RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 OTOP1Q7RTM1 612 aa12.16□□□□□ -0.46
LINC01238-201ENST00000416204 GCC1Q96CN9 775 aa12.16□□□□□ -0.46
LINC01238-201ENST00000416204 CLMNQ96JQ2 1002 aa12.16□□□□□ -0.46
LINC01238-201ENST00000416204 HYPKQ9NX55 129 aa12.16□□□□□ -0.46
LINC01238-201ENST00000416204 TRIM35Q9UPQ4 493 aa12.16□□□□□ -0.46
LINC01238-201ENST00000416204 ZNF609O15014 1411 aa12.15□□□□□ -0.46
LINC01238-201ENST00000416204 MYCP01106 439 aaPredicted RBP12.15□□□□□ -0.46
LINC01238-201ENST00000416204 EN2P19622 333 aaPredicted RBP12.15□□□□□ -0.46
LINC01238-201ENST00000416204 ATP2B4P23634 1241 aa12.15□□□□□ -0.46
LINC01238-201ENST00000416204 TRIM28Q13263 835 aaKnown RBP12.15□□□□□ -0.46
LINC01238-201ENST00000416204 ARMC9Q7Z3E5 817 aa12.15□□□□□ -0.46
LINC01238-201ENST00000416204 TXNRD3Q86VQ6 643 aa12.15□□□□□ -0.46
LINC01238-201ENST00000416204 KIAA0825Q8IV33 1275 aa12.15□□□□□ -0.46
LINC01238-201ENST00000416204 OGFOD1Q8N543 542 aa12.15□□□□□ -0.46
LINC01238-201ENST00000416204 CD99L2Q8TCZ2 262 aa12.15□□□□□ -0.46
LINC01238-201ENST00000416204 PCDHAC2Q9Y5I4 1007 aa12.15□□□□□ -0.46
LINC01238-201ENST00000416204 IGF2BP3O00425 579 aaKnown RBP eCLIP12.14□□□□□ -0.47
LINC01238-201ENST00000416204 PDE8AO60658 829 aa12.14□□□□□ -0.47
LINC01238-201ENST00000416204 PODNQ7Z5L7 613 aa12.14□□□□□ -0.47
LINC01238-201ENST00000416204 SZT2Q5T011 3432 aa12.14□□□□□ -0.47
LINC01238-201ENST00000416204 PCCAP05165 728 aaPredicted RBP12.13□□□□□ -0.47
LINC01238-201ENST00000416204 FXR1P51114 621 aaKnown RBP eCLIP12.13□□□□□ -0.47
LINC01238-201ENST00000416204 CAP1Q01518 475 aa12.13□□□□□ -0.47
LINC01238-201ENST00000416204 IFNL1Q8IU54 200 aa12.13□□□□□ -0.47
LINC01238-201ENST00000416204 SLC10A4Q96EP9 437 aa12.13□□□□□ -0.47
LINC01238-201ENST00000416204 GREM2Q9H772 168 aa12.13□□□□□ -0.47
LINC01238-201ENST00000416204 MBIPQ9NS73 344 aa12.13□□□□□ -0.47
LINC01238-201ENST00000416204 CWC25Q9NXE8 425 aaPredicted RBP12.13□□□□□ -0.47
LINC01238-201ENST00000416204 MINPP1Q9UNW1 487 aa12.13□□□□□ -0.47
LINC01238-201ENST00000416204 PSME4Q14997 1843 aa12.12□□□□□ -0.47
LINC01238-201ENST00000416204 F8W031 263 aaPredicted RBP12.12□□□□□ -0.47
LINC01238-201ENST00000416204 CCT4P50991 539 aaKnown RBP12.12□□□□□ -0.47
LINC01238-201ENST00000416204 CTSWP56202 376 aa12.12□□□□□ -0.47
LINC01238-201ENST00000416204 NOM1Q5C9Z4 860 aaKnown RBP12.12□□□□□ -0.47
LINC01238-201ENST00000416204 LDLRAD1Q5T700 205 aa12.12□□□□□ -0.47
LINC01238-201ENST00000416204 MED23Q9ULK4 1368 aa12.12□□□□□ -0.47
LINC01238-201ENST00000416204 CLRN2A0PK11 232 aa12.11□□□□□ -0.47
LINC01238-201ENST00000416204 HOXB7P09629 217 aa12.11□□□□□ -0.47
LINC01238-201ENST00000416204 GTF2IP78347 998 aa12.11□□□□□ -0.47
LINC01238-201ENST00000416204 CRHR2Q13324 411 aa12.11□□□□□ -0.47
LINC01238-201ENST00000416204 TTLL5Q6EMB2 1281 aa12.11□□□□□ -0.47
LINC01238-201ENST00000416204 APOBEC3FQ8IUX4 373 aaKnown RBP12.11□□□□□ -0.47
LINC01238-201ENST00000416204 CCDC191Q8NCU4 936 aa12.11□□□□□ -0.47
LINC01238-201ENST00000416204 WNK4Q96J92 1243 aa12.11□□□□□ -0.47
LINC01238-201ENST00000416204 CFHR5Q9BXR6 569 aa12.11□□□□□ -0.47
LINC01238-201ENST00000416204 DEFB129Q9H1M3 183 aa12.11□□□□□ -0.47
LINC01238-201ENST00000416204 COLQQ9Y215 455 aaPredicted RBP12.11□□□□□ -0.47
LINC01238-201ENST00000416204 JAG2Q9Y219 1238 aa12.11□□□□□ -0.47
LINC01238-201ENST00000416204 PTPN22Q9Y2R2 807 aa12.11□□□□□ -0.47
LINC01238-201ENST00000416204 SPEF2Q9C093 1822 aa12.11□□□□□ -0.47
LINC01238-201ENST00000416204 AOX1Q06278 1338 aa12.11□□□□□ -0.47
LINC01238-201ENST00000416204 SSC5DA1L4H1 1573 aa12.1□□□□□ -0.47
LINC01238-201ENST00000416204 MANSC4A6NHS7 340 aaPredicted RBP12.1□□□□□ -0.47
LINC01238-201ENST00000416204 SNAP23O00161 211 aa12.1□□□□□ -0.47
LINC01238-201ENST00000416204 ECM2O94769 699 aaPredicted RBP12.1□□□□□ -0.47
LINC01238-201ENST00000416204 HSP90B1P14625 803 aaKnown RBP12.1□□□□□ -0.47
LINC01238-201ENST00000416204 GJA5P36382 358 aa12.1□□□□□ -0.47
LINC01238-201ENST00000416204 STRIP1Q5VSL9 837 aa12.1□□□□□ -0.47
LINC01238-201ENST00000416204 TTLL11Q8NHH1 800 aa12.1□□□□□ -0.47
LINC01238-201ENST00000416204 CDC5LQ99459 802 aaKnown RBP12.1□□□□□ -0.47
LINC01238-201ENST00000416204 MAP3K2Q9Y2U5 619 aa12.1□□□□□ -0.47
LINC01238-201ENST00000416204 ALDH1A1P00352 501 aa12.09□□□□□ -0.47
LINC01238-201ENST00000416204 CWF19L2Q2TBE0 894 aaKnown RBP12.09□□□□□ -0.47
LINC01238-201ENST00000416204 INTS3Q68E01 1043 aaKnown RBP12.09□□□□□ -0.47
LINC01238-201ENST00000416204 RUNDC1Q96C34 613 aa12.09□□□□□ -0.47
LINC01238-201ENST00000416204 METTL22Q9BUU2 404 aaPredicted RBP12.09□□□□□ -0.47
LINC01238-201ENST00000416204 COA1Q9GZY4 146 aa12.09□□□□□ -0.47
LINC01238-201ENST00000416204 EFCC1Q9HA90 598 aa12.09□□□□□ -0.47
LINC01238-201ENST00000416204 VEZTQ9HBM0 779 aa12.09□□□□□ -0.47
LINC01238-201ENST00000416204 BSDC1Q9NW68 430 aaPredicted RBP12.09□□□□□ -0.47
LINC01238-201ENST00000416204 ZNF646O15015 1829 aaPredicted RBP12.09□□□□□ -0.47
LINC01238-201ENST00000416204 MYO3BQ8WXR4 1341 aa12.09□□□□□ -0.47
LINC01238-201ENST00000416204 IGKV5-2P06315 115 aa12.08□□□□□ -0.48
LINC01238-201ENST00000416204 DLGAP5Q15398 846 aa12.08□□□□□ -0.48
LINC01238-201ENST00000416204 NBPF12Q5TAG4 269 aaPredicted RBP12.08□□□□□ -0.48
LINC01238-201ENST00000416204 CERS5Q8N5B7 392 aa12.08□□□□□ -0.48
LINC01238-201ENST00000416204 C8orf58Q8NAV2 365 aa12.08□□□□□ -0.48
LINC01238-201ENST00000416204 ERO1AQ96HE7 468 aa12.08□□□□□ -0.48
LINC01238-201ENST00000416204 ZBED3Q96IU2 234 aaPredicted RBP12.08□□□□□ -0.48
LINC01238-201ENST00000416204 PTPN18Q99952 460 aa12.08□□□□□ -0.48
LINC01238-201ENST00000416204 ZNF804BA4D1E1 1349 aa12.08□□□□□ -0.48
LINC01238-201ENST00000416204 KCNJ4P48050 445 aa12.07□□□□□ -0.48
LINC01238-201ENST00000416204 WDR43Q15061 677 aaKnown RBP eCLIP12.07□□□□□ -0.48
LINC01238-201ENST00000416204 HELBQ8NG08 1087 aaPredicted RBP12.07□□□□□ -0.48
LINC01238-201ENST00000416204 CNKSR2Q8WXI2 1034 aa12.07□□□□□ -0.48
LINC01238-201ENST00000416204 ARMC5Q96C12 935 aa12.07□□□□□ -0.48
LINC01238-201ENST00000416204 ELP3Q9H9T3 547 aa12.07□□□□□ -0.48
LINC01238-201ENST00000416204 PTCH2Q9Y6C5 1203 aa12.07□□□□□ -0.48
LINC01238-201ENST00000416204 KIAA0100Q14667 2235 aaKnown RBP12.06□□□□□ -0.48
LINC01238-201ENST00000416204 PI4KAP2A4QPH2 592 aa12.06□□□□□ -0.48
LINC01238-201ENST00000416204 H0YGN5 161 aa12.06□□□□□ -0.48
LINC01238-201ENST00000416204 ZBTB48P10074 688 aaPredicted RBP12.06□□□□□ -0.48
LINC01238-201ENST00000416204 IGHMBP2P38935 993 aaKnown RBP12.06□□□□□ -0.48
LINC01238-201ENST00000416204 SP3Q02447 781 aa12.06□□□□□ -0.48
LINC01238-201ENST00000416204 CFAP100Q494V2 611 aa12.06□□□□□ -0.48
LINC01238-201ENST00000416204 UBE3BQ7Z3V4 1068 aa12.06□□□□□ -0.48
LINC01238-201ENST00000416204 CDAN1Q8IWY9 1227 aa12.06□□□□□ -0.48
LINC01238-201ENST00000416204 PI4KAP1Q8N8J0 262 aa12.06□□□□□ -0.48
LINC01238-201ENST00000416204 TMEM106CQ9BVX2 250 aa12.06□□□□□ -0.48
LINC01238-201ENST00000416204 ADAMTS8Q9UP79 889 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms