RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 CNTROBQ8N137 903 aa25.95■■□□□ 1.74
PKNOX1-202ENST00000418336 COA1Q9GZY4 146 aa25.95■■□□□ 1.74
PKNOX1-202ENST00000418336 RSBN1LQ6PCB5 846 aaPredicted RBP25.94■■□□□ 1.74
PKNOX1-202ENST00000418336 ATF7IPQ6VMQ6 1270 aa25.94■■□□□ 1.74
PKNOX1-202ENST00000418336 MEIS3Q99687 375 aa25.94■■□□□ 1.74
PKNOX1-202ENST00000418336 LRRC24Q50LG9 513 aa25.93■■□□□ 1.74
PKNOX1-202ENST00000418336 DACT2Q5SW24 774 aa25.93■■□□□ 1.74
PKNOX1-202ENST00000418336 VGLL2Q8N8G2 317 aa25.93■■□□□ 1.74
PKNOX1-202ENST00000418336 KLHDC4Q8TBB5 520 aa25.93■■□□□ 1.74
PKNOX1-202ENST00000418336 CLEC11AQ9Y240 323 aa25.93■■□□□ 1.74
PKNOX1-202ENST00000418336 PCNTO95613 3336 aa25.93■■□□□ 1.74
PKNOX1-202ENST00000418336 FMR1Q06787 632 aaKnown RBP eCLIP25.92■■□□□ 1.74
PKNOX1-202ENST00000418336 SAMD7Q7Z3H4 446 aa25.92■■□□□ 1.74
PKNOX1-202ENST00000418336 USP17L3A6NCW0 530 aa25.91■■□□□ 1.74
PKNOX1-202ENST00000418336 USP17L4A6NCW7 530 aa25.91■■□□□ 1.74
PKNOX1-202ENST00000418336 ZNF280AP59817 542 aaPredicted RBP25.91■■□□□ 1.74
PKNOX1-202ENST00000418336 USP17L1Q7RTZ2 530 aa25.91■■□□□ 1.74
PKNOX1-202ENST00000418336 AGBL3Q8NEM8 1001 aa25.91■■□□□ 1.74
PKNOX1-202ENST00000418336 MXD3Q9BW11 206 aa25.91■■□□□ 1.74
PKNOX1-202ENST00000418336 CNNM1Q9NRU3 951 aa25.91■■□□□ 1.74
PKNOX1-202ENST00000418336 PTPN12Q05209 780 aaKnown RBP25.9■■□□□ 1.74
PKNOX1-202ENST00000418336 CD209Q9NNX6 404 aa25.9■■□□□ 1.74
PKNOX1-202ENST00000418336 CREBZFQ9NS37 354 aa25.9■■□□□ 1.74
PKNOX1-202ENST00000418336 UBTFL1P0CB47 393 aaPredicted RBP25.89■■□□□ 1.74
PKNOX1-202ENST00000418336 TAF7LQ5H9L4 462 aa25.89■■□□□ 1.74
PKNOX1-202ENST00000418336 STRIP1Q5VSL9 837 aa25.89■■□□□ 1.74
PKNOX1-202ENST00000418336 ZC3H15Q8WU90 426 aaKnown RBP25.89■■□□□ 1.74
PKNOX1-202ENST00000418336 KLRG1Q96E93 195 aa25.89■■□□□ 1.74
PKNOX1-202ENST00000418336 G3V3G9 751 aa25.88■■□□□ 1.73
PKNOX1-202ENST00000418336 H7C1D1 291 aa25.88■■□□□ 1.73
PKNOX1-202ENST00000418336 IPO8O15397 1037 aaKnown RBP25.88■■□□□ 1.73
PKNOX1-202ENST00000418336 IL1R1P14778 569 aa25.88■■□□□ 1.73
PKNOX1-202ENST00000418336 DCAF8Q5TAQ9 597 aa25.88■■□□□ 1.73
PKNOX1-202ENST00000418336 FRAT1Q92837 279 aaPredicted RBP25.88■■□□□ 1.73
PKNOX1-202ENST00000418336 LRRFIP2Q9Y608 721 aaKnown RBP25.88■■□□□ 1.73
PKNOX1-202ENST00000418336 MROH5Q6ZUA9 1318 aa25.88■■□□□ 1.73
PKNOX1-202ENST00000418336 TRAF5O00463 557 aa25.87■■□□□ 1.73
PKNOX1-202ENST00000418336 TBC1D10BQ4KMP7 808 aaPredicted RBP25.87■■□□□ 1.73
PKNOX1-202ENST00000418336 PLIN1O60240 522 aa25.86■■□□□ 1.73
PKNOX1-202ENST00000418336 KCNJ4P48050 445 aa25.86■■□□□ 1.73
PKNOX1-202ENST00000418336 UBE4AQ14139 1066 aa25.86■■□□□ 1.73
PKNOX1-202ENST00000418336 ATG9AQ7Z3C6 839 aa25.86■■□□□ 1.73
PKNOX1-202ENST00000418336 JMYQ8N9B5 988 aa25.86■■□□□ 1.73
PKNOX1-202ENST00000418336 TRPM7Q96QT4 1865 aa25.85■■□□□ 1.73
PKNOX1-202ENST00000418336 CST9Q5W186 159 aa25.85■■□□□ 1.73
PKNOX1-202ENST00000418336 ZKSCAN2Q63HK3 967 aa25.85■■□□□ 1.73
PKNOX1-202ENST00000418336 CERS5Q8N5B7 392 aa25.85■■□□□ 1.73
PKNOX1-202ENST00000418336 TMEM57Q8N5G2 664 aa25.85■■□□□ 1.73
PKNOX1-202ENST00000418336 CLUAP1Q96AJ1 413 aa25.85■■□□□ 1.73
PKNOX1-202ENST00000418336 FAM84BQ96KN1 310 aaPredicted RBP25.85■■□□□ 1.73
PKNOX1-202ENST00000418336 ASTN2O75129 1339 aaPredicted RBP25.85■■□□□ 1.73
PKNOX1-202ENST00000418336 RLBP1P12271 317 aa25.84■■□□□ 1.73
PKNOX1-202ENST00000418336 FGFR2P21802 821 aa25.84■■□□□ 1.73
PKNOX1-202ENST00000418336 KIF4BQ2VIQ3 1234 aa25.84■■□□□ 1.73
PKNOX1-202ENST00000418336 GLIS2Q9BZE0 524 aaPredicted RBP25.84■■□□□ 1.73
PKNOX1-202ENST00000418336 POLR2AP24928 1970 aaKnown RBP25.84■■□□□ 1.73
PKNOX1-202ENST00000418336 TMEM88BA6NKF7 163 aa25.83■■□□□ 1.73
PKNOX1-202ENST00000418336 EYA2O00167 538 aa25.83■■□□□ 1.73
PKNOX1-202ENST00000418336 MTX1Q13505 466 aa25.83■■□□□ 1.73
PKNOX1-202ENST00000418336 DLK2Q6UY11 383 aa25.83■■□□□ 1.73
PKNOX1-202ENST00000418336 PDE8BO95263 885 aa25.82■■□□□ 1.72
PKNOX1-202ENST00000418336 USP17L8P0C7I0 530 aa25.82■■□□□ 1.72
PKNOX1-202ENST00000418336 GTF2IP78347 998 aa25.82■■□□□ 1.72
PKNOX1-202ENST00000418336 TTLL5Q6EMB2 1281 aa25.82■■□□□ 1.72
PKNOX1-202ENST00000418336 GNAI3P08754 354 aa25.81■■□□□ 1.72
PKNOX1-202ENST00000418336 GYG1P46976 350 aa25.81■■□□□ 1.72
PKNOX1-202ENST00000418336 TDRD7Q8NHU6 1098 aaKnown RBP25.81■■□□□ 1.72
PKNOX1-202ENST00000418336 MYOZ2Q9NPC6 264 aa25.81■■□□□ 1.72
PKNOX1-202ENST00000418336 CNTNAP1P78357 1384 aa25.81■■□□□ 1.72
PKNOX1-202ENST00000418336 METTL24Q5JXM2 366 aa25.8■■□□□ 1.72
PKNOX1-202ENST00000418336 RBM26Q5T8P6 1007 aaKnown RBP25.8■■□□□ 1.72
PKNOX1-202ENST00000418336 ZNF804AQ7Z570 1209 aa25.8■■□□□ 1.72
PKNOX1-202ENST00000418336 FBXO33Q7Z6M2 555 aa25.8■■□□□ 1.72
PKNOX1-202ENST00000418336 COPRSQ9NQ92 184 aa25.8■■□□□ 1.72
PKNOX1-202ENST00000418336 MYO3BQ8WXR4 1341 aa25.8■■□□□ 1.72
PKNOX1-202ENST00000418336 CIAO1O76071 339 aa25.79■■□□□ 1.72
PKNOX1-202ENST00000418336 ZBED3Q96IU2 234 aaPredicted RBP25.79■■□□□ 1.72
PKNOX1-202ENST00000418336 PA2G4Q9UQ80 394 aaKnown RBP25.79■■□□□ 1.72
PKNOX1-202ENST00000418336 FAM205AQ6ZU69 1335 aa25.79■■□□□ 1.72
PKNOX1-202ENST00000418336 ARAP2Q8WZ64 1704 aa25.78■■□□□ 1.72
PKNOX1-202ENST00000418336 CDC37L1Q7L3B6 337 aa25.78■■□□□ 1.72
PKNOX1-202ENST00000418336 FBXO3Q9UK99 471 aa25.78■■□□□ 1.72
PKNOX1-202ENST00000418336 SASH1O94885 1247 aa25.77■■□□□ 1.72
PKNOX1-202ENST00000418336 FKBP1AP62942 108 aaKnown RBP25.77■■□□□ 1.72
PKNOX1-202ENST00000418336 RASSF10A6NK89 507 aa25.76■■□□□ 1.71
PKNOX1-202ENST00000418336 HIBADHP31937 336 aaKnown RBP25.76■■□□□ 1.71
PKNOX1-202ENST00000418336 SCARF1Q14162 830 aa25.76■■□□□ 1.71
PKNOX1-202ENST00000418336 USP48Q86UV5 1035 aa25.76■■□□□ 1.71
PKNOX1-202ENST00000418336 DZIP1LQ8IYY4 767 aaKnown RBP25.76■■□□□ 1.71
PKNOX1-202ENST00000418336 FBXW7Q969H0 707 aa25.76■■□□□ 1.71
PKNOX1-202ENST00000418336 GGA3Q9NZ52 723 aa25.76■■□□□ 1.71
PKNOX1-202ENST00000418336 MKRN1Q9UHC7 482 aaKnown RBP25.76■■□□□ 1.71
PKNOX1-202ENST00000418336 HDAC5Q9UQL6 1122 aa25.76■■□□□ 1.71
PKNOX1-202ENST00000418336 ADM5C9JUS6 153 aa25.75■■□□□ 1.71
PKNOX1-202ENST00000418336 ZBTB7BO15156 539 aaPredicted RBP25.75■■□□□ 1.71
PKNOX1-202ENST00000418336 NBPF9Q3BBW0 867 aa25.75■■□□□ 1.71
PKNOX1-202ENST00000418336 SIL1Q9H173 461 aa25.75■■□□□ 1.71
PKNOX1-202ENST00000418336 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.75■■□□□ 1.71
PKNOX1-202ENST00000418336 WNT10BO00744 389 aa25.74■■□□□ 1.71
PKNOX1-202ENST00000418336 PUM3Q15397 648 aaKnown RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms