RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 DZANK1Q9NVP4 752 aa7.31□□□□□ -1.24
HMGB3P31-201ENST00000413333 PRR12Q9ULL5 1215 aa7.31□□□□□ -1.24
HMGB3P31-201ENST00000413333 PHF24Q9UPV7 400 aa7.31□□□□□ -1.24
HMGB3P31-201ENST00000413333 GRIA4P48058 902 aa7.3□□□□□ -1.24
HMGB3P31-201ENST00000413333 CTBSQ01459 385 aa7.3□□□□□ -1.24
HMGB3P31-201ENST00000413333 SPRED3Q2MJR0 410 aa7.3□□□□□ -1.24
HMGB3P31-201ENST00000413333 GMCL1Q96IK5 515 aa7.3□□□□□ -1.24
HMGB3P31-201ENST00000413333 GMLQ99445 158 aa7.3□□□□□ -1.24
HMGB3P31-201ENST00000413333 SPON2Q9BUD6 331 aa7.3□□□□□ -1.24
HMGB3P31-201ENST00000413333 PPM1HQ9ULR3 514 aa7.3□□□□□ -1.24
HMGB3P31-201ENST00000413333 LOC102724428A0A0B4J2F2 783 aa7.29□□□□□ -1.24
HMGB3P31-201ENST00000413333 POTECB2RU33 542 aa7.29□□□□□ -1.24
HMGB3P31-201ENST00000413333 GHRHP01286 108 aa7.29□□□□□ -1.24
HMGB3P31-201ENST00000413333 NRLP54845 237 aa7.29□□□□□ -1.24
HMGB3P31-201ENST00000413333 SIK1P57059 783 aa7.29□□□□□ -1.24
HMGB3P31-201ENST00000413333 PWP1Q13610 501 aa7.29□□□□□ -1.24
HMGB3P31-201ENST00000413333 LAPTM4AQ15012 233 aa7.29□□□□□ -1.24
HMGB3P31-201ENST00000413333 FOXR1Q6PIV2 292 aa7.29□□□□□ -1.24
HMGB3P31-201ENST00000413333 GPRASP2Q96D09 838 aa7.29□□□□□ -1.24
HMGB3P31-201ENST00000413333 TRERF1Q96PN7 1200 aa7.29□□□□□ -1.24
HMGB3P31-201ENST00000413333 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.29□□□□□ -1.24
HMGB3P31-201ENST00000413333 UBE2OQ9C0C9 1292 aaKnown RBP7.29□□□□□ -1.24
HMGB3P31-201ENST00000413333 GMPR2Q9P2T1 348 aaKnown RBP7.29□□□□□ -1.24
HMGB3P31-201ENST00000413333 A0A096LPE4 126 aa7.28□□□□□ -1.24
HMGB3P31-201ENST00000413333 A0A1W2PPZ6 126 aa7.28□□□□□ -1.24
HMGB3P31-201ENST00000413333 ZBTB42B2RXF5 422 aa7.28□□□□□ -1.24
HMGB3P31-201ENST00000413333 MAP3K10Q02779 954 aa7.28□□□□□ -1.24
HMGB3P31-201ENST00000413333 DPH6Q7L8W6 267 aa7.28□□□□□ -1.24
HMGB3P31-201ENST00000413333 KIAA0825Q8IV33 1275 aa7.28□□□□□ -1.24
HMGB3P31-201ENST00000413333 PMFBP1Q8TBY8 1022 aa7.28□□□□□ -1.24
HMGB3P31-201ENST00000413333 TMEM74Q96NL1 305 aa7.28□□□□□ -1.24
HMGB3P31-201ENST00000413333 RASSF4Q9H2L5 321 aa7.28□□□□□ -1.24
HMGB3P31-201ENST00000413333 ZFYVE1Q9HBF4 777 aa7.28□□□□□ -1.24
HMGB3P31-201ENST00000413333 NFKBIEO00221 500 aa7.27□□□□□ -1.25
HMGB3P31-201ENST00000413333 PDE2AO00408 941 aaPredicted RBP7.27□□□□□ -1.25
HMGB3P31-201ENST00000413333 CELA3AP09093 270 aa7.27□□□□□ -1.25
HMGB3P31-201ENST00000413333 HOXD8P13378 290 aaPredicted RBP7.27□□□□□ -1.25
HMGB3P31-201ENST00000413333 EIF4A3P38919 411 aaKnown RBP7.27□□□□□ -1.25
HMGB3P31-201ENST00000413333 GJA8P48165 433 aa7.27□□□□□ -1.25
HMGB3P31-201ENST00000413333 GPLD1P80108 840 aa7.27□□□□□ -1.25
HMGB3P31-201ENST00000413333 ATP11AP98196 1134 aa7.27□□□□□ -1.25
HMGB3P31-201ENST00000413333 FAM182BQ5T319 152 aa7.27□□□□□ -1.25
HMGB3P31-201ENST00000413333 SV2BQ7L1I2 683 aa7.27□□□□□ -1.25
HMGB3P31-201ENST00000413333 SYT9Q86SS6 491 aa7.27□□□□□ -1.25
HMGB3P31-201ENST00000413333 VWA5B2Q8N398 1253 aa7.27□□□□□ -1.25
HMGB3P31-201ENST00000413333 TMEM102Q8N9M5 508 aaPredicted RBP7.27□□□□□ -1.25
HMGB3P31-201ENST00000413333 TRPM4Q8TD43 1214 aa7.27□□□□□ -1.25
HMGB3P31-201ENST00000413333 NXPE3Q969Y0 559 aa7.27□□□□□ -1.25
HMGB3P31-201ENST00000413333 TRIM47Q96LD4 638 aa7.27□□□□□ -1.25
HMGB3P31-201ENST00000413333 RBSNQ9H1K0 784 aa7.27□□□□□ -1.25
HMGB3P31-201ENST00000413333 DNAJB12Q9NXW2 375 aaKnown RBP7.27□□□□□ -1.25
HMGB3P31-201ENST00000413333 ADAMTS1Q9UHI8 967 aa7.27□□□□□ -1.25
HMGB3P31-201ENST00000413333 GPN3Q9UHW5 284 aaPredicted RBP7.27□□□□□ -1.25
HMGB3P31-201ENST00000413333 TLR6Q9Y2C9 796 aa7.27□□□□□ -1.25
HMGB3P31-201ENST00000413333 RLBP1P12271 317 aa7.26□□□□□ -1.25
HMGB3P31-201ENST00000413333 SNRPBP14678 240 aaKnown RBP7.26□□□□□ -1.25
HMGB3P31-201ENST00000413333 ATF4P18848 351 aaPredicted RBP7.26□□□□□ -1.25
HMGB3P31-201ENST00000413333 EIF2AK2P19525 551 aaKnown RBP7.26□□□□□ -1.25
HMGB3P31-201ENST00000413333 ZNF157P51786 506 aaPredicted RBP7.26□□□□□ -1.25
HMGB3P31-201ENST00000413333 FAM160A1Q05DH4 1040 aa7.26□□□□□ -1.25
HMGB3P31-201ENST00000413333 CEP135Q66GS9 1140 aa7.26□□□□□ -1.25
HMGB3P31-201ENST00000413333 MCF2L2Q86YR7 1114 aa7.26□□□□□ -1.25
HMGB3P31-201ENST00000413333 PBX4Q9BYU1 374 aa7.26□□□□□ -1.25
HMGB3P31-201ENST00000413333 LNPKQ9C0E8 428 aa7.26□□□□□ -1.25
HMGB3P31-201ENST00000413333 CEP44Q9C0F1 390 aa7.26□□□□□ -1.25
HMGB3P31-201ENST00000413333 BHLHE41Q9C0J9 482 aaPredicted RBP7.26□□□□□ -1.25
HMGB3P31-201ENST00000413333 PPFIA3O75145 1194 aa7.25□□□□□ -1.25
HMGB3P31-201ENST00000413333 STK10O94804 968 aaKnown RBP7.25□□□□□ -1.25
HMGB3P31-201ENST00000413333 BMP4P12644 408 aa7.25□□□□□ -1.25
HMGB3P31-201ENST00000413333 CPB1P15086 417 aa7.25□□□□□ -1.25
HMGB3P31-201ENST00000413333 ITPKAP23677 461 aa7.25□□□□□ -1.25
HMGB3P31-201ENST00000413333 LIG3P49916 1009 aa7.25□□□□□ -1.25
HMGB3P31-201ENST00000413333 PCBP4P57723 403 aaKnown RBP7.25□□□□□ -1.25
HMGB3P31-201ENST00000413333 SV2AQ7L0J3 742 aa7.25□□□□□ -1.25
HMGB3P31-201ENST00000413333 MICALL1Q8N3F8 863 aa7.25□□□□□ -1.25
HMGB3P31-201ENST00000413333 ZNF296Q8WUU4 475 aaPredicted RBP7.25□□□□□ -1.25
HMGB3P31-201ENST00000413333 SEC31BQ9NQW1 1179 aa7.25□□□□□ -1.25
HMGB3P31-201ENST00000413333 SMARCA5O60264 1052 aaPredicted RBP7.24□□□□□ -1.25
HMGB3P31-201ENST00000413333 SMNDC1O75940 238 aaKnown RBP eCLIP7.24□□□□□ -1.25
HMGB3P31-201ENST00000413333 PF4P02776 101 aa7.24□□□□□ -1.25
HMGB3P31-201ENST00000413333 FGRP09769 529 aa7.24□□□□□ -1.25
HMGB3P31-201ENST00000413333 PCSK7Q16549 785 aa7.24□□□□□ -1.25
HMGB3P31-201ENST00000413333 FAM177A1Q8N128 213 aaPredicted RBP7.24□□□□□ -1.25
HMGB3P31-201ENST00000413333 PHC3Q8NDX5 983 aa7.24□□□□□ -1.25
HMGB3P31-201ENST00000413333 ANKRD24Q8TF21 1146 aa7.24□□□□□ -1.25
HMGB3P31-201ENST00000413333 ARMC5Q96C12 935 aa7.24□□□□□ -1.25
HMGB3P31-201ENST00000413333 EAF1Q96JC9 268 aaPredicted RBP7.24□□□□□ -1.25
HMGB3P31-201ENST00000413333 NECAB3Q96P71 396 aaPredicted RBP7.24□□□□□ -1.25
HMGB3P31-201ENST00000413333 POP1Q99575 1024 aaKnown RBP7.24□□□□□ -1.25
HMGB3P31-201ENST00000413333 MUC3BQ9H195 1237 aa7.24□□□□□ -1.25
HMGB3P31-201ENST00000413333 ZNF576Q9H609 170 aa7.24□□□□□ -1.25
HMGB3P31-201ENST00000413333 C2CD2LO14523 706 aa7.23□□□□□ -1.25
HMGB3P31-201ENST00000413333 ENC1O14682 589 aa7.23□□□□□ -1.25
HMGB3P31-201ENST00000413333 SSBP05455 408 aaKnown RBP eCLIP7.23□□□□□ -1.25
HMGB3P31-201ENST00000413333 LMNB1P20700 586 aa7.23□□□□□ -1.25
HMGB3P31-201ENST00000413333 NASPP49321 788 aaPredicted RBP7.23□□□□□ -1.25
HMGB3P31-201ENST00000413333 FAAP100Q0VG06 881 aa7.23□□□□□ -1.25
HMGB3P31-201ENST00000413333 ZNF468Q5VIY5 522 aaPredicted RBP7.23□□□□□ -1.25
HMGB3P31-201ENST00000413333 TTBK2Q6IQ55 1244 aa7.23□□□□□ -1.25
HMGB3P31-201ENST00000413333 FBXL19Q6PCT2 694 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms