RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 IRS4O14654 1257 aaPredicted RBP17.04■□□□□ 0.32
CPNE1-209ENST00000415920 RIMBP2O15034 1052 aa17.04■□□□□ 0.32
CPNE1-209ENST00000415920 GPSM2P81274 684 aa17.04■□□□□ 0.32
CPNE1-209ENST00000415920 TNIP1Q15025 636 aa17.04■□□□□ 0.32
CPNE1-209ENST00000415920 USP48Q86UV5 1035 aa17.04■□□□□ 0.32
CPNE1-209ENST00000415920 SUCLG2Q96I99 432 aa17.04■□□□□ 0.32
CPNE1-209ENST00000415920 POLLQ9UGP5 575 aa17.04■□□□□ 0.32
CPNE1-209ENST00000415920 CASP8AP2Q9UKL3 1982 aa17.04■□□□□ 0.32
CPNE1-209ENST00000415920 RTL9Q8NET4 1388 aa17.03■□□□□ 0.32
CPNE1-209ENST00000415920 H7C1W4 665 aa17.03■□□□□ 0.32
CPNE1-209ENST00000415920 CASP7P55210 303 aa17.03■□□□□ 0.32
CPNE1-209ENST00000415920 EXOC6Q8TAG9 804 aa17.03■□□□□ 0.32
CPNE1-209ENST00000415920 NSFL1CQ9UNZ2 370 aaKnown RBP17.03■□□□□ 0.32
CPNE1-209ENST00000415920 LRRFIP2Q9Y608 721 aaKnown RBP17.03■□□□□ 0.32
CPNE1-209ENST00000415920 MAP2K2P36507 400 aa17.02■□□□□ 0.32
CPNE1-209ENST00000415920 SF3B3Q15393 1217 aaKnown RBP17.02■□□□□ 0.32
CPNE1-209ENST00000415920 DOK7Q18PE1 504 aa17.02■□□□□ 0.32
CPNE1-209ENST00000415920 FAM161AQ3B820 660 aa17.02■□□□□ 0.32
CPNE1-209ENST00000415920 TBC1D10BQ4KMP7 808 aaPredicted RBP17.02■□□□□ 0.32
CPNE1-209ENST00000415920 ZC3H15Q8WU90 426 aaKnown RBP17.02■□□□□ 0.32
CPNE1-209ENST00000415920 BEGAINQ9BUH8 593 aa17.02■□□□□ 0.32
CPNE1-209ENST00000415920 CHMP4BQ9H444 224 aaKnown RBP17.02■□□□□ 0.32
CPNE1-209ENST00000415920 ZBTB7BO15156 539 aaPredicted RBP17.01■□□□□ 0.31
CPNE1-209ENST00000415920 PDE8AO60658 829 aa17.01■□□□□ 0.31
CPNE1-209ENST00000415920 GNAI2P04899 355 aa17.01■□□□□ 0.31
CPNE1-209ENST00000415920 HSP90B1P14625 803 aaKnown RBP17.01■□□□□ 0.31
CPNE1-209ENST00000415920 WASHC4Q2M389 1173 aa17.01■□□□□ 0.31
CPNE1-209ENST00000415920 CDC37L1Q7L3B6 337 aa17.01■□□□□ 0.31
CPNE1-209ENST00000415920 BICC1Q9H694 974 aaKnown RBP17.01■□□□□ 0.31
CPNE1-209ENST00000415920 CHMP3Q9Y3E7 222 aa17.01■□□□□ 0.31
CPNE1-209ENST00000415920 CCDC85CA6NKD9 419 aa17■□□□□ 0.31
CPNE1-209ENST00000415920 ADM5C9JUS6 153 aa17■□□□□ 0.31
CPNE1-209ENST00000415920 C6orf229H3BNL8 230 aa17■□□□□ 0.31
CPNE1-209ENST00000415920 CTSWP56202 376 aa17■□□□□ 0.31
CPNE1-209ENST00000415920 TMC4Q7Z404 712 aa17■□□□□ 0.31
CPNE1-209ENST00000415920 CCDC85AQ96PX6 553 aaPredicted RBP17■□□□□ 0.31
CPNE1-209ENST00000415920 SEC31BQ9NQW1 1179 aa17■□□□□ 0.31
CPNE1-209ENST00000415920 HDAC5Q9UQL6 1122 aa17■□□□□ 0.31
CPNE1-209ENST00000415920 ASTN2O75129 1339 aaPredicted RBP16.99■□□□□ 0.31
CPNE1-209ENST00000415920 H7C1D1 291 aa16.99■□□□□ 0.31
CPNE1-209ENST00000415920 ECE2O60344 883 aa16.99■□□□□ 0.31
CPNE1-209ENST00000415920 RBM26Q5T8P6 1007 aaKnown RBP16.99■□□□□ 0.31
CPNE1-209ENST00000415920 TBC1D16Q8TBP0 767 aa16.99■□□□□ 0.31
CPNE1-209ENST00000415920 HHIPL1Q96JK4 782 aa16.99■□□□□ 0.31
CPNE1-209ENST00000415920 ZBTB40Q9NUA8 1239 aa16.99■□□□□ 0.31
CPNE1-209ENST00000415920 HUNKP57058 714 aa16.98■□□□□ 0.31
CPNE1-209ENST00000415920 EPHA10Q5JZY3 1008 aa16.98■□□□□ 0.31
CPNE1-209ENST00000415920 DPF2Q92785 391 aa16.98■□□□□ 0.31
CPNE1-209ENST00000415920 KAZALD1Q96I82 304 aa16.98■□□□□ 0.31
CPNE1-209ENST00000415920 PLA2G12BQ9BX93 195 aa16.98■□□□□ 0.31
CPNE1-209ENST00000415920 FOXO4P98177 505 aa16.97■□□□□ 0.31
CPNE1-209ENST00000415920 ANKRD44Q8N8A2 993 aa16.97■□□□□ 0.31
CPNE1-209ENST00000415920 MCOLN1Q9GZU1 580 aa16.97■□□□□ 0.31
CPNE1-209ENST00000415920 FAM155AB1AL88 458 aaPredicted RBP16.96■□□□□ 0.31
CPNE1-209ENST00000415920 RPS8P62241 208 aaKnown RBP16.96■□□□□ 0.31
CPNE1-209ENST00000415920 CCDC152Q4G0S7 254 aa16.96■□□□□ 0.31
CPNE1-209ENST00000415920 LMBR1LQ6UX01 489 aa16.96■□□□□ 0.31
CPNE1-209ENST00000415920 KRT26Q7Z3Y9 468 aa16.96■□□□□ 0.31
CPNE1-209ENST00000415920 RABL6Q3YEC7 729 aaPredicted RBP16.95■□□□□ 0.3
CPNE1-209ENST00000415920 GREM2Q9H772 168 aa16.95■□□□□ 0.3
CPNE1-209ENST00000415920 PSME4Q14997 1843 aa16.94■□□□□ 0.3
CPNE1-209ENST00000415920 WTIPA6NIX2 430 aaPredicted RBP16.94■□□□□ 0.3
CPNE1-209ENST00000415920 UFL1O94874 794 aa16.94■□□□□ 0.3
CPNE1-209ENST00000415920 KIF4BQ2VIQ3 1234 aa16.94■□□□□ 0.3
CPNE1-209ENST00000415920 CEP85Q6P2H3 762 aa16.94■□□□□ 0.3
CPNE1-209ENST00000415920 TTLL11Q8NHH1 800 aa16.94■□□□□ 0.3
CPNE1-209ENST00000415920 GBA2Q9HCG7 927 aaPredicted RBP16.94■□□□□ 0.3
CPNE1-209ENST00000415920 ARAP2Q8WZ64 1704 aa16.93■□□□□ 0.3
CPNE1-209ENST00000415920 SRGAP3O43295 1099 aa16.93■□□□□ 0.3
CPNE1-209ENST00000415920 CA12O43570 354 aa16.93■□□□□ 0.3
CPNE1-209ENST00000415920 VIL1P09327 827 aaKnown RBP16.93■□□□□ 0.3
CPNE1-209ENST00000415920 RPS12P25398 132 aaKnown RBP16.93■□□□□ 0.3
CPNE1-209ENST00000415920 NOGQ13253 232 aa16.93■□□□□ 0.3
CPNE1-209ENST00000415920 TAF7LQ5H9L4 462 aa16.93■□□□□ 0.3
CPNE1-209ENST00000415920 RGMBQ6NW40 437 aa16.93■□□□□ 0.3
CPNE1-209ENST00000415920 EYA3Q99504 573 aa16.93■□□□□ 0.3
CPNE1-209ENST00000415920 GGA3Q9NZ52 723 aa16.93■□□□□ 0.3
CPNE1-209ENST00000415920 PODXL2Q9NZ53 605 aa16.93■□□□□ 0.3
CPNE1-209ENST00000415920 MYH13Q9UKX3 1938 aa16.93■□□□□ 0.3
CPNE1-209ENST00000415920 ZNF646O15015 1829 aaPredicted RBP16.92■□□□□ 0.3
CPNE1-209ENST00000415920 PNMA6EA0A0J9YXQ4 647 aa16.92■□□□□ 0.3
CPNE1-209ENST00000415920 ITGA6P23229 1130 aa16.92■□□□□ 0.3
CPNE1-209ENST00000415920 IFIT5Q13325 482 aaKnown RBP16.92■□□□□ 0.3
CPNE1-209ENST00000415920 CCDC57Q2TAC2 916 aa16.92■□□□□ 0.3
CPNE1-209ENST00000415920 DCPSQ96C86 337 aaKnown RBP16.92■□□□□ 0.3
CPNE1-209ENST00000415920 SCAF8Q9UPN6 1271 aaKnown RBP16.92■□□□□ 0.3
CPNE1-209ENST00000415920 ANKRD18BA2A2Z9 1011 aa16.91■□□□□ 0.3
CPNE1-209ENST00000415920 CSF1RP07333 972 aa16.91■□□□□ 0.3
CPNE1-209ENST00000415920 RGS19P49795 217 aa16.91■□□□□ 0.3
CPNE1-209ENST00000415920 KIF23Q02241 960 aaPredicted RBP16.91■□□□□ 0.3
CPNE1-209ENST00000415920 MTX1Q13505 466 aa16.91■□□□□ 0.3
CPNE1-209ENST00000415920 DGKZQ13574 1117 aa16.91■□□□□ 0.3
CPNE1-209ENST00000415920 AAMPQ13685 434 aa16.91■□□□□ 0.3
CPNE1-209ENST00000415920 ZC3H12CQ9C0D7 883 aaKnown RBP16.91■□□□□ 0.3
CPNE1-209ENST00000415920 ANKIB1Q9P2G1 1089 aa16.91■□□□□ 0.3
CPNE1-209ENST00000415920 MLLT1Q03111 559 aaPredicted RBP16.9■□□□□ 0.3
CPNE1-209ENST00000415920 CDCA5Q96FF9 252 aa16.9■□□□□ 0.3
CPNE1-209ENST00000415920 CDC5LQ99459 802 aaKnown RBP16.9■□□□□ 0.3
CPNE1-209ENST00000415920 GGA1Q9UJY5 639 aa16.9■□□□□ 0.3
CPNE1-209ENST00000415920 PCDHB15Q9Y5E8 787 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms