RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 HUNKP57058 714 aa9.41□□□□□ -0.9
CASP4-202ENST00000417440 WDR43Q15061 677 aaKnown RBP eCLIP9.41□□□□□ -0.9
CASP4-202ENST00000417440 ANKRD13DQ6ZTN6 518 aa9.41□□□□□ -0.9
CASP4-202ENST00000417440 PLBD2Q8NHP8 589 aa9.41□□□□□ -0.9
CASP4-202ENST00000417440 ZC3H15Q8WU90 426 aaKnown RBP9.41□□□□□ -0.9
CASP4-202ENST00000417440 ZIC5Q96T25 663 aa9.41□□□□□ -0.9
CASP4-202ENST00000417440 KCNQ5Q9NR82 932 aa9.41□□□□□ -0.9
CASP4-202ENST00000417440 PGAP2Q9UHJ9 254 aa9.41□□□□□ -0.9
CASP4-202ENST00000417440 DLG5Q8TDM6 1919 aa9.41□□□□□ -0.9
CASP4-202ENST00000417440 SPDYE16A6NNV3 312 aaPredicted RBP9.4□□□□□ -0.9
CASP4-202ENST00000417440 ADM5C9JUS6 153 aa9.4□□□□□ -0.9
CASP4-202ENST00000417440 POTEB2H3BUK9 544 aa9.4□□□□□ -0.9
CASP4-202ENST00000417440 IRS4O14654 1257 aaPredicted RBP9.4□□□□□ -0.9
CASP4-202ENST00000417440 SEMA3EO15041 775 aa9.4□□□□□ -0.9
CASP4-202ENST00000417440 BRPF1P55201 1214 aaPredicted RBP9.4□□□□□ -0.9
CASP4-202ENST00000417440 MLLT1Q03111 559 aaPredicted RBP9.4□□□□□ -0.9
CASP4-202ENST00000417440 DDX10Q13206 875 aaKnown RBP9.4□□□□□ -0.9
CASP4-202ENST00000417440 DGKZQ13574 1117 aa9.4□□□□□ -0.9
CASP4-202ENST00000417440 RALBP1Q15311 655 aa9.4□□□□□ -0.9
CASP4-202ENST00000417440 KRT26Q7Z3Y9 468 aa9.4□□□□□ -0.9
CASP4-202ENST00000417440 TMC4Q7Z404 712 aa9.4□□□□□ -0.9
CASP4-202ENST00000417440 RIC3Q7Z5B4 369 aa9.4□□□□□ -0.9
CASP4-202ENST00000417440 JARID2Q92833 1246 aaPredicted RBP9.4□□□□□ -0.9
CASP4-202ENST00000417440 DCPSQ96C86 337 aaKnown RBP9.4□□□□□ -0.9
CASP4-202ENST00000417440 CCDC85AQ96PX6 553 aaPredicted RBP9.4□□□□□ -0.9
CASP4-202ENST00000417440 MCOLN1Q9GZU1 580 aa9.4□□□□□ -0.9
CASP4-202ENST00000417440 POLLQ9UGP5 575 aa9.4□□□□□ -0.9
CASP4-202ENST00000417440 CDHR2Q9BYE9 1310 aa9.39□□□□□ -0.91
CASP4-202ENST00000417440 ELL2O00472 640 aaPredicted RBP9.39□□□□□ -0.91
CASP4-202ENST00000417440 DPYSL4O14531 572 aa9.39□□□□□ -0.91
CASP4-202ENST00000417440 CA12O43570 354 aa9.39□□□□□ -0.91
CASP4-202ENST00000417440 ECE2O60344 883 aa9.39□□□□□ -0.91
CASP4-202ENST00000417440 DUSP27Q5VZP5 1158 aa9.39□□□□□ -0.91
CASP4-202ENST00000417440 C2orf69Q8N8R5 385 aa9.39□□□□□ -0.91
CASP4-202ENST00000417440 OXER1Q8TDS5 423 aa9.39□□□□□ -0.91
CASP4-202ENST00000417440 RUNDC1Q96C34 613 aa9.39□□□□□ -0.91
CASP4-202ENST00000417440 HHIPL1Q96JK4 782 aa9.39□□□□□ -0.91
CASP4-202ENST00000417440 EYA3Q99504 573 aa9.39□□□□□ -0.91
CASP4-202ENST00000417440 ISCA1Q9BUE6 129 aa9.39□□□□□ -0.91
CASP4-202ENST00000417440 ZC3H12CQ9C0D7 883 aaKnown RBP9.39□□□□□ -0.91
CASP4-202ENST00000417440 DBF4Q9UBU7 674 aaPredicted RBP9.39□□□□□ -0.91
CASP4-202ENST00000417440 UFL1O94874 794 aa9.38□□□□□ -0.91
CASP4-202ENST00000417440 ZNF157P51786 506 aaPredicted RBP9.38□□□□□ -0.91
CASP4-202ENST00000417440 RPS8P62241 208 aaKnown RBP9.38□□□□□ -0.91
CASP4-202ENST00000417440 NOGQ13253 232 aa9.38□□□□□ -0.91
CASP4-202ENST00000417440 SF3B3Q15393 1217 aaKnown RBP9.38□□□□□ -0.91
CASP4-202ENST00000417440 KIF4BQ2VIQ3 1234 aa9.38□□□□□ -0.91
CASP4-202ENST00000417440 RGMBQ6NW40 437 aa9.38□□□□□ -0.91
CASP4-202ENST00000417440 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.38□□□□□ -0.91
CASP4-202ENST00000417440 TBC1D16Q8TBP0 767 aa9.38□□□□□ -0.91
CASP4-202ENST00000417440 DPF2Q92785 391 aa9.38□□□□□ -0.91
CASP4-202ENST00000417440 MYD88Q99836 296 aa9.38□□□□□ -0.91
CASP4-202ENST00000417440 GBA2Q9HCG7 927 aaPredicted RBP9.38□□□□□ -0.91
CASP4-202ENST00000417440 SEC31BQ9NQW1 1179 aa9.38□□□□□ -0.91
CASP4-202ENST00000417440 HYPKQ9NX55 129 aa9.38□□□□□ -0.91
CASP4-202ENST00000417440 ANKIB1Q9P2G1 1089 aa9.38□□□□□ -0.91
CASP4-202ENST00000417440 ADAMTS8Q9UP79 889 aa9.38□□□□□ -0.91
CASP4-202ENST00000417440 ASTN2O75129 1339 aaPredicted RBP9.37□□□□□ -0.91
CASP4-202ENST00000417440 MYBBP1AQ9BQG0 1328 aaKnown RBP9.37□□□□□ -0.91
CASP4-202ENST00000417440 SLC34A2O95436 690 aa9.37□□□□□ -0.91
CASP4-202ENST00000417440 KIF23Q02241 960 aaPredicted RBP9.37□□□□□ -0.91
CASP4-202ENST00000417440 TPRNQ4KMQ1 711 aa9.37□□□□□ -0.91
CASP4-202ENST00000417440 MAMSTRQ6ZN01 415 aa9.37□□□□□ -0.91
CASP4-202ENST00000417440 PHAXQ9H814 394 aaKnown RBP9.37□□□□□ -0.91
CASP4-202ENST00000417440 MBIPQ9NS73 344 aa9.37□□□□□ -0.91
CASP4-202ENST00000417440 GGA3Q9NZ52 723 aa9.37□□□□□ -0.91
CASP4-202ENST00000417440 SCAF8Q9UPN6 1271 aaKnown RBP9.37□□□□□ -0.91
CASP4-202ENST00000417440 RTL9Q8NET4 1388 aa9.37□□□□□ -0.91
CASP4-202ENST00000417440 TULP1O00294 542 aaPredicted RBP9.36□□□□□ -0.91
CASP4-202ENST00000417440 TRPA1O75762 1119 aa9.36□□□□□ -0.91
CASP4-202ENST00000417440 RPS12P25398 132 aaKnown RBP9.36□□□□□ -0.91
CASP4-202ENST00000417440 SULF1Q8IWU6 871 aa9.36□□□□□ -0.91
CASP4-202ENST00000417440 ZBTB38Q8NAP3 1195 aaPredicted RBP9.36□□□□□ -0.91
CASP4-202ENST00000417440 PTCD2Q8WV60 388 aaKnown RBP9.36□□□□□ -0.91
CASP4-202ENST00000417440 CCDC102AQ96A19 550 aa9.36□□□□□ -0.91
CASP4-202ENST00000417440 GGA1Q9UJY5 639 aa9.36□□□□□ -0.91
CASP4-202ENST00000417440 FAM155AB1AL88 458 aaPredicted RBP9.35□□□□□ -0.91
CASP4-202ENST00000417440 VIL1P09327 827 aaKnown RBP9.35□□□□□ -0.91
CASP4-202ENST00000417440 HOXB7P09629 217 aa9.35□□□□□ -0.91
CASP4-202ENST00000417440 PRKCSHP14314 528 aaPredicted RBP9.35□□□□□ -0.91
CASP4-202ENST00000417440 MAP3K9P80192 1104 aa9.35□□□□□ -0.91
CASP4-202ENST00000417440 SCARF1Q14162 830 aa9.35□□□□□ -0.91
CASP4-202ENST00000417440 ANGEL2Q5VTE6 544 aaKnown RBP9.35□□□□□ -0.91
CASP4-202ENST00000417440 SMYD5Q6GMV2 418 aa9.35□□□□□ -0.91
CASP4-202ENST00000417440 FBXW7Q969H0 707 aa9.35□□□□□ -0.91
CASP4-202ENST00000417440 CDCA5Q96FF9 252 aa9.35□□□□□ -0.91
CASP4-202ENST00000417440 DUOX1Q9NRD9 1551 aa9.35□□□□□ -0.91
CASP4-202ENST00000417440 THSD7BQ9C0I4 1608 aa9.34□□□□□ -0.91
CASP4-202ENST00000417440 PDE8AO60658 829 aa9.34□□□□□ -0.91
CASP4-202ENST00000417440 RGS19P49795 217 aa9.34□□□□□ -0.91
CASP4-202ENST00000417440 TRIM28Q13263 835 aaKnown RBP9.34□□□□□ -0.91
CASP4-202ENST00000417440 CCDC152Q4G0S7 254 aa9.34□□□□□ -0.91
CASP4-202ENST00000417440 PRAMEF18Q5VWM3 479 aa9.34□□□□□ -0.91
CASP4-202ENST00000417440 ANKRD18AQ8IVF6 992 aa9.34□□□□□ -0.91
CASP4-202ENST00000417440 RNF186Q9NXI6 227 aa9.34□□□□□ -0.91
CASP4-202ENST00000417440 TAF1P21675 1872 aa9.34□□□□□ -0.91
CASP4-202ENST00000417440 TRPM7Q96QT4 1865 aa9.34□□□□□ -0.91
CASP4-202ENST00000417440 COL4A1P02462 1669 aa9.33□□□□□ -0.92
CASP4-202ENST00000417440 LAMB2P55268 1798 aa9.33□□□□□ -0.92
CASP4-202ENST00000417440 WTIPA6NIX2 430 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms