RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 U3KPZ7 1027 aaPredicted RBP9.15□□□□□ -0.94
VRK2-203ENST00000417641 SLIT1O75093 1534 aa9.15□□□□□ -0.94
VRK2-203ENST00000417641 ZNF609O15014 1411 aa9.15□□□□□ -0.94
VRK2-203ENST00000417641 USP54Q70EL1 1684 aa9.15□□□□□ -0.94
VRK2-203ENST00000417641 DIP2BQ9P265 1576 aa9.15□□□□□ -0.94
VRK2-203ENST00000417641 EFCAB8A8MWE9 144 aa9.15□□□□□ -0.95
VRK2-203ENST00000417641 NLRP12P59046 1061 aa9.15□□□□□ -0.95
VRK2-203ENST00000417641 ST5P78524 1137 aa9.15□□□□□ -0.95
VRK2-203ENST00000417641 PSME1Q06323 249 aa9.15□□□□□ -0.95
VRK2-203ENST00000417641 G3BP1Q13283 466 aaKnown RBP eCLIP9.15□□□□□ -0.95
VRK2-203ENST00000417641 TXLNBQ8N3L3 684 aa9.15□□□□□ -0.95
VRK2-203ENST00000417641 NEK11Q8NG66 645 aa9.15□□□□□ -0.95
VRK2-203ENST00000417641 MRPS27Q92552 414 aaKnown RBP9.15□□□□□ -0.95
VRK2-203ENST00000417641 UBXN4Q92575 508 aa9.15□□□□□ -0.95
VRK2-203ENST00000417641 EDC3Q96F86 508 aaKnown RBP9.15□□□□□ -0.95
VRK2-203ENST00000417641 C9orf78Q9NZ63 289 aaPredicted RBP9.15□□□□□ -0.95
VRK2-203ENST00000417641 HDAC5Q9UQL6 1122 aa9.15□□□□□ -0.95
VRK2-203ENST00000417641 SEC31AO94979 1220 aaKnown RBP9.14□□□□□ -0.95
VRK2-203ENST00000417641 ATP5JP18859 108 aa9.14□□□□□ -0.95
VRK2-203ENST00000417641 NDUFA8P51970 172 aa9.14□□□□□ -0.95
VRK2-203ENST00000417641 PROSER3Q2NL68 480 aa9.14□□□□□ -0.95
VRK2-203ENST00000417641 CWF19L2Q2TBE0 894 aaKnown RBP9.14□□□□□ -0.95
VRK2-203ENST00000417641 CC2D1AQ6P1N0 951 aaPredicted RBP9.14□□□□□ -0.95
VRK2-203ENST00000417641 TMEM139Q8IV31 216 aa9.14□□□□□ -0.95
VRK2-203ENST00000417641 BICC1Q9H694 974 aaKnown RBP9.14□□□□□ -0.95
VRK2-203ENST00000417641 ARGLU1Q9NWB6 273 aaPredicted RBP9.14□□□□□ -0.95
VRK2-203ENST00000417641 DBF4Q9UBU7 674 aaPredicted RBP9.14□□□□□ -0.95
VRK2-203ENST00000417641 DNAI1Q9UI46 699 aa9.14□□□□□ -0.95
VRK2-203ENST00000417641 TMEM2Q9UHN6 1383 aa9.14□□□□□ -0.95
VRK2-203ENST00000417641 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.14□□□□□ -0.95
VRK2-203ENST00000417641 GRM8O00222 908 aa9.14□□□□□ -0.95
VRK2-203ENST00000417641 TPM1P09493 284 aa9.14□□□□□ -0.95
VRK2-203ENST00000417641 FDPSP14324 419 aaKnown RBP9.14□□□□□ -0.95
VRK2-203ENST00000417641 LRRFIP1Q32MZ4 808 aaKnown RBP9.14□□□□□ -0.95
VRK2-203ENST00000417641 RSRC2Q7L4I2 434 aaKnown RBP9.14□□□□□ -0.95
VRK2-203ENST00000417641 FCHSD1Q86WN1 690 aa9.14□□□□□ -0.95
VRK2-203ENST00000417641 LINC00301Q8NCQ3 95 aa9.14□□□□□ -0.95
VRK2-203ENST00000417641 CARD6Q9BX69 1037 aa9.14□□□□□ -0.95
VRK2-203ENST00000417641 ATG3Q9NT62 314 aa9.14□□□□□ -0.95
VRK2-203ENST00000417641 PSD3Q9NYI0 1048 aa9.14□□□□□ -0.95
VRK2-203ENST00000417641 A0A1B0GVL5 298 aa9.13□□□□□ -0.95
VRK2-203ENST00000417641 IKBKBO14920 756 aa9.13□□□□□ -0.95
VRK2-203ENST00000417641 CCP110O43303 1012 aa9.13□□□□□ -0.95
VRK2-203ENST00000417641 SMC2O95347 1197 aa9.13□□□□□ -0.95
VRK2-203ENST00000417641 CHGBP05060 677 aa9.13□□□□□ -0.95
VRK2-203ENST00000417641 HSP90B1P14625 803 aaKnown RBP9.13□□□□□ -0.95
VRK2-203ENST00000417641 ME1P48163 572 aa9.13□□□□□ -0.95
VRK2-203ENST00000417641 HDGFP51858 240 aaKnown RBP9.13□□□□□ -0.95
VRK2-203ENST00000417641 FANCCQ00597 558 aa9.13□□□□□ -0.95
VRK2-203ENST00000417641 TEX35Q5T0J7 233 aa9.13□□□□□ -0.95
VRK2-203ENST00000417641 DHX32Q7L7V1 743 aaKnown RBP9.13□□□□□ -0.95
VRK2-203ENST00000417641 LINS1Q8NG48 757 aa9.13□□□□□ -0.95
VRK2-203ENST00000417641 SEC62Q99442 399 aaKnown RBP9.13□□□□□ -0.95
VRK2-203ENST00000417641 LRRC2Q9BYS8 371 aa9.13□□□□□ -0.95
VRK2-203ENST00000417641 TSPOAP1O95153 1857 aa9.13□□□□□ -0.95
VRK2-203ENST00000417641 VWA3AA6NCI4 1184 aa9.13□□□□□ -0.95
VRK2-203ENST00000417641 OAS2P29728 719 aaKnown RBP9.13□□□□□ -0.95
VRK2-203ENST00000417641 MAP3K9P80192 1104 aa9.13□□□□□ -0.95
VRK2-203ENST00000417641 CCDC129Q6ZRS4 1044 aa9.13□□□□□ -0.95
VRK2-203ENST00000417641 IQUBQ8NA54 791 aa9.13□□□□□ -0.95
VRK2-203ENST00000417641 DPF2Q92785 391 aa9.13□□□□□ -0.95
VRK2-203ENST00000417641 TRIM34Q9BYJ4 488 aa9.13□□□□□ -0.95
VRK2-203ENST00000417641 ZCCHC17Q9NP64 241 aaKnown RBP9.13□□□□□ -0.95
VRK2-203ENST00000417641 POLR3GO15318 223 aaPredicted RBP9.12□□□□□ -0.95
VRK2-203ENST00000417641 YEATS4O95619 227 aa9.12□□□□□ -0.95
VRK2-203ENST00000417641 HMGB1P09429 215 aaKnown RBP9.12□□□□□ -0.95
VRK2-203ENST00000417641 RFX5P48382 616 aaPredicted RBP9.12□□□□□ -0.95
VRK2-203ENST00000417641 EVCP57679 992 aa9.12□□□□□ -0.95
VRK2-203ENST00000417641 APOBRQ0VD83 1088 aa9.12□□□□□ -0.95
VRK2-203ENST00000417641 TRERF1Q96PN7 1200 aa9.12□□□□□ -0.95
VRK2-203ENST00000417641 FUT8Q9BYC5 575 aa9.12□□□□□ -0.95
VRK2-203ENST00000417641 EPC1Q9H2F5 836 aa9.12□□□□□ -0.95
VRK2-203ENST00000417641 TUBE1Q9UJT0 475 aa9.12□□□□□ -0.95
VRK2-203ENST00000417641 DBNLQ9UJU6 430 aaKnown RBP9.12□□□□□ -0.95
VRK2-203ENST00000417641 PDIA3P30101 505 aaKnown RBP9.12□□□□□ -0.95
VRK2-203ENST00000417641 SMC1AQ14683 1233 aaKnown RBP9.12□□□□□ -0.95
VRK2-203ENST00000417641 MCMDC2Q4G0Z9 681 aa9.12□□□□□ -0.95
VRK2-203ENST00000417641 AXDND1Q5T1B0 1012 aaPredicted RBP9.12□□□□□ -0.95
VRK2-203ENST00000417641 GORABQ5T7V8 394 aa9.12□□□□□ -0.95
VRK2-203ENST00000417641 KRBA2Q6ZNG9 492 aa9.12□□□□□ -0.95
VRK2-203ENST00000417641 FBXL16Q8N461 479 aa9.12□□□□□ -0.95
VRK2-203ENST00000417641 GPR161Q8N6U8 529 aaKnown RBP9.12□□□□□ -0.95
VRK2-203ENST00000417641 USHBP1Q8N6Y0 703 aa9.12□□□□□ -0.95
VRK2-203ENST00000417641 FBXW7Q969H0 707 aa9.12□□□□□ -0.95
VRK2-203ENST00000417641 ZNF274Q96GC6 653 aaPredicted RBP9.12□□□□□ -0.95
VRK2-203ENST00000417641 SDF4Q9BRK5 362 aa9.12□□□□□ -0.95
VRK2-203ENST00000417641 POLR3EQ9NVU0 708 aa9.12□□□□□ -0.95
VRK2-203ENST00000417641 CLIC4Q9Y696 253 aa9.12□□□□□ -0.95
VRK2-203ENST00000417641 PLEKHG1Q9ULL1 1385 aa9.11□□□□□ -0.95
VRK2-203ENST00000417641 MAP2K7O14733 419 aa9.11□□□□□ -0.95
VRK2-203ENST00000417641 URI1O94763 535 aaPredicted RBP9.11□□□□□ -0.95
VRK2-203ENST00000417641 IGKV5-2P06315 115 aa9.11□□□□□ -0.95
VRK2-203ENST00000417641 ATP1A3P13637 1013 aa9.11□□□□□ -0.95
VRK2-203ENST00000417641 FOSBP53539 338 aa9.11□□□□□ -0.95
VRK2-203ENST00000417641 NLRP6P59044 892 aa9.11□□□□□ -0.95
VRK2-203ENST00000417641 TBX2Q13207 712 aaPredicted RBP9.11□□□□□ -0.95
VRK2-203ENST00000417641 HOMER1Q86YM7 354 aa9.11□□□□□ -0.95
VRK2-203ENST00000417641 VSTM4Q8IW00 320 aa9.11□□□□□ -0.95
VRK2-203ENST00000417641 MNS1Q8NEH6 495 aa9.11□□□□□ -0.95
VRK2-203ENST00000417641 KLHDC4Q8TBB5 520 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms