RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 LILRB5O75023 590 aa6.66□□□□□ -1.34
HMGB1P11-201ENST00000413899 IRS1P35568 1242 aa6.66□□□□□ -1.34
HMGB1P11-201ENST00000413899 AFF1P51825 1210 aaKnown RBP6.66□□□□□ -1.34
HMGB1P11-201ENST00000413899 COL9A3Q14050 684 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P11-201ENST00000413899 PRPF40BQ6NWY9 871 aaKnown RBP6.66□□□□□ -1.34
HMGB1P11-201ENST00000413899 LINC00114Q6XXX2 140 aa6.66□□□□□ -1.34
HMGB1P11-201ENST00000413899 CCNJLQ8IV13 435 aa6.66□□□□□ -1.34
HMGB1P11-201ENST00000413899 NXPE3Q969Y0 559 aa6.66□□□□□ -1.34
HMGB1P11-201ENST00000413899 TCF12Q99081 682 aa6.66□□□□□ -1.34
HMGB1P11-201ENST00000413899 BCL2L13Q9BXK5 485 aa6.66□□□□□ -1.34
HMGB1P11-201ENST00000413899 JPH1Q9HDC5 661 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P11-201ENST00000413899 NLRP2Q9NX02 1062 aa6.66□□□□□ -1.34
HMGB1P11-201ENST00000413899 PDE2AO00408 941 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P11-201ENST00000413899 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.65□□□□□ -1.34
HMGB1P11-201ENST00000413899 CEP135Q66GS9 1140 aa6.65□□□□□ -1.34
HMGB1P11-201ENST00000413899 NUDT8Q8WV74 236 aa6.65□□□□□ -1.34
HMGB1P11-201ENST00000413899 POP1Q99575 1024 aaKnown RBP6.65□□□□□ -1.34
HMGB1P11-201ENST00000413899 ADAM19Q9H013 955 aa6.65□□□□□ -1.34
HMGB1P11-201ENST00000413899 ADAMTS8Q9UP79 889 aa6.65□□□□□ -1.34
HMGB1P11-201ENST00000413899 TRAK1Q9UPV9 953 aa6.65□□□□□ -1.34
HMGB1P11-201ENST00000413899 NID1P14543 1247 aa6.64□□□□□ -1.35
HMGB1P11-201ENST00000413899 GNA15P30679 374 aa6.64□□□□□ -1.35
HMGB1P11-201ENST00000413899 SNRPNP63162 240 aaKnown RBP6.64□□□□□ -1.35
HMGB1P11-201ENST00000413899 GRM2Q14416 872 aa6.64□□□□□ -1.35
HMGB1P11-201ENST00000413899 ZNF326Q5BKZ1 582 aaKnown RBP6.64□□□□□ -1.35
HMGB1P11-201ENST00000413899 PI16Q6UXB8 463 aa6.64□□□□□ -1.35
HMGB1P11-201ENST00000413899 C8orf86Q6ZUL3 223 aa6.64□□□□□ -1.35
HMGB1P11-201ENST00000413899 HHIPQ96QV1 700 aa6.64□□□□□ -1.35
HMGB1P11-201ENST00000413899 DUSP9Q99956 384 aaKnown RBP6.64□□□□□ -1.35
HMGB1P11-201ENST00000413899 SRCIN1Q9C0H9 1055 aa6.64□□□□□ -1.35
HMGB1P11-201ENST00000413899 EHD4Q9H223 541 aa6.64□□□□□ -1.35
HMGB1P11-201ENST00000413899 LIN7BQ9HAP6 207 aa6.64□□□□□ -1.35
HMGB1P11-201ENST00000413899 TRIM33Q9UPN9 1127 aa6.64□□□□□ -1.35
HMGB1P11-201ENST00000413899 SPG7Q9UQ90 795 aa6.64□□□□□ -1.35
HMGB1P11-201ENST00000413899 PIK3R2O00459 728 aa6.63□□□□□ -1.35
HMGB1P11-201ENST00000413899 GADD45BO75293 160 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P11-201ENST00000413899 PTPRAP18433 802 aa6.63□□□□□ -1.35
HMGB1P11-201ENST00000413899 BAG6P46379 1132 aa6.63□□□□□ -1.35
HMGB1P11-201ENST00000413899 DAB2P98082 770 aa6.63□□□□□ -1.35
HMGB1P11-201ENST00000413899 TAGLNQ01995 201 aaKnown RBP6.63□□□□□ -1.35
HMGB1P11-201ENST00000413899 GLIS3Q8NEA6 775 aa6.63□□□□□ -1.35
HMGB1P11-201ENST00000413899 GIPC2Q8TF65 315 aa6.63□□□□□ -1.35
HMGB1P11-201ENST00000413899 RRAGCQ9HB90 399 aa6.63□□□□□ -1.35
HMGB1P11-201ENST00000413899 PARP2Q9UGN5 583 aa6.63□□□□□ -1.35
HMGB1P11-201ENST00000413899 FAM181BA6NEQ2 426 aa6.62□□□□□ -1.35
HMGB1P11-201ENST00000413899 GNB5O14775 395 aa6.62□□□□□ -1.35
HMGB1P11-201ENST00000413899 TRPA1O75762 1119 aa6.62□□□□□ -1.35
HMGB1P11-201ENST00000413899 ZNF16P17020 682 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P11-201ENST00000413899 PTPN12Q05209 780 aaKnown RBP6.62□□□□□ -1.35
HMGB1P11-201ENST00000413899 ADAMTSL4Q6UY14 1074 aa6.62□□□□□ -1.35
HMGB1P11-201ENST00000413899 TMC4Q7Z404 712 aa6.62□□□□□ -1.35
HMGB1P11-201ENST00000413899 BSNDQ8WZ55 320 aa6.62□□□□□ -1.35
HMGB1P11-201ENST00000413899 BCO2Q9BYV7 579 aa6.62□□□□□ -1.35
HMGB1P11-201ENST00000413899 MUC3BQ9H195 1237 aa6.62□□□□□ -1.35
HMGB1P11-201ENST00000413899 ABCB6Q9NP58 842 aa6.62□□□□□ -1.35
HMGB1P11-201ENST00000413899 STK17AQ9UEE5 414 aa6.62□□□□□ -1.35
HMGB1P11-201ENST00000413899 MKL2Q9ULH7 1088 aa6.62□□□□□ -1.35
HMGB1P11-201ENST00000413899 SOX13Q9UN79 622 aa6.62□□□□□ -1.35
HMGB1P11-201ENST00000413899 TMEM238LA0A1B0GVL6 79 aa6.61□□□□□ -1.35
HMGB1P11-201ENST00000413899 XRCC5P13010 732 aaKnown RBP6.61□□□□□ -1.35
HMGB1P11-201ENST00000413899 ITPKAP23677 461 aa6.61□□□□□ -1.35
HMGB1P11-201ENST00000413899 CDC27P30260 824 aa6.61□□□□□ -1.35
HMGB1P11-201ENST00000413899 GRIA4P48058 902 aa6.61□□□□□ -1.35
HMGB1P11-201ENST00000413899 MSL1Q68DK7 614 aa6.61□□□□□ -1.35
HMGB1P11-201ENST00000413899 GDF6Q6KF10 455 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P11-201ENST00000413899 WFDC8Q8IUA0 241 aa6.61□□□□□ -1.35
HMGB1P11-201ENST00000413899 DTWD1Q8N5C7 304 aa6.61□□□□□ -1.35
HMGB1P11-201ENST00000413899 BEND7Q8N7W2 519 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P11-201ENST00000413899 TRIM11Q96F44 468 aa6.61□□□□□ -1.35
HMGB1P11-201ENST00000413899 OSBPL7Q9BZF2 842 aa6.61□□□□□ -1.35
HMGB1P11-201ENST00000413899 C12orf49Q9H741 205 aa6.61□□□□□ -1.35
HMGB1P11-201ENST00000413899 AK5Q9Y6K8 562 aa6.61□□□□□ -1.35
HMGB1P11-201ENST00000413899 A0A096LPE4 126 aa6.6□□□□□ -1.35
HMGB1P11-201ENST00000413899 A0A1W2PPZ6 126 aa6.6□□□□□ -1.35
HMGB1P11-201ENST00000413899 ITGAEP38570 1179 aa6.6□□□□□ -1.35
HMGB1P11-201ENST00000413899 NXPE4Q6UWF7 544 aa6.6□□□□□ -1.35
HMGB1P11-201ENST00000413899 VN1R5Q7Z5H4 357 aa6.6□□□□□ -1.35
HMGB1P11-201ENST00000413899 PODNQ7Z5L7 613 aa6.6□□□□□ -1.35
HMGB1P11-201ENST00000413899 IL22RA1Q8N6P7 574 aa6.6□□□□□ -1.35
HMGB1P11-201ENST00000413899 ANKRD24Q8TF21 1146 aa6.6□□□□□ -1.35
HMGB1P11-201ENST00000413899 FOXD4L4Q8WXT5 416 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P11-201ENST00000413899 SCARF2Q96GP6 870 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P11-201ENST00000413899 ZFYVE1Q9HBF4 777 aa6.6□□□□□ -1.35
HMGB1P11-201ENST00000413899 SRA1Q9HD15 236 aaKnown RBP6.6□□□□□ -1.35
HMGB1P11-201ENST00000413899 RNF19AQ9NV58 838 aa6.6□□□□□ -1.35
HMGB1P11-201ENST00000413899 PPP4R2Q9NY27 417 aa6.6□□□□□ -1.35
HMGB1P11-201ENST00000413899 METTL12A8MUP2 240 aa6.59□□□□□ -1.35
HMGB1P11-201ENST00000413899 XPCQ01831 940 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P11-201ENST00000413899 PSMD2Q13200 908 aa6.59□□□□□ -1.35
HMGB1P11-201ENST00000413899 RPS26P11Q5JNZ5 115 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P11-201ENST00000413899 C3orf58Q8NDZ4 430 aa6.59□□□□□ -1.35
HMGB1P11-201ENST00000413899 WNT8BQ93098 351 aa6.59□□□□□ -1.35
HMGB1P11-201ENST00000413899 LACRTQ9GZZ8 138 aa6.59□□□□□ -1.35
HMGB1P11-201ENST00000413899 NOP53Q9NZM5 478 aaKnown RBP6.59□□□□□ -1.35
HMGB1P11-201ENST00000413899 FAM8A1Q9UBU6 413 aa6.59□□□□□ -1.35
HMGB1P11-201ENST00000413899 PPME1Q9Y570 386 aa6.59□□□□□ -1.35
HMGB1P11-201ENST00000413899 CNTNAP5Q8WYK1 1306 aa6.58□□□□□ -1.36
HMGB1P11-201ENST00000413899 SPDYE3A6NKU9 549 aa6.58□□□□□ -1.36
HMGB1P11-201ENST00000413899 H3BRJ5 948 aa6.58□□□□□ -1.36
HMGB1P11-201ENST00000413899 EIF4BP23588 611 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms