RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 HELBQ8NG08 1087 aaPredicted RBP15.98■□□□□ 0.15
HMGN1P4-201ENST00000419500 TRPM4Q8TD43 1214 aa15.98■□□□□ 0.15
HMGN1P4-201ENST00000419500 FBXW7Q969H0 707 aa15.98■□□□□ 0.15
HMGN1P4-201ENST00000419500 USP44Q9H0E7 712 aa15.98■□□□□ 0.15
HMGN1P4-201ENST00000419500 ZNF609O15014 1411 aa15.97■□□□□ 0.15
HMGN1P4-201ENST00000419500 TMEM88BA6NKF7 163 aa15.97■□□□□ 0.15
HMGN1P4-201ENST00000419500 PLIN1O60240 522 aa15.97■□□□□ 0.15
HMGN1P4-201ENST00000419500 TAF5LO75529 589 aa15.97■□□□□ 0.15
HMGN1P4-201ENST00000419500 UBTFL1P0CB47 393 aaPredicted RBP15.97■□□□□ 0.15
HMGN1P4-201ENST00000419500 KLRK1P26718 216 aa15.97■□□□□ 0.15
HMGN1P4-201ENST00000419500 TBC1D10BQ4KMP7 808 aaPredicted RBP15.97■□□□□ 0.15
HMGN1P4-201ENST00000419500 AGBL3Q8NEM8 1001 aa15.97■□□□□ 0.15
HMGN1P4-201ENST00000419500 FRAT1Q92837 279 aaPredicted RBP15.97■□□□□ 0.15
HMGN1P4-201ENST00000419500 PCNTO95613 3336 aa15.97■□□□□ 0.15
HMGN1P4-201ENST00000419500 IPO8O15397 1037 aaKnown RBP15.96■□□□□ 0.15
HMGN1P4-201ENST00000419500 SAMD7Q7Z3H4 446 aa15.96■□□□□ 0.15
HMGN1P4-201ENST00000419500 TXNRD3Q86VQ6 643 aa15.96■□□□□ 0.15
HMGN1P4-201ENST00000419500 ANKRD44Q8N8A2 993 aa15.96■□□□□ 0.15
HMGN1P4-201ENST00000419500 ZC3H15Q8WU90 426 aaKnown RBP15.96■□□□□ 0.15
HMGN1P4-201ENST00000419500 ARHGAP45Q92619 1136 aa15.96■□□□□ 0.15
HMGN1P4-201ENST00000419500 MYO3BQ8WXR4 1341 aa15.95■□□□□ 0.14
HMGN1P4-201ENST00000419500 HIRAP54198 1017 aaPredicted RBP15.95■□□□□ 0.14
HMGN1P4-201ENST00000419500 KIF4BQ2VIQ3 1234 aa15.95■□□□□ 0.14
HMGN1P4-201ENST00000419500 RBM26Q5T8P6 1007 aaKnown RBP15.95■□□□□ 0.14
HMGN1P4-201ENST00000419500 ZNF804AQ7Z570 1209 aa15.95■□□□□ 0.14
HMGN1P4-201ENST00000419500 HDAC5Q9UQL6 1122 aa15.95■□□□□ 0.14
HMGN1P4-201ENST00000419500 MROH5Q6ZUA9 1318 aa15.94■□□□□ 0.14
HMGN1P4-201ENST00000419500 SNAP23O00161 211 aa15.94■□□□□ 0.14
HMGN1P4-201ENST00000419500 TRAF5O00463 557 aa15.94■□□□□ 0.14
HMGN1P4-201ENST00000419500 STRIP1Q5VSL9 837 aa15.94■□□□□ 0.14
HMGN1P4-201ENST00000419500 BCAR3O75815 825 aa15.93■□□□□ 0.14
HMGN1P4-201ENST00000419500 EGFRP00533 1210 aa15.93■□□□□ 0.14
HMGN1P4-201ENST00000419500 USP17L8P0C7I0 530 aa15.93■□□□□ 0.14
HMGN1P4-201ENST00000419500 DACT2Q5SW24 774 aa15.93■□□□□ 0.14
HMGN1P4-201ENST00000419500 C15orf52Q6ZUT6 534 aaKnown RBP15.93■□□□□ 0.14
HMGN1P4-201ENST00000419500 CDC37L1Q7L3B6 337 aa15.93■□□□□ 0.14
HMGN1P4-201ENST00000419500 OGFOD1Q8N543 542 aa15.93■□□□□ 0.14
HMGN1P4-201ENST00000419500 GLIS2Q9BZE0 524 aaPredicted RBP15.93■□□□□ 0.14
HMGN1P4-201ENST00000419500 PUS3Q9BZE2 481 aaKnown RBP15.93■□□□□ 0.14
HMGN1P4-201ENST00000419500 MKRN1Q9UHC7 482 aaKnown RBP15.93■□□□□ 0.14
HMGN1P4-201ENST00000419500 PGAP2Q9UHJ9 254 aa15.93■□□□□ 0.14
HMGN1P4-201ENST00000419500 ABT1Q9ULW3 272 aaKnown RBP15.93■□□□□ 0.14
HMGN1P4-201ENST00000419500 ZNF646O15015 1829 aaPredicted RBP15.92■□□□□ 0.14
HMGN1P4-201ENST00000419500 CNTNAP1P78357 1384 aa15.92■□□□□ 0.14
HMGN1P4-201ENST00000419500 TRIM27P14373 513 aa15.92■□□□□ 0.14
HMGN1P4-201ENST00000419500 ZNF280AP59817 542 aaPredicted RBP15.92■□□□□ 0.14
HMGN1P4-201ENST00000419500 GTF2IP78347 998 aa15.92■□□□□ 0.14
HMGN1P4-201ENST00000419500 UBE4AQ14139 1066 aa15.92■□□□□ 0.14
HMGN1P4-201ENST00000419500 METTL24Q5JXM2 366 aa15.92■□□□□ 0.14
HMGN1P4-201ENST00000419500 INTS3Q68E01 1043 aaKnown RBP15.92■□□□□ 0.14
HMGN1P4-201ENST00000419500 TTLL5Q6EMB2 1281 aa15.92■□□□□ 0.14
HMGN1P4-201ENST00000419500 ATF7IPQ6VMQ6 1270 aa15.92■□□□□ 0.14
HMGN1P4-201ENST00000419500 DCPSQ96C86 337 aaKnown RBP15.92■□□□□ 0.14
HMGN1P4-201ENST00000419500 CD209Q9NNX6 404 aa15.92■□□□□ 0.14
HMGN1P4-201ENST00000419500 MYOZ2Q9NPC6 264 aa15.92■□□□□ 0.14
HMGN1P4-201ENST00000419500 IRS2Q9Y4H2 1338 aa15.92■□□□□ 0.14
HMGN1P4-201ENST00000419500 TRPM7Q96QT4 1865 aa15.91■□□□□ 0.14
HMGN1P4-201ENST00000419500 FMR1Q06787 632 aaKnown RBP eCLIP15.91■□□□□ 0.14
HMGN1P4-201ENST00000419500 ZKSCAN2Q63HK3 967 aa15.91■□□□□ 0.14
HMGN1P4-201ENST00000419500 JMYQ8N9B5 988 aa15.91■□□□□ 0.14
HMGN1P4-201ENST00000419500 KLHDC4Q8TBB5 520 aa15.91■□□□□ 0.14
HMGN1P4-201ENST00000419500 GMLQ99445 158 aa15.91■□□□□ 0.14
HMGN1P4-201ENST00000419500 ZNF408Q9H9D4 720 aa15.91■□□□□ 0.14
HMGN1P4-201ENST00000419500 GGA3Q9NZ52 723 aa15.91■□□□□ 0.14
HMGN1P4-201ENST00000419500 RIPOR2Q9Y4F9 1068 aa15.91■□□□□ 0.14
HMGN1P4-201ENST00000419500 GNAI3P08754 354 aa15.9■□□□□ 0.14
HMGN1P4-201ENST00000419500 LRRC24Q50LG9 513 aa15.9■□□□□ 0.14
HMGN1P4-201ENST00000419500 KRT26Q7Z3Y9 468 aa15.9■□□□□ 0.14
HMGN1P4-201ENST00000419500 CLUAP1Q96AJ1 413 aa15.9■□□□□ 0.14
HMGN1P4-201ENST00000419500 MEIS3Q99687 375 aa15.9■□□□□ 0.14
HMGN1P4-201ENST00000419500 MXD3Q9BW11 206 aa15.9■□□□□ 0.14
HMGN1P4-201ENST00000419500 LRRFIP2Q9Y608 721 aaKnown RBP15.9■□□□□ 0.14
HMGN1P4-201ENST00000419500 CELF2O95319 508 aaKnown RBP15.89■□□□□ 0.13
HMGN1P4-201ENST00000419500 IL1R1P14778 569 aa15.89■□□□□ 0.13
HMGN1P4-201ENST00000419500 SULF1Q8IWU6 871 aa15.89■□□□□ 0.13
HMGN1P4-201ENST00000419500 HDAC9Q9UKV0 1011 aa15.89■□□□□ 0.13
HMGN1P4-201ENST00000419500 PDE8BO95263 885 aa15.88■□□□□ 0.13
HMGN1P4-201ENST00000419500 SCARF1Q14162 830 aa15.88■□□□□ 0.13
HMGN1P4-201ENST00000419500 PAXIP1Q6ZW49 1069 aaPredicted RBP15.88■□□□□ 0.13
HMGN1P4-201ENST00000419500 USP48Q86UV5 1035 aa15.88■□□□□ 0.13
HMGN1P4-201ENST00000419500 VPS37DQ86XT2 251 aa15.88■□□□□ 0.13
HMGN1P4-201ENST00000419500 KIAA0825Q8IV33 1275 aa15.88■□□□□ 0.13
HMGN1P4-201ENST00000419500 FTSJ3Q8IY81 847 aaKnown RBP15.88■□□□□ 0.13
HMGN1P4-201ENST00000419500 RASSF10A6NK89 507 aa15.87■□□□□ 0.13
HMGN1P4-201ENST00000419500 ADM5C9JUS6 153 aa15.87■□□□□ 0.13
HMGN1P4-201ENST00000419500 EYA2O00167 538 aa15.87■□□□□ 0.13
HMGN1P4-201ENST00000419500 HIBADHP31937 336 aaKnown RBP15.87■□□□□ 0.13
HMGN1P4-201ENST00000419500 GYG1P46976 350 aa15.87■□□□□ 0.13
HMGN1P4-201ENST00000419500 MMP14P50281 582 aa15.87■□□□□ 0.13
HMGN1P4-201ENST00000419500 PTPN12Q05209 780 aaKnown RBP15.87■□□□□ 0.13
HMGN1P4-201ENST00000419500 PUM3Q15397 648 aaKnown RBP15.87■□□□□ 0.13
HMGN1P4-201ENST00000419500 DEFB115Q30KQ5 88 aa15.87■□□□□ 0.13
HMGN1P4-201ENST00000419500 CAVIN4Q5BKX8 364 aa15.87■□□□□ 0.13
HMGN1P4-201ENST00000419500 ANGEL2Q5VTE6 544 aaKnown RBP15.87■□□□□ 0.13
HMGN1P4-201ENST00000419500 CST9Q5W186 159 aa15.87■□□□□ 0.13
HMGN1P4-201ENST00000419500 SIL1Q9H173 461 aa15.87■□□□□ 0.13
HMGN1P4-201ENST00000419500 TNNQ9UQP3 1299 aa15.87■□□□□ 0.13
HMGN1P4-201ENST00000419500 ZBTB22O15209 634 aa15.86■□□□□ 0.13
HMGN1P4-201ENST00000419500 FRAT2O75474 233 aaPredicted RBP15.86■□□□□ 0.13
HMGN1P4-201ENST00000419500 IFIT1P09914 478 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms