ENST00000419964 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.36□□□□□ -0.91
EPHA4-205ENST00000419964 CDK12Q9NYV4 1490 aaPredicted RBP9.35□□□□□ -0.91
EPHA4-205ENST00000419964 ST8SIA5O15466 376 aa9.35□□□□□ -0.91
EPHA4-205ENST00000419964 CT47B1P0C2W7 299 aaPredicted RBP9.35□□□□□ -0.91
EPHA4-205ENST00000419964 U2AF1L5P0DN76 240 aaPredicted RBP9.35□□□□□ -0.91
EPHA4-205ENST00000419964 U2AF1Q01081 240 aaKnown RBP eCLIP9.35□□□□□ -0.91
EPHA4-205ENST00000419964 FOXD4L5Q5VV16 416 aaPredicted RBP9.35□□□□□ -0.91
EPHA4-205ENST00000419964 TRMT2AQ8IZ69 625 aaKnown RBP9.35□□□□□ -0.91
EPHA4-205ENST00000419964 PTPRUQ92729 1446 aa9.35□□□□□ -0.91
EPHA4-205ENST00000419964 ZFP42Q96MM3 310 aa9.35□□□□□ -0.91
EPHA4-205ENST00000419964 MYH16Q9H6N6 1097 aa9.35□□□□□ -0.91
EPHA4-205ENST00000419964 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.35□□□□□ -0.91
EPHA4-205ENST00000419964 COL3A1P02461 1466 aaPredicted RBP9.34□□□□□ -0.91
EPHA4-205ENST00000419964 IQSEC2Q5JU85 1478 aa9.34□□□□□ -0.91
EPHA4-205ENST00000419964 SERTM1A2A2V5 107 aa9.34□□□□□ -0.91
EPHA4-205ENST00000419964 PTCD1O75127 700 aaKnown RBP9.34□□□□□ -0.91
EPHA4-205ENST00000419964 CALD1Q05682 793 aaKnown RBP9.34□□□□□ -0.91
EPHA4-205ENST00000419964 FKBP5Q13451 457 aaPredicted RBP9.34□□□□□ -0.91
EPHA4-205ENST00000419964 TEAD4Q15561 434 aa9.34□□□□□ -0.91
EPHA4-205ENST00000419964 DUSP27Q5VZP5 1158 aa9.34□□□□□ -0.91
EPHA4-205ENST00000419964 LYSMD3Q7Z3D4 306 aa9.34□□□□□ -0.91
EPHA4-205ENST00000419964 CCDC146Q8IYE0 955 aa9.34□□□□□ -0.91
EPHA4-205ENST00000419964 RNF217Q8TC41 542 aa9.34□□□□□ -0.91
EPHA4-205ENST00000419964 COL26A1Q96A83 441 aa9.34□□□□□ -0.91
EPHA4-205ENST00000419964 ATP13A2Q9NQ11 1180 aa9.34□□□□□ -0.91
EPHA4-205ENST00000419964 USP3Q9Y6I4 520 aa9.34□□□□□ -0.91
EPHA4-205ENST00000419964 SOS2Q07890 1332 aaPredicted RBP9.33□□□□□ -0.92
EPHA4-205ENST00000419964 USP6P35125 1406 aa9.33□□□□□ -0.92
EPHA4-205ENST00000419964 SPATA31C2B4DYI2 1134 aa9.33□□□□□ -0.92
EPHA4-205ENST00000419964 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.33□□□□□ -0.92
EPHA4-205ENST00000419964 TCP11L2Q8N4U5 519 aa9.33□□□□□ -0.92
EPHA4-205ENST00000419964 C2orf49Q9BVC5 232 aaPredicted RBP9.33□□□□□ -0.92
EPHA4-205ENST00000419964 ZNF232Q9UNY5 417 aa9.33□□□□□ -0.92
EPHA4-205ENST00000419964 GNEQ9Y223 722 aaKnown RBP9.33□□□□□ -0.92
EPHA4-205ENST00000419964 NRKQ7Z2Y5 1582 aa9.33□□□□□ -0.92
EPHA4-205ENST00000419964 IL16Q14005 1332 aa9.32□□□□□ -0.92
EPHA4-205ENST00000419964 NPHP4O75161 1426 aaPredicted RBP9.32□□□□□ -0.92
EPHA4-205ENST00000419964 LRRC7Q96NW7 1537 aa9.32□□□□□ -0.92
EPHA4-205ENST00000419964 U2SURPO15042 1029 aaKnown RBP9.32□□□□□ -0.92
EPHA4-205ENST00000419964 NOS2P35228 1153 aa9.32□□□□□ -0.92
EPHA4-205ENST00000419964 LMOD3Q0VAK6 560 aa9.32□□□□□ -0.92
EPHA4-205ENST00000419964 AAMPQ13685 434 aa9.32□□□□□ -0.92
EPHA4-205ENST00000419964 WDR44Q5JSH3 913 aa9.32□□□□□ -0.92
EPHA4-205ENST00000419964 CCDC136Q96JN2 1154 aa9.32□□□□□ -0.92
EPHA4-205ENST00000419964 KIF24Q5T7B8 1368 aa9.32□□□□□ -0.92
EPHA4-205ENST00000419964 ACEP12821 1306 aa9.31□□□□□ -0.92
EPHA4-205ENST00000419964 TTC21BQ7Z4L5 1316 aa9.31□□□□□ -0.92
EPHA4-205ENST00000419964 CHD2O14647 1828 aaKnown RBP9.31□□□□□ -0.92
EPHA4-205ENST00000419964 HIRAP54198 1017 aaPredicted RBP9.31□□□□□ -0.92
EPHA4-205ENST00000419964 IRX6P78412 446 aaPredicted RBP9.31□□□□□ -0.92
EPHA4-205ENST00000419964 POTEAQ6S8J7 498 aa9.31□□□□□ -0.92
EPHA4-205ENST00000419964 PRICKLE2Q7Z3G6 844 aa9.31□□□□□ -0.92
EPHA4-205ENST00000419964 ZNF295-AS1Q8N0V1 137 aa9.31□□□□□ -0.92
EPHA4-205ENST00000419964 MKNK1Q9BUB5 465 aa9.31□□□□□ -0.92
EPHA4-205ENST00000419964 POLKQ9UBT6 870 aa9.31□□□□□ -0.92
EPHA4-205ENST00000419964 FMN2Q9NZ56 1722 aa9.31□□□□□ -0.92
EPHA4-205ENST00000419964 PRR36Q9H6K5 1346 aa9.31□□□□□ -0.92
EPHA4-205ENST00000419964 USP31Q70CQ4 1352 aa9.3□□□□□ -0.92
EPHA4-205ENST00000419964 FIGNL2A6NMB9 653 aa9.3□□□□□ -0.92
EPHA4-205ENST00000419964 POU4F2Q12837 409 aa9.3□□□□□ -0.92
EPHA4-205ENST00000419964 C4orf17Q53FE4 359 aa9.3□□□□□ -0.92
EPHA4-205ENST00000419964 NBPF10Q6P3W6 841 aaKnown RBP9.3□□□□□ -0.92
EPHA4-205ENST00000419964 NGDNQ8NEJ9 315 aaKnown RBP9.3□□□□□ -0.92
EPHA4-205ENST00000419964 SENP2Q9HC62 589 aa9.3□□□□□ -0.92
EPHA4-205ENST00000419964 OVOS2A0A0J9YW53 1432 aa9.3□□□□□ -0.92
EPHA4-205ENST00000419964 OVOS2Q6IE36 1432 aa9.3□□□□□ -0.92
EPHA4-205ENST00000419964 EML1O00423 815 aa9.29□□□□□ -0.92
EPHA4-205ENST00000419964 MAN1A2O60476 641 aa9.29□□□□□ -0.92
EPHA4-205ENST00000419964 KCNA6P17658 529 aa9.29□□□□□ -0.92
EPHA4-205ENST00000419964 PLA2G4AP47712 749 aa9.29□□□□□ -0.92
EPHA4-205ENST00000419964 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.29□□□□□ -0.92
EPHA4-205ENST00000419964 Q6ZNB5 142 aa9.29□□□□□ -0.92
EPHA4-205ENST00000419964 NME9Q86XW9 330 aa9.29□□□□□ -0.92
EPHA4-205ENST00000419964 ZDHHC1Q8WTX9 485 aa9.29□□□□□ -0.92
EPHA4-205ENST00000419964 KIFC2Q96AC6 838 aa9.29□□□□□ -0.92
EPHA4-205ENST00000419964 PLEKHF1Q96S99 279 aa9.29□□□□□ -0.92
EPHA4-205ENST00000419964 DACH1Q9UI36 760 aa9.29□□□□□ -0.92
EPHA4-205ENST00000419964 IVNS1ABPQ9Y6Y0 642 aa9.29□□□□□ -0.92
EPHA4-205ENST00000419964 SSH2Q76I76 1423 aa9.29□□□□□ -0.92
EPHA4-205ENST00000419964 ADGRL3Q9HAR2 1447 aa9.29□□□□□ -0.92
EPHA4-205ENST00000419964 NWD1Q149M9 1564 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms