RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ZNF790Q6PG37 636 aa20.59■□□□□ 0.89
SDCBP-202ENST00000413219 FILIP1Q7Z7B0 1213 aa20.59■□□□□ 0.89
SDCBP-202ENST00000413219 LRRC2Q9BYS8 371 aa20.59■□□□□ 0.89
SDCBP-202ENST00000413219 FAM53CQ9NYF3 392 aa20.59■□□□□ 0.89
SDCBP-202ENST00000413219 ME1P48163 572 aa20.58■□□□□ 0.89
SDCBP-202ENST00000413219 FMR1NBQ8N0W7 255 aaPredicted RBP20.58■□□□□ 0.89
SDCBP-202ENST00000413219 KRT222Q8N1A0 295 aa20.58■□□□□ 0.89
SDCBP-202ENST00000413219 AOPEPQ8N6M6 819 aa20.58■□□□□ 0.89
SDCBP-202ENST00000413219 MRPS27Q92552 414 aaKnown RBP20.58■□□□□ 0.89
SDCBP-202ENST00000413219 DBNDD2Q9BQY9 259 aa20.58■□□□□ 0.89
SDCBP-202ENST00000413219 FTOQ9C0B1 505 aaKnown RBP eCLIP20.58■□□□□ 0.895e-6■□□□□ 9.5
SDCBP-202ENST00000413219 RTEL1Q9NZ71 1219 aa20.58■□□□□ 0.89
SDCBP-202ENST00000413219 C5P01031 1676 aa20.58■□□□□ 0.89
SDCBP-202ENST00000413219 LAMA4Q16363 1823 aa20.58■□□□□ 0.89
SDCBP-202ENST00000413219 SLU7O95391 586 aaKnown RBP20.58■□□□□ 0.88
SDCBP-202ENST00000413219 TUBB4AP04350 444 aa20.58■□□□□ 0.88
SDCBP-202ENST00000413219 APOBRQ0VD83 1088 aa20.58■□□□□ 0.88
SDCBP-202ENST00000413219 ADALQ6DHV7 355 aa20.58■□□□□ 0.88
SDCBP-202ENST00000413219 COPS6Q7L5N1 327 aa20.58■□□□□ 0.88
SDCBP-202ENST00000413219 CCDC150Q8NCX0 1101 aa20.58■□□□□ 0.88
SDCBP-202ENST00000413219 GCP02774 474 aa20.57■□□□□ 0.88
SDCBP-202ENST00000413219 FBXL16Q8N461 479 aa20.57■□□□□ 0.88
SDCBP-202ENST00000413219 KMT5BQ4FZB7 885 aa20.57■□□□□ 0.88
SDCBP-202ENST00000413219 ANKRD13DQ6ZTN6 518 aa20.57■□□□□ 0.88
SDCBP-202ENST00000413219 ILDR1Q86SU0 546 aaPredicted RBP20.57■□□□□ 0.88
SDCBP-202ENST00000413219 FAM193AP78312 1265 aa20.56■□□□□ 0.88
SDCBP-202ENST00000413219 DDX46Q7L014 1031 aaKnown RBP20.56■□□□□ 0.88
SDCBP-202ENST00000413219 NBPF11Q86T75 865 aa20.56■□□□□ 0.88
SDCBP-202ENST00000413219 PSDA5PKW4 1024 aaPredicted RBP20.55■□□□□ 0.88
SDCBP-202ENST00000413219 MYL6BP14649 208 aa20.55■□□□□ 0.88
SDCBP-202ENST00000413219 ZNF771Q7L3S4 317 aaPredicted RBP20.55■□□□□ 0.88
SDCBP-202ENST00000413219 PCDHA7Q9UN72 937 aa20.55■□□□□ 0.88
SDCBP-202ENST00000413219 CARMIL3Q8ND23 1372 aa20.55■□□□□ 0.88
SDCBP-202ENST00000413219 SLFN14P0C7P3 912 aa20.55■□□□□ 0.88
SDCBP-202ENST00000413219 PDIA3P30101 505 aaKnown RBP20.55■□□□□ 0.88
SDCBP-202ENST00000413219 ZMYM1Q5SVZ6 1142 aa20.55■□□□□ 0.88
SDCBP-202ENST00000413219 LRP10Q7Z4F1 713 aa20.55■□□□□ 0.88
SDCBP-202ENST00000413219 L2HGDHQ9H9P8 463 aa20.55■□□□□ 0.88
SDCBP-202ENST00000413219 SLC52A2Q9HAB3 445 aa20.55■□□□□ 0.88
SDCBP-202ENST00000413219 GPR108Q9NPR9 543 aa20.55■□□□□ 0.88
SDCBP-202ENST00000413219 NDUFB9Q9Y6M9 179 aa20.55■□□□□ 0.88
SDCBP-202ENST00000413219 E7EWF7 191 aa20.54■□□□□ 0.88
SDCBP-202ENST00000413219 CHGBP05060 677 aa20.54■□□□□ 0.88
SDCBP-202ENST00000413219 EVCP57679 992 aa20.54■□□□□ 0.88
SDCBP-202ENST00000413219 SDF4Q9BRK5 362 aa20.54■□□□□ 0.88
SDCBP-202ENST00000413219 TRMT1Q9NXH9 659 aaKnown RBP20.54■□□□□ 0.88
SDCBP-202ENST00000413219 KIAA1468Q9P260 1216 aa20.54■□□□□ 0.88
SDCBP-202ENST00000413219 YEATS4O95619 227 aa20.54■□□□□ 0.88
SDCBP-202ENST00000413219 CCT2P78371 535 aaKnown RBP20.54■□□□□ 0.88
SDCBP-202ENST00000413219 KCNG4Q8TDN1 519 aa20.54■□□□□ 0.88
SDCBP-202ENST00000413219 FOSBP53539 338 aa20.53■□□□□ 0.88
SDCBP-202ENST00000413219 TPM4P67936 248 aa20.53■□□□□ 0.88
SDCBP-202ENST00000413219 ZRSR1Q15695 479 aaKnown RBP20.53■□□□□ 0.88
SDCBP-202ENST00000413219 ESCO1Q5FWF5 840 aa20.53■□□□□ 0.88
SDCBP-202ENST00000413219 PAG1Q9NWQ8 432 aa20.53■□□□□ 0.88
SDCBP-202ENST00000413219 ERBB3P21860 1342 aa20.53■□□□□ 0.88
SDCBP-202ENST00000413219 TMEM94Q12767 1356 aa20.52■□□□□ 0.88
SDCBP-202ENST00000413219 NRDCO43847 1150 aa20.52■□□□□ 0.88
SDCBP-202ENST00000413219 FBXO38Q6PIJ6 1188 aa20.52■□□□□ 0.88
SDCBP-202ENST00000413219 UBE3BQ7Z3V4 1068 aa20.52■□□□□ 0.88
SDCBP-202ENST00000413219 CREBRFQ8IUR6 639 aa20.52■□□□□ 0.88
SDCBP-202ENST00000413219 LINC00301Q8NCQ3 95 aa20.52■□□□□ 0.88
SDCBP-202ENST00000413219 CASP7P55210 303 aa20.52■□□□□ 0.87
SDCBP-202ENST00000413219 TERF2Q15554 542 aa20.52■□□□□ 0.87
SDCBP-202ENST00000413219 ELF2Q15723 593 aa20.52■□□□□ 0.87
SDCBP-202ENST00000413219 NCOA5Q9HCD5 579 aaKnown RBP20.52■□□□□ 0.87
SDCBP-202ENST00000413219 POLR3EQ9NVU0 708 aa20.52■□□□□ 0.87
SDCBP-202ENST00000413219 SCN11AQ9UI33 1791 aa20.51■□□□□ 0.87
SDCBP-202ENST00000413219 KDM6AO15550 1401 aaPredicted RBP20.51■□□□□ 0.87
SDCBP-202ENST00000413219 HSPD1P10809 573 aaKnown RBP20.51■□□□□ 0.87
SDCBP-202ENST00000413219 SLC39A6Q13433 755 aa20.51■□□□□ 0.87
SDCBP-202ENST00000413219 E4F1Q66K89 784 aaPredicted RBP20.51■□□□□ 0.87
SDCBP-202ENST00000413219 RGS22Q8NE09 1264 aa20.51■□□□□ 0.87
SDCBP-202ENST00000413219 A0A087WWV3 80 aa20.5■□□□□ 0.87
SDCBP-202ENST00000413219 FDPSP14324 419 aaKnown RBP20.5■□□□□ 0.87
SDCBP-202ENST00000413219 PPP1R13BQ96KQ4 1090 aa20.5■□□□□ 0.87
SDCBP-202ENST00000413219 AFDNP55196 1824 aaKnown RBP20.5■□□□□ 0.87
SDCBP-202ENST00000413219 GOLIM4O00461 696 aa20.5■□□□□ 0.87
SDCBP-202ENST00000413219 IGSF3O75054 1194 aa20.5■□□□□ 0.87
SDCBP-202ENST00000413219 SNRPA1P09661 255 aaKnown RBP20.5■□□□□ 0.87
SDCBP-202ENST00000413219 SFPQP23246 707 aaKnown RBP eCLIP20.5■□□□□ 0.87
SDCBP-202ENST00000413219 NDUFA8P51970 172 aa20.5■□□□□ 0.87
SDCBP-202ENST00000413219 NLRP12P59046 1061 aa20.5■□□□□ 0.87
SDCBP-202ENST00000413219 GUCY1B3Q02153 619 aa20.5■□□□□ 0.87
SDCBP-202ENST00000413219 STK38Q15208 465 aa20.5■□□□□ 0.87
SDCBP-202ENST00000413219 BRAPQ7Z569 592 aa20.5■□□□□ 0.87
SDCBP-202ENST00000413219 XPO4Q9C0E2 1151 aaKnown RBP20.5■□□□□ 0.87
SDCBP-202ENST00000413219 SPEF2Q9C093 1822 aa20.49■□□□□ 0.87
SDCBP-202ENST00000413219 NEDD4P46934 1319 aa20.49■□□□□ 0.87
SDCBP-202ENST00000413219 FER1L4A9Z1Z3 1794 aa20.49■□□□□ 0.87
SDCBP-202ENST00000413219 A0A087WZG4 1122 aa20.49■□□□□ 0.87
SDCBP-202ENST00000413219 A0A1B0GVL5 298 aa20.49■□□□□ 0.87
SDCBP-202ENST00000413219 CCP110O43303 1012 aa20.49■□□□□ 0.87
SDCBP-202ENST00000413219 DPCR1Q3MIW9 517 aa20.49■□□□□ 0.87
SDCBP-202ENST00000413219 CCDC93Q567U6 631 aa20.49■□□□□ 0.87
SDCBP-202ENST00000413219 H2AFXP16104 143 aaPredicted RBP20.49■□□□□ 0.87
SDCBP-202ENST00000413219 SF3A1Q15459 793 aaKnown RBP20.49■□□□□ 0.87
SDCBP-202ENST00000413219 ARMCX5Q6P1M9 558 aa20.49■□□□□ 0.87
SDCBP-202ENST00000413219 ZNF496Q96IT1 587 aaPredicted RBP20.49■□□□□ 0.87
SDCBP-202ENST00000413219 IFNKQ9P0W0 207 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms