RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 CDCA5Q96FF9 252 aa18.43■□□□□ 0.54
PAF1-202ENST00000416728 ZIC5Q96T25 663 aa18.43■□□□□ 0.54
PAF1-202ENST00000416728 PLA2G12BQ9BX93 195 aa18.43■□□□□ 0.54
PAF1-202ENST00000416728 SALL2Q9Y467 1007 aaPredicted RBP18.43■□□□□ 0.54
PAF1-202ENST00000416728 ITGA6P23229 1130 aa18.42■□□□□ 0.54
PAF1-202ENST00000416728 ZNF157P51786 506 aaPredicted RBP18.42■□□□□ 0.54
PAF1-202ENST00000416728 FAM161AQ3B820 660 aa18.42■□□□□ 0.54
PAF1-202ENST00000416728 WDR63Q8IWG1 891 aa18.42■□□□□ 0.54
PAF1-202ENST00000416728 LEMD3Q9Y2U8 911 aa18.42■□□□□ 0.54
PAF1-202ENST00000416728 FAM155AB1AL88 458 aaPredicted RBP18.42■□□□□ 0.54
PAF1-202ENST00000416728 FBXW7Q969H0 707 aa18.42■□□□□ 0.54
PAF1-202ENST00000416728 MPHOSPH8Q99549 860 aa18.42■□□□□ 0.54
PAF1-202ENST00000416728 COA1Q9GZY4 146 aa18.42■□□□□ 0.54
PAF1-202ENST00000416728 PITPNM2Q9BZ72 1349 aa18.41■□□□□ 0.54
PAF1-202ENST00000416728 VAMP4O75379 141 aa18.41■□□□□ 0.54
PAF1-202ENST00000416728 ZEB1P37275 1124 aaPredicted RBP18.41■□□□□ 0.54
PAF1-202ENST00000416728 CASP7P55210 303 aa18.41■□□□□ 0.54
PAF1-202ENST00000416728 OGFOD1Q8N543 542 aa18.41■□□□□ 0.54
PAF1-202ENST00000416728 ANKRD2Q9GZV1 360 aa18.41■□□□□ 0.54
PAF1-202ENST00000416728 ZNF804BA4D1E1 1349 aa18.4■□□□□ 0.54
PAF1-202ENST00000416728 MYO3BQ8WXR4 1341 aa18.4■□□□□ 0.54
PAF1-202ENST00000416728 CSF1RP07333 972 aa18.4■□□□□ 0.54
PAF1-202ENST00000416728 EXOSC9Q06265 439 aaKnown RBP18.4■□□□□ 0.54
PAF1-202ENST00000416728 DACT2Q5SW24 774 aa18.4■□□□□ 0.54
PAF1-202ENST00000416728 STRIP1Q5VSL9 837 aa18.4■□□□□ 0.54
PAF1-202ENST00000416728 FKBP1BP68106 108 aa18.39■□□□□ 0.53
PAF1-202ENST00000416728 KIF23Q02241 960 aaPredicted RBP18.39■□□□□ 0.53
PAF1-202ENST00000416728 TXNRD3Q86VQ6 643 aa18.39■□□□□ 0.53
PAF1-202ENST00000416728 MXD3Q9BW11 206 aa18.39■□□□□ 0.53
PAF1-202ENST00000416728 ANKRD18BA2A2Z9 1011 aa18.38■□□□□ 0.53
PAF1-202ENST00000416728 SLC10A3P09131 477 aa18.38■□□□□ 0.53
PAF1-202ENST00000416728 KCNJ4P48050 445 aa18.38■□□□□ 0.53
PAF1-202ENST00000416728 MYH3P11055 1940 aa18.38■□□□□ 0.53
PAF1-202ENST00000416728 PSME4Q14997 1843 aa18.37■□□□□ 0.53
PAF1-202ENST00000416728 ZNF316A6NFI3 1004 aaPredicted RBP18.37■□□□□ 0.53
PAF1-202ENST00000416728 CCDC85CA6NKD9 419 aa18.37■□□□□ 0.53
PAF1-202ENST00000416728 KLRK1P26718 216 aa18.37■□□□□ 0.53
PAF1-202ENST00000416728 NBPF9Q3BBW0 867 aa18.37■□□□□ 0.53
PAF1-202ENST00000416728 SAGE1Q9NXZ1 904 aa18.37■□□□□ 0.53
PAF1-202ENST00000416728 F6X3S4 739 aa18.36■□□□□ 0.53
PAF1-202ENST00000416728 CHRNDQ07001 517 aa18.36■□□□□ 0.53
PAF1-202ENST00000416728 TTLL5Q6EMB2 1281 aa18.36■□□□□ 0.53
PAF1-202ENST00000416728 MCOLN1Q9GZU1 580 aa18.36■□□□□ 0.53
PAF1-202ENST00000416728 SCAF8Q9UPN6 1271 aaKnown RBP18.36■□□□□ 0.53
PAF1-202ENST00000416728 POLR2AP24928 1970 aaKnown RBP18.36■□□□□ 0.53
PAF1-202ENST00000416728 SPEF2Q9C093 1822 aa18.35■□□□□ 0.53
PAF1-202ENST00000416728 WNT10BO00744 389 aa18.35■□□□□ 0.53
PAF1-202ENST00000416728 MMP14P50281 582 aa18.35■□□□□ 0.53
PAF1-202ENST00000416728 IFIT5Q13325 482 aaKnown RBP18.35■□□□□ 0.53
PAF1-202ENST00000416728 RASAL3Q86YV0 1011 aa18.35■□□□□ 0.53
PAF1-202ENST00000416728 CHMP3Q9Y3E7 222 aa18.35■□□□□ 0.53
PAF1-202ENST00000416728 GTF2IP78347 998 aa18.34■□□□□ 0.53
PAF1-202ENST00000416728 DGKZQ13574 1117 aa18.34■□□□□ 0.53
PAF1-202ENST00000416728 BEND3Q5T5X7 828 aa18.34■□□□□ 0.53
PAF1-202ENST00000416728 KIAA0825Q8IV33 1275 aa18.34■□□□□ 0.53
PAF1-202ENST00000416728 SPINK5Q9NQ38 1064 aaPredicted RBP18.34■□□□□ 0.53
PAF1-202ENST00000416728 RNF186Q9NXI6 227 aa18.34■□□□□ 0.53
PAF1-202ENST00000416728 HDAC9Q9UKV0 1011 aa18.34■□□□□ 0.53
PAF1-202ENST00000416728 TRPA1O75762 1119 aa18.33■□□□□ 0.53
PAF1-202ENST00000416728 SASH1O94885 1247 aa18.33■□□□□ 0.53
PAF1-202ENST00000416728 FOXO4P98177 505 aa18.33■□□□□ 0.53
PAF1-202ENST00000416728 PRAMEF18Q5VWM3 479 aa18.33■□□□□ 0.53
PAF1-202ENST00000416728 REM2Q8IYK8 340 aaPredicted RBP18.33■□□□□ 0.53
PAF1-202ENST00000416728 CSRNP1Q96S65 589 aa18.33■□□□□ 0.53
PAF1-202ENST00000416728 PAPPA2Q9BXP8 1791 aa18.33■□□□□ 0.52
PAF1-202ENST00000416728 NF2P35240 595 aa18.32■□□□□ 0.52
PAF1-202ENST00000416728 TTLL12Q14166 644 aaPredicted RBP18.32■□□□□ 0.52
PAF1-202ENST00000416728 MOB2Q70IA6 237 aa18.32■□□□□ 0.52
PAF1-202ENST00000416728 FAM9BQ8IZU0 186 aa18.32■□□□□ 0.52
PAF1-202ENST00000416728 CD209Q9NNX6 404 aa18.32■□□□□ 0.52
PAF1-202ENST00000416728 UBE2Q2LH0YL09 131 aa18.31■□□□□ 0.52
PAF1-202ENST00000416728 SNAP23O00161 211 aa18.31■□□□□ 0.52
PAF1-202ENST00000416728 TAF5LO75529 589 aa18.31■□□□□ 0.52
PAF1-202ENST00000416728 LMBR1LQ6UX01 489 aa18.31■□□□□ 0.52
PAF1-202ENST00000416728 HELBQ8NG08 1087 aaPredicted RBP18.31■□□□□ 0.52
PAF1-202ENST00000416728 GRM8O00222 908 aa18.3■□□□□ 0.52
PAF1-202ENST00000416728 CCDC57Q2TAC2 916 aa18.3■□□□□ 0.52
PAF1-202ENST00000416728 TAF7LQ5H9L4 462 aa18.3■□□□□ 0.52
PAF1-202ENST00000416728 C15orf52Q6ZUT6 534 aaKnown RBP18.3■□□□□ 0.52
PAF1-202ENST00000416728 APOBEC3FQ8IUX4 373 aaKnown RBP18.3■□□□□ 0.52
PAF1-202ENST00000416728 ZNF804AQ7Z570 1209 aa18.3■□□□□ 0.52
PAF1-202ENST00000416728 C9orf78Q9NZ63 289 aaPredicted RBP18.3■□□□□ 0.52
PAF1-202ENST00000416728 CASP8AP2Q9UKL3 1982 aa18.29■□□□□ 0.52
PAF1-202ENST00000416728 IRS2Q9Y4H2 1338 aa18.29■□□□□ 0.52
PAF1-202ENST00000416728 CACNA1FO60840 1977 aa18.29■□□□□ 0.52
PAF1-202ENST00000416728 EPHA10Q5JZY3 1008 aa18.29■□□□□ 0.52
PAF1-202ENST00000416728 SLC4A10Q6U841 1118 aa18.29■□□□□ 0.52
PAF1-202ENST00000416728 LDHAL6AQ6ZMR3 332 aa18.29■□□□□ 0.52
PAF1-202ENST00000416728 ALDH1L1O75891 902 aa18.28■□□□□ 0.52
PAF1-202ENST00000416728 DLGAP5Q15398 846 aa18.28■□□□□ 0.52
PAF1-202ENST00000416728 ZBED3Q96IU2 234 aaPredicted RBP18.28■□□□□ 0.52
PAF1-202ENST00000416728 ZNF594Q96JF6 807 aaPredicted RBP18.28■□□□□ 0.52
PAF1-202ENST00000416728 SRCIN1Q9C0H9 1055 aa18.28■□□□□ 0.52
PAF1-202ENST00000416728 CNNM1Q9NRU3 951 aa18.28■□□□□ 0.52
PAF1-202ENST00000416728 ZNF646O15015 1829 aaPredicted RBP18.28■□□□□ 0.52
PAF1-202ENST00000416728 PLIN1O60240 522 aa18.27■□□□□ 0.51
PAF1-202ENST00000416728 IL1R1P14778 569 aa18.27■□□□□ 0.51
PAF1-202ENST00000416728 MLLT1Q03111 559 aaPredicted RBP18.27■□□□□ 0.51
PAF1-202ENST00000416728 ARMC9Q7Z3E5 817 aa18.27■□□□□ 0.51
PAF1-202ENST00000416728 CERS5Q8N5B7 392 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms