RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-231ENST00000417521 CNNM1Q9NRU3 951 aa20.59■□□□□ 0.89
DDR1-231ENST00000417521 KIF16BQ96L93 1317 aa20.59■□□□□ 0.89
DDR1-231ENST00000417521 SAMD7Q7Z3H4 446 aa20.58■□□□□ 0.89
DDR1-231ENST00000417521 TNS4Q8IZW8 715 aa20.58■□□□□ 0.89
DDR1-231ENST00000417521 HELBQ8NG08 1087 aaPredicted RBP20.58■□□□□ 0.89
DDR1-231ENST00000417521 ZNF609O15014 1411 aa20.58■□□□□ 0.89
DDR1-231ENST00000417521 TAF5LO75529 589 aa20.57■□□□□ 0.88
DDR1-231ENST00000417521 ANKRD44Q8N8A2 993 aa20.57■□□□□ 0.88
DDR1-231ENST00000417521 GMLQ99445 158 aa20.57■□□□□ 0.88
DDR1-231ENST00000417521 KLRK1P26718 216 aa20.56■□□□□ 0.88
DDR1-231ENST00000417521 TBC1D10BQ4KMP7 808 aaPredicted RBP20.56■□□□□ 0.88
DDR1-231ENST00000417521 STRIP1Q5VSL9 837 aa20.56■□□□□ 0.88
DDR1-231ENST00000417521 MYH3P11055 1940 aa20.56■□□□□ 0.88
DDR1-231ENST00000417521 SNAP23O00161 211 aa20.56■□□□□ 0.88
DDR1-231ENST00000417521 ZNF280AP59817 542 aaPredicted RBP20.56■□□□□ 0.88
DDR1-231ENST00000417521 CDC37L1Q7L3B6 337 aa20.56■□□□□ 0.88
DDR1-231ENST00000417521 IRS2Q9Y4H2 1338 aa20.55■□□□□ 0.88
DDR1-231ENST00000417521 IPO8O15397 1037 aaKnown RBP20.55■□□□□ 0.88
DDR1-231ENST00000417521 EGFRP00533 1210 aa20.55■□□□□ 0.88
DDR1-231ENST00000417521 DACT2Q5SW24 774 aa20.55■□□□□ 0.88
DDR1-231ENST00000417521 RIPOR2Q9Y4F9 1068 aa20.55■□□□□ 0.88
DDR1-231ENST00000417521 TRAF5O00463 557 aa20.54■□□□□ 0.88
DDR1-231ENST00000417521 USP17L8P0C7I0 530 aa20.54■□□□□ 0.88
DDR1-231ENST00000417521 KIF4BQ2VIQ3 1234 aa20.54■□□□□ 0.88
DDR1-231ENST00000417521 RBM26Q5T8P6 1007 aaKnown RBP20.54■□□□□ 0.88
DDR1-231ENST00000417521 GLIS2Q9BZE0 524 aaPredicted RBP20.54■□□□□ 0.88
DDR1-231ENST00000417521 PUS3Q9BZE2 481 aaKnown RBP20.54■□□□□ 0.88
DDR1-231ENST00000417521 CD209Q9NNX6 404 aa20.54■□□□□ 0.88
DDR1-231ENST00000417521 MKRN1Q9UHC7 482 aaKnown RBP20.54■□□□□ 0.88
DDR1-231ENST00000417521 HDAC5Q9UQL6 1122 aa20.54■□□□□ 0.88
DDR1-231ENST00000417521 MYO3BQ8WXR4 1341 aa20.54■□□□□ 0.88
DDR1-231ENST00000417521 PLIN1O60240 522 aa20.53■□□□□ 0.88
DDR1-231ENST00000417521 UBTFL1P0CB47 393 aaPredicted RBP20.53■□□□□ 0.88
DDR1-231ENST00000417521 FMR1Q06787 632 aaKnown RBP eCLIP20.53■□□□□ 0.88
DDR1-231ENST00000417521 UBE4AQ14139 1066 aa20.53■□□□□ 0.88
DDR1-231ENST00000417521 TTLL5Q6EMB2 1281 aa20.53■□□□□ 0.88
DDR1-231ENST00000417521 CNTNAP1P78357 1384 aa20.53■□□□□ 0.88
DDR1-231ENST00000417521 MMP14P50281 582 aa20.52■□□□□ 0.88
DDR1-231ENST00000417521 CST9Q5W186 159 aa20.52■□□□□ 0.88
DDR1-231ENST00000417521 ZNF804AQ7Z570 1209 aa20.52■□□□□ 0.88
DDR1-231ENST00000417521 MROH5Q6ZUA9 1318 aa20.52■□□□□ 0.88
DDR1-231ENST00000417521 RASSF10A6NK89 507 aa20.51■□□□□ 0.87
DDR1-231ENST00000417521 INTS3Q68E01 1043 aaKnown RBP20.51■□□□□ 0.87
DDR1-231ENST00000417521 DCPSQ96C86 337 aaKnown RBP20.51■□□□□ 0.87
DDR1-231ENST00000417521 BCAR3O75815 825 aa20.5■□□□□ 0.87
DDR1-231ENST00000417521 IL1R1P14778 569 aa20.5■□□□□ 0.87
DDR1-231ENST00000417521 GTF2IP78347 998 aa20.5■□□□□ 0.87
DDR1-231ENST00000417521 DEFB115Q30KQ5 88 aa20.5■□□□□ 0.87
DDR1-231ENST00000417521 OGFOD1Q8N543 542 aa20.5■□□□□ 0.87
DDR1-231ENST00000417521 FBXW7Q969H0 707 aa20.5■□□□□ 0.87
DDR1-231ENST00000417521 MYOZ2Q9NPC6 264 aa20.5■□□□□ 0.87
DDR1-231ENST00000417521 LRRC24Q50LG9 513 aa20.5■□□□□ 0.87
DDR1-231ENST00000417521 USP48Q86UV5 1035 aa20.5■□□□□ 0.87
DDR1-231ENST00000417521 MXD3Q9BW11 206 aa20.5■□□□□ 0.87
DDR1-231ENST00000417521 ABT1Q9ULW3 272 aaKnown RBP20.5■□□□□ 0.87
DDR1-231ENST00000417521 CELF2O95319 508 aaKnown RBP20.49■□□□□ 0.87
DDR1-231ENST00000417521 ATF7IPQ6VMQ6 1270 aa20.49■□□□□ 0.87
DDR1-231ENST00000417521 KRT26Q7Z3Y9 468 aa20.49■□□□□ 0.87
DDR1-231ENST00000417521 TRIM27P14373 513 aa20.48■□□□□ 0.87
DDR1-231ENST00000417521 RFX5P48382 616 aaPredicted RBP20.48■□□□□ 0.87
DDR1-231ENST00000417521 SCARF1Q14162 830 aa20.48■□□□□ 0.87
DDR1-231ENST00000417521 METTL24Q5JXM2 366 aa20.48■□□□□ 0.87
DDR1-231ENST00000417521 KLHDC4Q8TBB5 520 aa20.48■□□□□ 0.87
DDR1-231ENST00000417521 FRAT1Q92837 279 aaPredicted RBP20.48■□□□□ 0.87
DDR1-231ENST00000417521 SCN9AQ15858 1988 aa20.47■□□□□ 0.87
DDR1-231ENST00000417521 PDE8BO95263 885 aa20.47■□□□□ 0.87
DDR1-231ENST00000417521 VEGFBP49765 207 aa20.47■□□□□ 0.87
DDR1-231ENST00000417521 PTPN12Q05209 780 aaKnown RBP20.47■□□□□ 0.87
DDR1-231ENST00000417521 FAM84BQ96KN1 310 aaPredicted RBP20.47■□□□□ 0.87
DDR1-231ENST00000417521 MEIS3Q99687 375 aa20.47■□□□□ 0.87
DDR1-231ENST00000417521 GGA3Q9NZ52 723 aa20.47■□□□□ 0.87
DDR1-231ENST00000417521 TLL2Q9Y6L7 1015 aa20.47■□□□□ 0.87
DDR1-231ENST00000417521 EYA2O00167 538 aa20.46■□□□□ 0.87
DDR1-231ENST00000417521 SASH1O94885 1247 aa20.46■□□□□ 0.87
DDR1-231ENST00000417521 GNAI3P08754 354 aa20.46■□□□□ 0.87
DDR1-231ENST00000417521 HIBADHP31937 336 aaKnown RBP20.46■□□□□ 0.87
DDR1-231ENST00000417521 FKBP1AP62942 108 aaKnown RBP20.46■□□□□ 0.87
DDR1-231ENST00000417521 SULF1Q8IWU6 871 aa20.46■□□□□ 0.87
DDR1-231ENST00000417521 VGLL2Q8N8G2 317 aa20.46■□□□□ 0.87
DDR1-231ENST00000417521 FBXO3Q9UK99 471 aa20.46■□□□□ 0.87
DDR1-231ENST00000417521 HDAC9Q9UKV0 1011 aa20.46■□□□□ 0.87
DDR1-231ENST00000417521 ZKSCAN2Q63HK3 967 aa20.45■□□□□ 0.86
DDR1-231ENST00000417521 SAPCD2Q86UD0 394 aa20.45■□□□□ 0.86
DDR1-231ENST00000417521 LRRFIP2Q9Y608 721 aaKnown RBP20.45■□□□□ 0.86
DDR1-231ENST00000417521 ASTN2O75129 1339 aaPredicted RBP20.45■□□□□ 0.86
DDR1-231ENST00000417521 PITPNM2Q9BZ72 1349 aa20.45■□□□□ 0.86
DDR1-231ENST00000417521 ANGEL2Q5VTE6 544 aaKnown RBP20.44■□□□□ 0.86
DDR1-231ENST00000417521 KIAA0825Q8IV33 1275 aa20.44■□□□□ 0.86
DDR1-231ENST00000417521 TDRD7Q8NHU6 1098 aaKnown RBP20.44■□□□□ 0.86
DDR1-231ENST00000417521 ZNF408Q9H9D4 720 aa20.44■□□□□ 0.86
DDR1-231ENST00000417521 PCDH10Q9P2E7 1040 aa20.44■□□□□ 0.86
DDR1-231ENST00000417521 SPEF2Q9C093 1822 aa20.44■□□□□ 0.86
DDR1-231ENST00000417521 GYG1P46976 350 aa20.43■□□□□ 0.86
DDR1-231ENST00000417521 HHIPL1Q96JK4 782 aa20.43■□□□□ 0.86
DDR1-231ENST00000417521 FAM205AQ6ZU69 1335 aa20.43■□□□□ 0.86
DDR1-231ENST00000417521 ADM5C9JUS6 153 aa20.43■□□□□ 0.86
DDR1-231ENST00000417521 WNT10BO00744 389 aa20.43■□□□□ 0.86
DDR1-231ENST00000417521 NBPF9Q3BBW0 867 aa20.43■□□□□ 0.86
DDR1-231ENST00000417521 DLK2Q6UY11 383 aa20.43■□□□□ 0.86
DDR1-231ENST00000417521 FBXO33Q7Z6M2 555 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms