RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 INTS3Q68E01 1043 aaKnown RBP25.51■■□□□ 1.67
GTF3A-202ENST00000419181 C15orf52Q6ZUT6 534 aaKnown RBP25.51■■□□□ 1.67
GTF3A-202ENST00000419181 TRPM4Q8TD43 1214 aa25.51■■□□□ 1.67
GTF3A-202ENST00000419181 PUS3Q9BZE2 481 aaKnown RBP25.51■■□□□ 1.67
GTF3A-202ENST00000419181 USP17L3A6NCW0 530 aa25.5■■□□□ 1.67
GTF3A-202ENST00000419181 USP17L4A6NCW7 530 aa25.5■■□□□ 1.67
GTF3A-202ENST00000419181 UBTFL1P0CB47 393 aaPredicted RBP25.5■■□□□ 1.67
GTF3A-202ENST00000419181 HIRAP54198 1017 aaPredicted RBP25.5■■□□□ 1.67
GTF3A-202ENST00000419181 RSBN1LQ6PCB5 846 aaPredicted RBP25.5■■□□□ 1.67
GTF3A-202ENST00000419181 ATF7IPQ6VMQ6 1270 aa25.5■■□□□ 1.67
GTF3A-202ENST00000419181 USP17L1Q7RTZ2 530 aa25.5■■□□□ 1.67
GTF3A-202ENST00000419181 AGBL3Q8NEM8 1001 aa25.49■■□□□ 1.67
GTF3A-202ENST00000419181 FRAT1Q92837 279 aaPredicted RBP25.49■■□□□ 1.67
GTF3A-202ENST00000419181 RIPOR2Q9Y4F9 1068 aa25.49■■□□□ 1.67
GTF3A-202ENST00000419181 GMLQ99445 158 aa25.48■■□□□ 1.67
GTF3A-202ENST00000419181 CREBZFQ9NS37 354 aa25.48■■□□□ 1.67
GTF3A-202ENST00000419181 PGAP2Q9UHJ9 254 aa25.48■■□□□ 1.67
GTF3A-202ENST00000419181 SAMD7Q7Z3H4 446 aa25.47■■□□□ 1.67
GTF3A-202ENST00000419181 ZC3H15Q8WU90 426 aaKnown RBP25.47■■□□□ 1.67
GTF3A-202ENST00000419181 MEIS3Q99687 375 aa25.47■■□□□ 1.67
GTF3A-202ENST00000419181 TNNQ9UQP3 1299 aa25.47■■□□□ 1.67
GTF3A-202ENST00000419181 MROH5Q6ZUA9 1318 aa25.46■■□□□ 1.67
GTF3A-202ENST00000419181 PLIN1O60240 522 aa25.46■■□□□ 1.67
GTF3A-202ENST00000419181 EGFRP00533 1210 aa25.46■■□□□ 1.67
GTF3A-202ENST00000419181 DACT2Q5SW24 774 aa25.46■■□□□ 1.67
GTF3A-202ENST00000419181 STRIP1Q5VSL9 837 aa25.46■■□□□ 1.67
GTF3A-202ENST00000419181 RFX5P48382 616 aaPredicted RBP25.45■■□□□ 1.66
GTF3A-202ENST00000419181 TBC1D10BQ4KMP7 808 aaPredicted RBP25.45■■□□□ 1.66
GTF3A-202ENST00000419181 LRRC24Q50LG9 513 aa25.45■■□□□ 1.66
GTF3A-202ENST00000419181 ZKSCAN2Q63HK3 967 aa25.45■■□□□ 1.66
GTF3A-202ENST00000419181 KLHDC4Q8TBB5 520 aa25.45■■□□□ 1.66
GTF3A-202ENST00000419181 CD209Q9NNX6 404 aa25.45■■□□□ 1.66
GTF3A-202ENST00000419181 HDAC5Q9UQL6 1122 aa25.45■■□□□ 1.66
GTF3A-202ENST00000419181 LRRFIP2Q9Y608 721 aaKnown RBP25.45■■□□□ 1.66
GTF3A-202ENST00000419181 ZNF280AP59817 542 aaPredicted RBP25.44■■□□□ 1.66
GTF3A-202ENST00000419181 UBE4AQ14139 1066 aa25.44■■□□□ 1.66
GTF3A-202ENST00000419181 JMYQ8N9B5 988 aa25.44■■□□□ 1.66
GTF3A-202ENST00000419181 TRPM7Q96QT4 1865 aa25.43■■□□□ 1.66
GTF3A-202ENST00000419181 CLUAP1Q96AJ1 413 aa25.43■■□□□ 1.66
GTF3A-202ENST00000419181 MYO3BQ8WXR4 1341 aa25.42■■□□□ 1.66
GTF3A-202ENST00000419181 TMEM88BA6NKF7 163 aa25.42■■□□□ 1.66
GTF3A-202ENST00000419181 USP17L8P0C7I0 530 aa25.42■■□□□ 1.66
GTF3A-202ENST00000419181 KIF4BQ2VIQ3 1234 aa25.42■■□□□ 1.66
GTF3A-202ENST00000419181 ZNF804AQ7Z570 1209 aa25.42■■□□□ 1.66
GTF3A-202ENST00000419181 VGLL2Q8N8G2 317 aa25.42■■□□□ 1.66
GTF3A-202ENST00000419181 MXD3Q9BW11 206 aa25.42■■□□□ 1.66
GTF3A-202ENST00000419181 TRAF5O00463 557 aa25.41■■□□□ 1.66
GTF3A-202ENST00000419181 GNAI3P08754 354 aa25.41■■□□□ 1.66
GTF3A-202ENST00000419181 IL1R1P14778 569 aa25.41■■□□□ 1.66
GTF3A-202ENST00000419181 PTPN12Q05209 780 aaKnown RBP25.41■■□□□ 1.66
GTF3A-202ENST00000419181 FMR1Q06787 632 aaKnown RBP eCLIP25.41■■□□□ 1.66
GTF3A-202ENST00000419181 RBM26Q5T8P6 1007 aaKnown RBP25.41■■□□□ 1.66
GTF3A-202ENST00000419181 TTLL5Q6EMB2 1281 aa25.41■■□□□ 1.66
GTF3A-202ENST00000419181 FBXW7Q969H0 707 aa25.41■■□□□ 1.66
GTF3A-202ENST00000419181 GTF2IP78347 998 aa25.4■■□□□ 1.66
GTF3A-202ENST00000419181 METTL24Q5JXM2 366 aa25.4■■□□□ 1.66
GTF3A-202ENST00000419181 GLIS2Q9BZE0 524 aaPredicted RBP25.4■■□□□ 1.66
GTF3A-202ENST00000419181 MKRN1Q9UHC7 482 aaKnown RBP25.4■■□□□ 1.66
GTF3A-202ENST00000419181 POLR2AP24928 1970 aaKnown RBP25.39■■□□□ 1.66
GTF3A-202ENST00000419181 EYA2O00167 538 aa25.39■■□□□ 1.66
GTF3A-202ENST00000419181 PDE8BO95263 885 aa25.39■■□□□ 1.66
GTF3A-202ENST00000419181 CDC37L1Q7L3B6 337 aa25.38■■□□□ 1.65
GTF3A-202ENST00000419181 TMEM57Q8N5G2 664 aa25.38■■□□□ 1.65
GTF3A-202ENST00000419181 MYOZ2Q9NPC6 264 aa25.38■■□□□ 1.65
GTF3A-202ENST00000419181 FAM84BQ96KN1 310 aaPredicted RBP25.37■■□□□ 1.65
GTF3A-202ENST00000419181 FBXO3Q9UK99 471 aa25.37■■□□□ 1.65
GTF3A-202ENST00000419181 GYG1P46976 350 aa25.36■■□□□ 1.65
GTF3A-202ENST00000419181 ATG9AQ7Z3C6 839 aa25.36■■□□□ 1.65
GTF3A-202ENST00000419181 CNTNAP1P78357 1384 aa25.35■■□□□ 1.65
GTF3A-202ENST00000419181 PCNTO95613 3336 aa25.35■■□□□ 1.65
GTF3A-202ENST00000419181 CIAO1O76071 339 aa25.35■■□□□ 1.65
GTF3A-202ENST00000419181 HIBADHP31937 336 aaKnown RBP25.35■■□□□ 1.65
GTF3A-202ENST00000419181 MTX1Q13505 466 aa25.35■■□□□ 1.65
GTF3A-202ENST00000419181 CST9Q5W186 159 aa25.35■■□□□ 1.65
GTF3A-202ENST00000419181 OGFOD1Q8N543 542 aa25.35■■□□□ 1.65
GTF3A-202ENST00000419181 ASTN2O75129 1339 aaPredicted RBP25.35■■□□□ 1.65
GTF3A-202ENST00000419181 SASH1O94885 1247 aa25.34■■□□□ 1.65
GTF3A-202ENST00000419181 MMP14P50281 582 aa25.34■■□□□ 1.65
GTF3A-202ENST00000419181 CERS5Q8N5B7 392 aa25.34■■□□□ 1.65
GTF3A-202ENST00000419181 TDRD7Q8NHU6 1098 aaKnown RBP25.34■■□□□ 1.65
GTF3A-202ENST00000419181 DCPSQ96C86 337 aaKnown RBP25.34■■□□□ 1.65
GTF3A-202ENST00000419181 GGA3Q9NZ52 723 aa25.34■■□□□ 1.65
GTF3A-202ENST00000419181 GNAI2P04899 355 aa25.33■■□□□ 1.65
GTF3A-202ENST00000419181 FGFR2P21802 821 aa25.33■■□□□ 1.65
GTF3A-202ENST00000419181 SCARF1Q14162 830 aa25.33■■□□□ 1.65
GTF3A-202ENST00000419181 PUM3Q15397 648 aaKnown RBP25.33■■□□□ 1.65
GTF3A-202ENST00000419181 KRT26Q7Z3Y9 468 aa25.33■■□□□ 1.65
GTF3A-202ENST00000419181 FBXO33Q7Z6M2 555 aa25.33■■□□□ 1.65
GTF3A-202ENST00000419181 USP48Q86UV5 1035 aa25.33■■□□□ 1.65
GTF3A-202ENST00000419181 KIAA0825Q8IV33 1275 aa25.33■■□□□ 1.65
GTF3A-202ENST00000419181 FTSJ3Q8IY81 847 aaKnown RBP25.33■■□□□ 1.65
GTF3A-202ENST00000419181 DZIP1LQ8IYY4 767 aaKnown RBP25.33■■□□□ 1.65
GTF3A-202ENST00000419181 SIL1Q9H173 461 aa25.33■■□□□ 1.65
GTF3A-202ENST00000419181 COPRSQ9NQ92 184 aa25.33■■□□□ 1.65
GTF3A-202ENST00000419181 FAM205AQ6ZU69 1335 aa25.33■■□□□ 1.64
GTF3A-202ENST00000419181 ARAP2Q8WZ64 1704 aa25.32■■□□□ 1.64
GTF3A-202ENST00000419181 RLBP1P12271 317 aa25.32■■□□□ 1.64
GTF3A-202ENST00000419181 FKBP1AP62942 108 aaKnown RBP25.32■■□□□ 1.64
GTF3A-202ENST00000419181 ABT1Q9ULW3 272 aaKnown RBP25.32■■□□□ 1.64
GTF3A-202ENST00000419181 PA2G4Q9UQ80 394 aaKnown RBP25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms