RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 PBX4Q9BYU1 374 aa6.67□□□□□ -1.34
SDCBPP3-201ENST00000419629 C7orf69Q9H7B7 122 aa6.67□□□□□ -1.34
SDCBPP3-201ENST00000419629 BTBD11A6QL63 1104 aa6.66□□□□□ -1.34
SDCBPP3-201ENST00000419629 DDX3YO15523 660 aaKnown RBP6.66□□□□□ -1.34
SDCBPP3-201ENST00000419629 PAX4O43316 350 aa6.66□□□□□ -1.34
SDCBPP3-201ENST00000419629 ADAM11O75078 769 aa6.66□□□□□ -1.34
SDCBPP3-201ENST00000419629 ADAMTS4O75173 837 aa6.66□□□□□ -1.34
SDCBPP3-201ENST00000419629 DUOXA2Q1HG44 320 aa6.66□□□□□ -1.34
SDCBPP3-201ENST00000419629 RNF43Q68DV7 783 aa6.66□□□□□ -1.34
SDCBPP3-201ENST00000419629 FOXD4L4Q8WXT5 416 aaPredicted RBP6.66□□□□□ -1.34
SDCBPP3-201ENST00000419629 UTP4Q969X6 686 aaKnown RBP6.66□□□□□ -1.34
SDCBPP3-201ENST00000419629 FMNL2Q96PY5 1086 aa6.66□□□□□ -1.34
SDCBPP3-201ENST00000419629 MKNK1Q9BUB5 465 aa6.66□□□□□ -1.34
SDCBPP3-201ENST00000419629 ADAM19Q9H013 955 aa6.66□□□□□ -1.34
SDCBPP3-201ENST00000419629 SH2B1Q9NRF2 756 aaPredicted RBP6.66□□□□□ -1.34
SDCBPP3-201ENST00000419629 ABI2Q9NYB9 513 aaPredicted RBP6.66□□□□□ -1.34
SDCBPP3-201ENST00000419629 STIM2Q9P246 746 aa6.66□□□□□ -1.34
SDCBPP3-201ENST00000419629 HMX2A2RU54 273 aa6.65□□□□□ -1.34
SDCBPP3-201ENST00000419629 PRR19A6NJB7 356 aa6.65□□□□□ -1.34
SDCBPP3-201ENST00000419629 IRAK1P51617 712 aa6.65□□□□□ -1.34
SDCBPP3-201ENST00000419629 GP2P55259 537 aaKnown RBP6.65□□□□□ -1.34
SDCBPP3-201ENST00000419629 UBASH3BQ8TF42 649 aa6.65□□□□□ -1.34
SDCBPP3-201ENST00000419629 KLHDC7BQ96G42 594 aa6.65□□□□□ -1.34
SDCBPP3-201ENST00000419629 MYRFLQ96LU7 910 aa6.65□□□□□ -1.34
SDCBPP3-201ENST00000419629 POP1Q99575 1024 aaKnown RBP6.65□□□□□ -1.34
SDCBPP3-201ENST00000419629 PTPRAP18433 802 aa6.64□□□□□ -1.35
SDCBPP3-201ENST00000419629 SPINK2P20155 84 aa6.64□□□□□ -1.35
SDCBPP3-201ENST00000419629 FAM117BQ6P1L5 589 aa6.64□□□□□ -1.35
SDCBPP3-201ENST00000419629 INTS5Q6P9B9 1019 aaKnown RBP6.64□□□□□ -1.35
SDCBPP3-201ENST00000419629 C14orf37Q86TY3 774 aa6.64□□□□□ -1.35
SDCBPP3-201ENST00000419629 DBNDD2Q9BQY9 259 aa6.64□□□□□ -1.35
SDCBPP3-201ENST00000419629 TXKP42681 527 aa6.63□□□□□ -1.35
SDCBPP3-201ENST00000419629 CLEC10AQ8IUN9 316 aa6.63□□□□□ -1.35
SDCBPP3-201ENST00000419629 FAM20CQ8IXL6 584 aa6.63□□□□□ -1.35
SDCBPP3-201ENST00000419629 ELP3Q9H9T3 547 aa6.63□□□□□ -1.35
SDCBPP3-201ENST00000419629 SEC31BQ9NQW1 1179 aa6.63□□□□□ -1.35
SDCBPP3-201ENST00000419629 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.63□□□□□ -1.35
SDCBPP3-201ENST00000419629 ATG7O95352 703 aa6.62□□□□□ -1.35
SDCBPP3-201ENST00000419629 TAL1P17542 331 aaPredicted RBP6.62□□□□□ -1.35
SDCBPP3-201ENST00000419629 PDE12Q6L8Q7 609 aaKnown RBP6.62□□□□□ -1.35
SDCBPP3-201ENST00000419629 NCAPG2Q86XI2 1143 aa6.62□□□□□ -1.35
SDCBPP3-201ENST00000419629 DTX1Q86Y01 620 aa6.62□□□□□ -1.35
SDCBPP3-201ENST00000419629 WNT8BQ93098 351 aa6.62□□□□□ -1.35
SDCBPP3-201ENST00000419629 FAM83CQ9BQN1 747 aa6.62□□□□□ -1.35
SDCBPP3-201ENST00000419629 TMEM63CQ9P1W3 806 aa6.62□□□□□ -1.35
SDCBPP3-201ENST00000419629 CNTN3Q9P232 1028 aa6.62□□□□□ -1.35
SDCBPP3-201ENST00000419629 KRTAP4-8A0A0G2JLE6 195 aa6.61□□□□□ -1.35
SDCBPP3-201ENST00000419629 H3BRJ5 948 aa6.61□□□□□ -1.35
SDCBPP3-201ENST00000419629 GRIK1P39086 918 aa6.61□□□□□ -1.35
SDCBPP3-201ENST00000419629 TMEM164Q5U3C3 297 aa6.61□□□□□ -1.35
SDCBPP3-201ENST00000419629 ZMYND15Q9H091 742 aa6.61□□□□□ -1.35
SDCBPP3-201ENST00000419629 SLAIN2Q9P270 581 aa6.61□□□□□ -1.35
SDCBPP3-201ENST00000419629 SALL4Q9UJQ4 1053 aa6.61□□□□□ -1.35
SDCBPP3-201ENST00000419629 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.6□□□□□ -1.35
SDCBPP3-201ENST00000419629 FAM177BA6PVY3 158 aa6.6□□□□□ -1.35
SDCBPP3-201ENST00000419629 NFKBIEO00221 500 aa6.6□□□□□ -1.35
SDCBPP3-201ENST00000419629 BMP3P12645 472 aa6.6□□□□□ -1.35
SDCBPP3-201ENST00000419629 PREPP48147 710 aa6.6□□□□□ -1.35
SDCBPP3-201ENST00000419629 PIP4K2BP78356 416 aa6.6□□□□□ -1.35
SDCBPP3-201ENST00000419629 ANKRD34AQ69YU3 496 aa6.6□□□□□ -1.35
SDCBPP3-201ENST00000419629 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.6□□□□□ -1.35
SDCBPP3-201ENST00000419629 BEND4Q6ZU67 534 aa6.6□□□□□ -1.35
SDCBPP3-201ENST00000419629 ABTB2Q8N961 1025 aa6.6□□□□□ -1.35
SDCBPP3-201ENST00000419629 CLP1Q92989 425 aaKnown RBP6.6□□□□□ -1.35
SDCBPP3-201ENST00000419629 NUDT16Q96DE0 195 aaKnown RBP6.6□□□□□ -1.35
SDCBPP3-201ENST00000419629 KANSL3Q9P2N6 904 aa6.6□□□□□ -1.35
SDCBPP3-201ENST00000419629 XKR5Q6UX68 686 aa6.59□□□□□ -1.35
SDCBPP3-201ENST00000419629 ATCAYQ86WG3 371 aa6.59□□□□□ -1.35
SDCBPP3-201ENST00000419629 SHKBP1Q8TBC3 707 aa6.59□□□□□ -1.35
SDCBPP3-201ENST00000419629 OSGEPQ9NPF4 335 aa6.59□□□□□ -1.35
SDCBPP3-201ENST00000419629 DZANK1Q9NVP4 752 aa6.59□□□□□ -1.35
SDCBPP3-201ENST00000419629 SEPT3Q9UH03 358 aa6.59□□□□□ -1.35
SDCBPP3-201ENST00000419629 SART1O43290 800 aaKnown RBP6.58□□□□□ -1.36
SDCBPP3-201ENST00000419629 ACPPP15309 386 aa6.58□□□□□ -1.36
SDCBPP3-201ENST00000419629 CABP4P57796 275 aa6.58□□□□□ -1.36
SDCBPP3-201ENST00000419629 ZNF438Q7Z4V0 828 aa6.58□□□□□ -1.36
SDCBPP3-201ENST00000419629 C1orf127Q8N9H9 656 aa6.58□□□□□ -1.36
SDCBPP3-201ENST00000419629 RNF208Q9H0X6 261 aa6.58□□□□□ -1.36
SDCBPP3-201ENST00000419629 MEGF11A6BM72 1044 aa6.57□□□□□ -1.36
SDCBPP3-201ENST00000419629 PDE2AO00408 941 aaPredicted RBP6.57□□□□□ -1.36
SDCBPP3-201ENST00000419629 TRPA1O75762 1119 aa6.57□□□□□ -1.36
SDCBPP3-201ENST00000419629 WNT11O96014 354 aa6.57□□□□□ -1.36
SDCBPP3-201ENST00000419629 NLRP12P59046 1061 aa6.57□□□□□ -1.36
SDCBPP3-201ENST00000419629 HGSNATQ68CP4 663 aa6.57□□□□□ -1.36
SDCBPP3-201ENST00000419629 HHIPQ96QV1 700 aa6.57□□□□□ -1.36
SDCBPP3-201ENST00000419629 RUSC1Q9BVN2 902 aa6.57□□□□□ -1.36
SDCBPP3-201ENST00000419629 GGNBP2Q9H3C7 697 aa6.57□□□□□ -1.36
SDCBPP3-201ENST00000419629 KCNF1Q9H3M0 494 aa6.57□□□□□ -1.36
SDCBPP3-201ENST00000419629 SOX13Q9UN79 622 aa6.57□□□□□ -1.36
SDCBPP3-201ENST00000419629 WDR64B1ANS9 1081 aa6.56□□□□□ -1.36
SDCBPP3-201ENST00000419629 RPLP1P05386 114 aaKnown RBP6.56□□□□□ -1.36
SDCBPP3-201ENST00000419629 CES1P23141 567 aa6.56□□□□□ -1.36
SDCBPP3-201ENST00000419629 HIF3AQ9Y2N7 669 aa6.56□□□□□ -1.36
SDCBPP3-201ENST00000419629 RNF114Q9Y508 228 aa6.56□□□□□ -1.36
SDCBPP3-201ENST00000419629 YBX3P16989 372 aaKnown RBP eCLIP6.55□□□□□ -1.36
SDCBPP3-201ENST00000419629 ATP2B4P23634 1241 aa6.55□□□□□ -1.36
SDCBPP3-201ENST00000419629 HOXA10P31260 410 aaPredicted RBP6.55□□□□□ -1.36
SDCBPP3-201ENST00000419629 FDX2Q6P4F2 183 aa6.55□□□□□ -1.36
SDCBPP3-201ENST00000419629 SLC7A3Q8WY07 619 aa6.55□□□□□ -1.36
SDCBPP3-201ENST00000419629 EDEM1Q92611 657 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms