RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 MSL1Q68DK7 614 aa20.92■□□□□ 0.94
SHANK3-202ENST00000414786 GSDMBQ8TAX9 411 aa20.92■□□□□ 0.94
SHANK3-202ENST00000414786 STK25O00506 426 aa20.92■□□□□ 0.94
SHANK3-202ENST00000414786 HMGB1P09429 215 aaKnown RBP20.92■□□□□ 0.94
SHANK3-202ENST00000414786 MCM4P33991 863 aa20.92■□□□□ 0.94
SHANK3-202ENST00000414786 FMNL3Q8IVF7 1028 aa20.92■□□□□ 0.94
SHANK3-202ENST00000414786 CCDC172P0C7W6 258 aa20.92■□□□□ 0.94
SHANK3-202ENST00000414786 MCM9Q9NXL9 1143 aa20.92■□□□□ 0.94
SHANK3-202ENST00000414786 PTPDC1A2A3K4 754 aa20.92■□□□□ 0.94
SHANK3-202ENST00000414786 TTC30AQ86WT1 665 aa20.92■□□□□ 0.94
SHANK3-202ENST00000414786 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.92■□□□□ 0.94
SHANK3-202ENST00000414786 STX1AQ16623 288 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 PPP4R3BQ5MIZ7 849 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 NEK1Q96PY6 1258 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 MKRN1Q9UHC7 482 aaKnown RBP20.91■□□□□ 0.94
SHANK3-202ENST00000414786 RSPH14Q9UHP6 348 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 ZEB2O60315 1214 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 ADCY5O95622 1261 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 SYKP43405 635 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 NBPF8Q3BBV2 869 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 NBPF14Q5TI25 921 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 TRIM7Q9C029 511 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 KARSQ15046 597 aaKnown RBP20.91■□□□□ 0.94
SHANK3-202ENST00000414786 PICK1Q9NRD5 415 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 KRT19P08727 400 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 RTN1Q16799 776 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 IRAK4Q9NWZ3 460 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 SCAND2PQ9GZW5 306 aaPredicted RBP20.9■□□□□ 0.94
SHANK3-202ENST00000414786 BSPRYQ5W0U4 402 aa20.9■□□□□ 0.94
SHANK3-202ENST00000414786 CCDC102BQ68D86 513 aa20.9■□□□□ 0.94
SHANK3-202ENST00000414786 USP37Q86T82 979 aa20.9■□□□□ 0.94
SHANK3-202ENST00000414786 PLVAPQ9BX97 442 aa20.9■□□□□ 0.94
SHANK3-202ENST00000414786 MAN1A1P33908 653 aa20.9■□□□□ 0.94
SHANK3-202ENST00000414786 ZNF804AQ7Z570 1209 aa20.9■□□□□ 0.94
SHANK3-202ENST00000414786 NOP56O00567 594 aaKnown RBP20.9■□□□□ 0.94
SHANK3-202ENST00000414786 NLRP3Q96P20 1036 aa20.9■□□□□ 0.94
SHANK3-202ENST00000414786 MAGEB6P1A0A0J9YX57 407 aa20.9■□□□□ 0.94
SHANK3-202ENST00000414786 KIF5AQ12840 1032 aa20.9■□□□□ 0.94
SHANK3-202ENST00000414786 PDE3AQ14432 1141 aa20.9■□□□□ 0.94
SHANK3-202ENST00000414786 USTQ9Y2C2 406 aa20.9■□□□□ 0.94
SHANK3-202ENST00000414786 TACC3Q9Y6A5 838 aa20.9■□□□□ 0.94
SHANK3-202ENST00000414786 HSPA4P34932 840 aa20.89■□□□□ 0.94
SHANK3-202ENST00000414786 CEP57Q86XR8 500 aa20.89■□□□□ 0.94
SHANK3-202ENST00000414786 NSD3Q9BZ95 1437 aa20.89■□□□□ 0.93
SHANK3-202ENST00000414786 ESPNB1AK53 854 aa20.89■□□□□ 0.93
SHANK3-202ENST00000414786 MAGEB6Q8N7X4 407 aa20.89■□□□□ 0.93
SHANK3-202ENST00000414786 BZW2Q9Y6E2 419 aaKnown RBP20.89■□□□□ 0.93
SHANK3-202ENST00000414786 CHMP6Q96FZ7 201 aa20.89■□□□□ 0.93
SHANK3-202ENST00000414786 AAMPQ13685 434 aa20.89■□□□□ 0.93
SHANK3-202ENST00000414786 PHF8Q9UPP1 1060 aa20.89■□□□□ 0.93
SHANK3-202ENST00000414786 LIMCH1Q9UPQ0 1083 aa20.89■□□□□ 0.93
SHANK3-202ENST00000414786 VPS52Q8N1B4 723 aa20.88■□□□□ 0.93
SHANK3-202ENST00000414786 ZBTB43O43298 467 aa20.88■□□□□ 0.93
SHANK3-202ENST00000414786 LEO1Q8WVC0 666 aaPredicted RBP20.88■□□□□ 0.93
SHANK3-202ENST00000414786 UBLCP1Q8WVY7 318 aaPredicted RBP20.88■□□□□ 0.93
SHANK3-202ENST00000414786 FNBP1Q96RU3 617 aa20.88■□□□□ 0.93
SHANK3-202ENST00000414786 PI4KAP2A4QPH2 592 aa20.88■□□□□ 0.93
SHANK3-202ENST00000414786 RPAP2Q8IXW5 612 aaPredicted RBP20.88■□□□□ 0.93
SHANK3-202ENST00000414786 PI4KAP1Q8N8J0 262 aa20.88■□□□□ 0.93
SHANK3-202ENST00000414786 CLGNO14967 610 aa20.88■□□□□ 0.93
SHANK3-202ENST00000414786 ANKRD24Q8TF21 1146 aa20.88■□□□□ 0.93
SHANK3-202ENST00000414786 TMOD4Q9NZQ9 345 aa20.88■□□□□ 0.93
SHANK3-202ENST00000414786 AMOTL2Q9Y2J4 779 aa20.88■□□□□ 0.93
SHANK3-202ENST00000414786 CCDC14Q49A88 953 aa20.88■□□□□ 0.93
SHANK3-202ENST00000414786 CCDC170Q8IYT3 715 aa20.87■□□□□ 0.93
SHANK3-202ENST00000414786 RRP36Q96EU6 259 aaKnown RBP20.87■□□□□ 0.93
SHANK3-202ENST00000414786 RABEP2Q9H5N1 569 aa20.87■□□□□ 0.93
SHANK3-202ENST00000414786 ANKRD50Q9ULJ7 1429 aa20.87■□□□□ 0.93
SHANK3-202ENST00000414786 GPR162Q16538 588 aa20.87■□□□□ 0.93
SHANK3-202ENST00000414786 CASC4Q6P4E1 433 aa20.87■□□□□ 0.93
SHANK3-202ENST00000414786 ATP2A1O14983 1001 aa20.87■□□□□ 0.93
SHANK3-202ENST00000414786 TCP10Q12799 353 aa20.87■□□□□ 0.93
SHANK3-202ENST00000414786 NBPF7P0C2Y1 421 aaPredicted RBP20.87■□□□□ 0.93
SHANK3-202ENST00000414786 CPXCR1Q8N123 301 aa20.87■□□□□ 0.93
SHANK3-202ENST00000414786 GOLGA1Q92805 767 aa20.87■□□□□ 0.93
SHANK3-202ENST00000414786 TBC1D31Q96DN5 1066 aa20.87■□□□□ 0.93
SHANK3-202ENST00000414786 GTPBP4Q9BZE4 634 aaKnown RBP20.87■□□□□ 0.93
SHANK3-202ENST00000414786 PPFIA1Q13136 1202 aa20.87■□□□□ 0.93
SHANK3-202ENST00000414786 PDE1CQ14123 709 aaPredicted RBP20.87■□□□□ 0.93
SHANK3-202ENST00000414786 BRF1Q92994 677 aa20.86■□□□□ 0.93
SHANK3-202ENST00000414786 FAM204AQ9H8W3 233 aa20.86■□□□□ 0.93
SHANK3-202ENST00000414786 IVNS1ABPQ9Y6Y0 642 aa20.86■□□□□ 0.93
SHANK3-202ENST00000414786 USH1GQ495M9 461 aa20.86■□□□□ 0.93
SHANK3-202ENST00000414786 WDR63Q8IWG1 891 aa20.86■□□□□ 0.93
SHANK3-202ENST00000414786 EVI5LQ96CN4 794 aa20.86■□□□□ 0.93
SHANK3-202ENST00000414786 GUCA1BQ9UMX6 200 aa20.86■□□□□ 0.93
SHANK3-202ENST00000414786 UBXN1Q04323 297 aa20.86■□□□□ 0.93
SHANK3-202ENST00000414786 ABCF3Q9NUQ8 709 aa20.85■□□□□ 0.93
SHANK3-202ENST00000414786 FEZ2Q9UHY8 353 aaPredicted RBP20.85■□□□□ 0.93
SHANK3-202ENST00000414786 BRD4O60885 1362 aaPredicted RBP20.85■□□□□ 0.93
SHANK3-202ENST00000414786 RAD51AP2Q09MP3 1159 aa20.85■□□□□ 0.93
SHANK3-202ENST00000414786 AMOTQ4VCS5 1084 aa20.85■□□□□ 0.93
SHANK3-202ENST00000414786 SKA2Q8WVK7 121 aaPredicted RBP20.85■□□□□ 0.93
SHANK3-202ENST00000414786 NACADO15069 1562 aa20.85■□□□□ 0.93
SHANK3-202ENST00000414786 NSRP1Q9H0G5 558 aaKnown RBP20.85■□□□□ 0.93
SHANK3-202ENST00000414786 SLC9C2Q5TAH2 1124 aa20.85■□□□□ 0.93
SHANK3-202ENST00000414786 JAKMIP2Q96AA8 810 aa20.85■□□□□ 0.93
SHANK3-202ENST00000414786 PAGR1Q9BTK6 254 aa20.85■□□□□ 0.93
SHANK3-202ENST00000414786 LRRC27Q9C0I9 530 aa20.85■□□□□ 0.93
SHANK3-202ENST00000414786 CACYBPQ9HB71 228 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms