RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 LRMPQ12912 555 aa17.59■□□□□ 0.41
TTC39A-208ENST00000413473 CCDC191Q8NCU4 936 aa17.59■□□□□ 0.41
TTC39A-208ENST00000413473 USP28Q96RU2 1077 aa17.59■□□□□ 0.41
TTC39A-208ENST00000413473 KIF3AQ9Y496 699 aa17.59■□□□□ 0.41
TTC39A-208ENST00000413473 ABCC6O95255 1503 aa17.59■□□□□ 0.41
TTC39A-208ENST00000413473 FAM177BA6PVY3 158 aa17.58■□□□□ 0.41
TTC39A-208ENST00000413473 PDIA3P30101 505 aaKnown RBP17.58■□□□□ 0.41
TTC39A-208ENST00000413473 GUCY1B3Q02153 619 aa17.58■□□□□ 0.41
TTC39A-208ENST00000413473 PLEKHG2Q9H7P9 1386 aa17.58■□□□□ 0.4
TTC39A-208ENST00000413473 M0R2C6 588 aa17.57■□□□□ 0.4
TTC39A-208ENST00000413473 FKBP4Q02790 459 aaKnown RBP eCLIP17.57■□□□□ 0.4
TTC39A-208ENST00000413473 TICAM2Q86XR7 235 aa17.57■□□□□ 0.4
TTC39A-208ENST00000413473 ZCRB1Q8TBF4 217 aaKnown RBP17.57■□□□□ 0.4
TTC39A-208ENST00000413473 GLI3P10071 1580 aa17.57■□□□□ 0.4
TTC39A-208ENST00000413473 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.57■□□□□ 0.4
TTC39A-208ENST00000413473 OSBP2Q969R2 916 aa17.57■□□□□ 0.4
TTC39A-208ENST00000413473 ZNF274Q96GC6 653 aaPredicted RBP17.57■□□□□ 0.4
TTC39A-208ENST00000413473 GOLPH3LQ9H4A5 285 aa17.57■□□□□ 0.4
TTC39A-208ENST00000413473 CEP126Q9P2H0 1117 aa17.57■□□□□ 0.4
TTC39A-208ENST00000413473 PKD1L3Q7Z443 1732 aa17.57■□□□□ 0.4
TTC39A-208ENST00000413473 CAVIN2O95810 425 aa17.56■□□□□ 0.4
TTC39A-208ENST00000413473 ZNF710Q8N1W2 664 aa17.56■□□□□ 0.4
TTC39A-208ENST00000413473 ZMYND15Q9H091 742 aa17.56■□□□□ 0.4
TTC39A-208ENST00000413473 SALL1Q9NSC2 1324 aa17.56■□□□□ 0.4
TTC39A-208ENST00000413473 TNS3Q68CZ2 1445 aa17.56■□□□□ 0.4
TTC39A-208ENST00000413473 SNW1Q13573 536 aaKnown RBP17.56■□□□□ 0.4
TTC39A-208ENST00000413473 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.56■□□□□ 0.4
TTC39A-208ENST00000413473 CIAO1O76071 339 aa17.56■□□□□ 0.4
TTC39A-208ENST00000413473 CHAF1AQ13111 956 aaPredicted RBP17.56■□□□□ 0.4
TTC39A-208ENST00000413473 IQCB1Q15051 598 aa17.56■□□□□ 0.4
TTC39A-208ENST00000413473 C11orf57Q6ZUT1 292 aaPredicted RBP17.56■□□□□ 0.4
TTC39A-208ENST00000413473 ZNF396Q96N95 335 aaPredicted RBP17.56■□□□□ 0.4
TTC39A-208ENST00000413473 GPHNQ9NQX3 736 aaPredicted RBP17.56■□□□□ 0.4
TTC39A-208ENST00000413473 ATG3Q9NT62 314 aa17.56■□□□□ 0.4
TTC39A-208ENST00000413473 SPATA31A3Q5VYP0 1347 aa17.55■□□□□ 0.4
TTC39A-208ENST00000413473 ZSCAN25Q6NSZ9 544 aa17.55■□□□□ 0.4
TTC39A-208ENST00000413473 CCDC73Q6ZRK6 1079 aa17.55■□□□□ 0.4
TTC39A-208ENST00000413473 CLIP2Q9UDT6 1046 aa17.55■□□□□ 0.4
TTC39A-208ENST00000413473 LAMB4A4D0S4 1761 aa17.55■□□□□ 0.4
TTC39A-208ENST00000413473 ERVV-2B6SEH9 535 aa17.55■□□□□ 0.4
TTC39A-208ENST00000413473 GOLGA6L19H0YKK7 550 aa17.55■□□□□ 0.4
TTC39A-208ENST00000413473 CTAGE5O15320 804 aa17.55■□□□□ 0.4
TTC39A-208ENST00000413473 TOM1L2Q6ZVM7 507 aa17.55■□□□□ 0.4
TTC39A-208ENST00000413473 ILDR1Q86SU0 546 aaPredicted RBP17.55■□□□□ 0.4
TTC39A-208ENST00000413473 PCDH11XQ9BZA7 1347 aa17.55■□□□□ 0.4
TTC39A-208ENST00000413473 PCDH11YQ9BZA8 1340 aa17.55■□□□□ 0.4
TTC39A-208ENST00000413473 RIOK3O14730 519 aaKnown RBP17.54■□□□□ 0.4
TTC39A-208ENST00000413473 FDPSP14324 419 aaKnown RBP17.54■□□□□ 0.4
TTC39A-208ENST00000413473 ME1P48163 572 aa17.54■□□□□ 0.4
TTC39A-208ENST00000413473 HAND2P61296 217 aa17.54■□□□□ 0.4
TTC39A-208ENST00000413473 CCDC57Q2TAC2 916 aa17.54■□□□□ 0.4
TTC39A-208ENST00000413473 GORABQ5T7V8 394 aa17.54■□□□□ 0.4
TTC39A-208ENST00000413473 ATL3Q6DD88 541 aa17.54■□□□□ 0.4
TTC39A-208ENST00000413473 ADORA1P30542 326 aa17.54■□□□□ 0.4
TTC39A-208ENST00000413473 WASHC4Q2M389 1173 aa17.54■□□□□ 0.4
TTC39A-208ENST00000413473 CCDC158Q5M9N0 1113 aa17.54■□□□□ 0.4
TTC39A-208ENST00000413473 ENGASEQ8NFI3 743 aa17.54■□□□□ 0.4
TTC39A-208ENST00000413473 CPDO75976 1380 aa17.53■□□□□ 0.4
TTC39A-208ENST00000413473 A0A087WWV3 80 aa17.53■□□□□ 0.4
TTC39A-208ENST00000413473 KINO60870 393 aaKnown RBP17.53■□□□□ 0.4
TTC39A-208ENST00000413473 STX1AQ16623 288 aa17.53■□□□□ 0.4
TTC39A-208ENST00000413473 CADPS2Q86UW7 1296 aa17.53■□□□□ 0.4
TTC39A-208ENST00000413473 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.53■□□□□ 0.4
TTC39A-208ENST00000413473 CCDC85AQ96PX6 553 aaPredicted RBP17.53■□□□□ 0.4
TTC39A-208ENST00000413473 CARMIL3Q8ND23 1372 aa17.53■□□□□ 0.4
TTC39A-208ENST00000413473 FAM160A1Q05DH4 1040 aa17.53■□□□□ 0.4
TTC39A-208ENST00000413473 CCDC144BQ3MJ40 725 aa17.53■□□□□ 0.4
TTC39A-208ENST00000413473 TTC39AQ5SRH9 613 aa17.53■□□□□ 0.4
TTC39A-208ENST00000413473 CCDC144CPQ8IYA2 1237 aa17.53■□□□□ 0.4
TTC39A-208ENST00000413473 FSIP1Q8NA03 581 aa17.53■□□□□ 0.4
TTC39A-208ENST00000413473 CACTINQ8WUQ7 758 aaKnown RBP17.53■□□□□ 0.4
TTC39A-208ENST00000413473 XAGE2Q96GT9 111 aa17.53■□□□□ 0.4
TTC39A-208ENST00000413473 BCL2L12Q9HB09 334 aa17.53■□□□□ 0.4
TTC39A-208ENST00000413473 ZNF330Q9Y3S2 320 aaPredicted RBP17.53■□□□□ 0.4
TTC39A-208ENST00000413473 OTUD7BQ6GQQ9 843 aa17.52■□□□□ 0.4
TTC39A-208ENST00000413473 FOXP2O15409 715 aa17.52■□□□□ 0.39
TTC39A-208ENST00000413473 PRDM11Q9NQV5 511 aa17.52■□□□□ 0.39
TTC39A-208ENST00000413473 CTNNA3Q9UI47 895 aa17.52■□□□□ 0.39
TTC39A-208ENST00000413473 MYH15Q9Y2K3 1946 aa17.52■□□□□ 0.39
TTC39A-208ENST00000413473 FGAP02671 866 aa17.51■□□□□ 0.39
TTC39A-208ENST00000413473 EVCP57679 992 aa17.51■□□□□ 0.39
TTC39A-208ENST00000413473 FBXL16Q8N461 479 aa17.51■□□□□ 0.39
TTC39A-208ENST00000413473 ERCC4Q92889 916 aaPredicted RBP17.51■□□□□ 0.39
TTC39A-208ENST00000413473 CHMP4CQ96CF2 233 aa17.51■□□□□ 0.39
TTC39A-208ENST00000413473 ISCA1Q9BUE6 129 aa17.51■□□□□ 0.39
TTC39A-208ENST00000413473 PCDHA7Q9UN72 937 aa17.51■□□□□ 0.39
TTC39A-208ENST00000413473 TJP1Q07157 1748 aa17.51■□□□□ 0.39
TTC39A-208ENST00000413473 WDR17Q8IZU2 1322 aa17.51■□□□□ 0.39
TTC39A-208ENST00000413473 BECN2A8MW95 431 aa17.51■□□□□ 0.39
TTC39A-208ENST00000413473 SCARF1Q14162 830 aa17.51■□□□□ 0.39
TTC39A-208ENST00000413473 IMMTQ16891 758 aaKnown RBP17.51■□□□□ 0.39
TTC39A-208ENST00000413473 LRRFIP1Q32MZ4 808 aaKnown RBP17.51■□□□□ 0.39
TTC39A-208ENST00000413473 SARM1Q6SZW1 724 aa17.51■□□□□ 0.39
TTC39A-208ENST00000413473 NUP188Q5SRE5 1749 aa17.51■□□□□ 0.39
TTC39A-208ENST00000413473 CDC25BP30305 580 aa17.5■□□□□ 0.39
TTC39A-208ENST00000413473 TCIRG1Q13488 830 aa17.5■□□□□ 0.39
TTC39A-208ENST00000413473 C16orf45Q96MC5 204 aaPredicted RBP17.5■□□□□ 0.39
TTC39A-208ENST00000413473 AKAP2Q9Y2D5 859 aa17.5■□□□□ 0.39
TTC39A-208ENST00000413473 HSP90AB3PQ58FF7 597 aa17.5■□□□□ 0.39
TTC39A-208ENST00000413473 FAM89AQ96GI7 184 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms