RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 MSL1Q68DK7 614 aa20.92■□□□□ 0.94
SHANK3-202ENST00000414786 GSDMBQ8TAX9 411 aa20.92■□□□□ 0.94
SHANK3-202ENST00000414786 STK25O00506 426 aa20.92■□□□□ 0.94
SHANK3-202ENST00000414786 HMGB1P09429 215 aaKnown RBP20.92■□□□□ 0.94
SHANK3-202ENST00000414786 MCM4P33991 863 aa20.92■□□□□ 0.94
SHANK3-202ENST00000414786 FMNL3Q8IVF7 1028 aa20.92■□□□□ 0.94
SHANK3-202ENST00000414786 CCDC172P0C7W6 258 aa20.92■□□□□ 0.94
SHANK3-202ENST00000414786 MCM9Q9NXL9 1143 aa20.92■□□□□ 0.94
SHANK3-202ENST00000414786 PTPDC1A2A3K4 754 aa20.92■□□□□ 0.94
SHANK3-202ENST00000414786 TTC30AQ86WT1 665 aa20.92■□□□□ 0.94
SHANK3-202ENST00000414786 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.92■□□□□ 0.94
SHANK3-202ENST00000414786 STX1AQ16623 288 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 PPP4R3BQ5MIZ7 849 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 NEK1Q96PY6 1258 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 MKRN1Q9UHC7 482 aaKnown RBP20.91■□□□□ 0.94
SHANK3-202ENST00000414786 RSPH14Q9UHP6 348 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 ZEB2O60315 1214 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 ADCY5O95622 1261 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 SYKP43405 635 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 NBPF8Q3BBV2 869 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 NBPF14Q5TI25 921 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 TRIM7Q9C029 511 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 KARSQ15046 597 aaKnown RBP20.91■□□□□ 0.94
SHANK3-202ENST00000414786 PICK1Q9NRD5 415 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 KRT19P08727 400 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 RTN1Q16799 776 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 IRAK4Q9NWZ3 460 aa20.91■□□□□ 0.94
SHANK3-202ENST00000414786 SCAND2PQ9GZW5 306 aaPredicted RBP20.9■□□□□ 0.94
SHANK3-202ENST00000414786 BSPRYQ5W0U4 402 aa20.9■□□□□ 0.94
SHANK3-202ENST00000414786 CCDC102BQ68D86 513 aa20.9■□□□□ 0.94
SHANK3-202ENST00000414786 USP37Q86T82 979 aa20.9■□□□□ 0.94
SHANK3-202ENST00000414786 PLVAPQ9BX97 442 aa20.9■□□□□ 0.94
SHANK3-202ENST00000414786 MAN1A1P33908 653 aa20.9■□□□□ 0.94
SHANK3-202ENST00000414786 ZNF804AQ7Z570 1209 aa20.9■□□□□ 0.94
SHANK3-202ENST00000414786 NOP56O00567 594 aaKnown RBP20.9■□□□□ 0.94
SHANK3-202ENST00000414786 NLRP3Q96P20 1036 aa20.9■□□□□ 0.94
SHANK3-202ENST00000414786 MAGEB6P1A0A0J9YX57 407 aa20.9■□□□□ 0.94
SHANK3-202ENST00000414786 KIF5AQ12840 1032 aa20.9■□□□□ 0.94
SHANK3-202ENST00000414786 PDE3AQ14432 1141 aa20.9■□□□□ 0.94
SHANK3-202ENST00000414786 USTQ9Y2C2 406 aa20.9■□□□□ 0.94
SHANK3-202ENST00000414786 TACC3Q9Y6A5 838 aa20.9■□□□□ 0.94
SHANK3-202ENST00000414786 HSPA4P34932 840 aa20.89■□□□□ 0.94
SHANK3-202ENST00000414786 CEP57Q86XR8 500 aa20.89■□□□□ 0.94
SHANK3-202ENST00000414786 NSD3Q9BZ95 1437 aa20.89■□□□□ 0.93
SHANK3-202ENST00000414786 ESPNB1AK53 854 aa20.89■□□□□ 0.93
SHANK3-202ENST00000414786 MAGEB6Q8N7X4 407 aa20.89■□□□□ 0.93
SHANK3-202ENST00000414786 BZW2Q9Y6E2 419 aaKnown RBP20.89■□□□□ 0.93
SHANK3-202ENST00000414786 CHMP6Q96FZ7 201 aa20.89■□□□□ 0.93
SHANK3-202ENST00000414786 AAMPQ13685 434 aa20.89■□□□□ 0.93
SHANK3-202ENST00000414786 PHF8Q9UPP1 1060 aa20.89■□□□□ 0.93
SHANK3-202ENST00000414786 LIMCH1Q9UPQ0 1083 aa20.89■□□□□ 0.93
SHANK3-202ENST00000414786 VPS52Q8N1B4 723 aa20.88■□□□□ 0.93
SHANK3-202ENST00000414786 ZBTB43O43298 467 aa20.88■□□□□ 0.93
SHANK3-202ENST00000414786 LEO1Q8WVC0 666 aaPredicted RBP20.88■□□□□ 0.93
SHANK3-202ENST00000414786 UBLCP1Q8WVY7 318 aaPredicted RBP20.88■□□□□ 0.93
SHANK3-202ENST00000414786 FNBP1Q96RU3 617 aa20.88■□□□□ 0.93
SHANK3-202ENST00000414786 PI4KAP2A4QPH2 592 aa20.88■□□□□ 0.93
SHANK3-202ENST00000414786 RPAP2Q8IXW5 612 aaPredicted RBP20.88■□□□□ 0.93
SHANK3-202ENST00000414786 PI4KAP1Q8N8J0 262 aa20.88■□□□□ 0.93
SHANK3-202ENST00000414786 CLGNO14967 610 aa20.88■□□□□ 0.93
SHANK3-202ENST00000414786 ANKRD24Q8TF21 1146 aa20.88■□□□□ 0.93
SHANK3-202ENST00000414786 TMOD4Q9NZQ9 345 aa20.88■□□□□ 0.93
SHANK3-202ENST00000414786 AMOTL2Q9Y2J4 779 aa20.88■□□□□ 0.93
SHANK3-202ENST00000414786 CCDC14Q49A88 953 aa20.88■□□□□ 0.93
SHANK3-202ENST00000414786 CCDC170Q8IYT3 715 aa20.87■□□□□ 0.93
SHANK3-202ENST00000414786 RRP36Q96EU6 259 aaKnown RBP20.87■□□□□ 0.93
SHANK3-202ENST00000414786 RABEP2Q9H5N1 569 aa20.87■□□□□ 0.93
SHANK3-202ENST00000414786 ANKRD50Q9ULJ7 1429 aa20.87■□□□□ 0.93
SHANK3-202ENST00000414786 GPR162Q16538 588 aa20.87■□□□□ 0.93
SHANK3-202ENST00000414786 CASC4Q6P4E1 433 aa20.87■□□□□ 0.93
SHANK3-202ENST00000414786 ATP2A1O14983 1001 aa20.87■□□□□ 0.93
SHANK3-202ENST00000414786 TCP10Q12799 353 aa20.87■□□□□ 0.93
SHANK3-202ENST00000414786 NBPF7P0C2Y1 421 aaPredicted RBP20.87■□□□□ 0.93
SHANK3-202ENST00000414786 CPXCR1Q8N123 301 aa20.87■□□□□ 0.93
SHANK3-202ENST00000414786 GOLGA1Q92805 767 aa20.87■□□□□ 0.93
SHANK3-202ENST00000414786 TBC1D31Q96DN5 1066 aa20.87■□□□□ 0.93
SHANK3-202ENST00000414786 GTPBP4Q9BZE4 634 aaKnown RBP20.87■□□□□ 0.93
SHANK3-202ENST00000414786 PPFIA1Q13136 1202 aa20.87■□□□□ 0.93
SHANK3-202ENST00000414786 PDE1CQ14123 709 aaPredicted RBP20.87■□□□□ 0.93
SHANK3-202ENST00000414786 BRF1Q92994 677 aa20.86■□□□□ 0.93
SHANK3-202ENST00000414786 FAM204AQ9H8W3 233 aa20.86■□□□□ 0.93
SHANK3-202ENST00000414786 IVNS1ABPQ9Y6Y0 642 aa20.86■□□□□ 0.93
SHANK3-202ENST00000414786 USH1GQ495M9 461 aa20.86■□□□□ 0.93
SHANK3-202ENST00000414786 WDR63Q8IWG1 891 aa20.86■□□□□ 0.93
SHANK3-202ENST00000414786 EVI5LQ96CN4 794 aa20.86■□□□□ 0.93
SHANK3-202ENST00000414786 GUCA1BQ9UMX6 200 aa20.86■□□□□ 0.93
SHANK3-202ENST00000414786 UBXN1Q04323 297 aa20.86■□□□□ 0.93
SHANK3-202ENST00000414786 ABCF3Q9NUQ8 709 aa20.85■□□□□ 0.93
SHANK3-202ENST00000414786 FEZ2Q9UHY8 353 aaPredicted RBP20.85■□□□□ 0.93
SHANK3-202ENST00000414786 BRD4O60885 1362 aaPredicted RBP20.85■□□□□ 0.93
SHANK3-202ENST00000414786 RAD51AP2Q09MP3 1159 aa20.85■□□□□ 0.93
SHANK3-202ENST00000414786 AMOTQ4VCS5 1084 aa20.85■□□□□ 0.93
SHANK3-202ENST00000414786 SKA2Q8WVK7 121 aaPredicted RBP20.85■□□□□ 0.93
SHANK3-202ENST00000414786 NACADO15069 1562 aa20.85■□□□□ 0.93
SHANK3-202ENST00000414786 NSRP1Q9H0G5 558 aaKnown RBP20.85■□□□□ 0.93
SHANK3-202ENST00000414786 SLC9C2Q5TAH2 1124 aa20.85■□□□□ 0.93
SHANK3-202ENST00000414786 JAKMIP2Q96AA8 810 aa20.85■□□□□ 0.93
SHANK3-202ENST00000414786 PAGR1Q9BTK6 254 aa20.85■□□□□ 0.93
SHANK3-202ENST00000414786 LRRC27Q9C0I9 530 aa20.85■□□□□ 0.93
SHANK3-202ENST00000414786 CACYBPQ9HB71 228 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms