RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 TBC1D2Q9BYX2 928 aa11.72□□□□□ -0.53
SMPD4-203ENST00000412570 PIH1D3Q9NQM4 214 aaKnown RBP11.72□□□□□ -0.53
SMPD4-203ENST00000412570 INCENPQ9NQS7 918 aa11.72□□□□□ -0.53
SMPD4-203ENST00000412570 CACNA1FO60840 1977 aa11.72□□□□□ -0.53
SMPD4-203ENST00000412570 SALL3Q9BXA9 1300 aa11.72□□□□□ -0.53
SMPD4-203ENST00000412570 PUM3Q15397 648 aaKnown RBP11.72□□□□□ -0.53
SMPD4-203ENST00000412570 HSCBQ8IWL3 235 aa11.72□□□□□ -0.53
SMPD4-203ENST00000412570 RASEFQ8IZ41 740 aa11.72□□□□□ -0.53
SMPD4-203ENST00000412570 MAGEB6Q8N7X4 407 aa11.72□□□□□ -0.53
SMPD4-203ENST00000412570 SCAF8Q9UPN6 1271 aaKnown RBP11.72□□□□□ -0.53
SMPD4-203ENST00000412570 RRP12Q5JTH9 1297 aaKnown RBP11.71□□□□□ -0.53
SMPD4-203ENST00000412570 USP26Q9BXU7 913 aa11.71□□□□□ -0.53
SMPD4-203ENST00000412570 SSFA2P28290 1259 aa11.71□□□□□ -0.54
SMPD4-203ENST00000412570 C2CD5Q86YS7 1000 aa11.71□□□□□ -0.54
SMPD4-203ENST00000412570 POLRMTO00411 1230 aaKnown RBP11.71□□□□□ -0.54
SMPD4-203ENST00000412570 STAP2Q9UGK3 403 aa11.71□□□□□ -0.54
SMPD4-203ENST00000412570 CDHR2Q9BYE9 1310 aa11.7□□□□□ -0.54
SMPD4-203ENST00000412570 CYP2E1P05181 493 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-203ENST00000412570 JAKMIP1Q96N16 626 aaKnown RBP11.7□□□□□ -0.54
SMPD4-203ENST00000412570 CAMKK2Q96RR4 588 aa11.7□□□□□ -0.54
SMPD4-203ENST00000412570 DBNDD1Q9H9R9 158 aa11.7□□□□□ -0.54
SMPD4-203ENST00000412570 HMG20BQ9P0W2 317 aa11.7□□□□□ -0.54
SMPD4-203ENST00000412570 TJP1Q07157 1748 aa11.7□□□□□ -0.54
SMPD4-203ENST00000412570 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.7□□□□□ -0.54
SMPD4-203ENST00000412570 C21orf2O43822 256 aa11.7□□□□□ -0.54
SMPD4-203ENST00000412570 ADCK5Q3MIX3 580 aa11.7□□□□□ -0.54
SMPD4-203ENST00000412570 CHAMP1Q96JM3 812 aa11.7□□□□□ -0.54
SMPD4-203ENST00000412570 PUS7LQ9H0K6 701 aaKnown RBP11.7□□□□□ -0.54
SMPD4-203ENST00000412570 UBR2Q8IWV8 1755 aa11.7□□□□□ -0.54
SMPD4-203ENST00000412570 SMIM22K7EJ46 135 aa11.69□□□□□ -0.54
SMPD4-203ENST00000412570 CASTP20810 708 aaKnown RBP11.69□□□□□ -0.54
SMPD4-203ENST00000412570 CAVIN4Q5BKX8 364 aa11.69□□□□□ -0.54
SMPD4-203ENST00000412570 NLGN1Q8N2Q7 840 aa11.69□□□□□ -0.54
SMPD4-203ENST00000412570 ARMT1Q9H993 441 aa11.69□□□□□ -0.54
SMPD4-203ENST00000412570 TTC41PQ6P2S7 1318 aa11.69□□□□□ -0.54
SMPD4-203ENST00000412570 M0R2C6 588 aa11.69□□□□□ -0.54
SMPD4-203ENST00000412570 PLSCR1O15162 318 aa11.69□□□□□ -0.54
SMPD4-203ENST00000412570 PRKAB2O43741 272 aa11.69□□□□□ -0.54
SMPD4-203ENST00000412570 ATP5JP18859 108 aa11.69□□□□□ -0.54
SMPD4-203ENST00000412570 GPSM2P81274 684 aa11.69□□□□□ -0.54
SMPD4-203ENST00000412570 LPIN2Q92539 896 aa11.69□□□□□ -0.54
SMPD4-203ENST00000412570 RBM8AQ9Y5S9 174 aaKnown RBP11.69□□□□□ -0.54
SMPD4-203ENST00000412570 NUP98P52948 1817 aa11.69□□□□□ -0.54
SMPD4-203ENST00000412570 SPATA5Q8NB90 893 aa11.69□□□□□ -0.54
SMPD4-203ENST00000412570 OSBP2Q969R2 916 aa11.69□□□□□ -0.54
SMPD4-203ENST00000412570 KCNQ5Q9NR82 932 aa11.69□□□□□ -0.54
SMPD4-203ENST00000412570 DIXDC1Q155Q3 683 aa11.68□□□□□ -0.54
SMPD4-203ENST00000412570 AKT1S1Q96B36 256 aa11.68□□□□□ -0.54
SMPD4-203ENST00000412570 COL4A1P02462 1669 aa11.68□□□□□ -0.54
SMPD4-203ENST00000412570 MINDY4BA8MYZ0 360 aa11.68□□□□□ -0.54
SMPD4-203ENST00000412570 BECN1Q14457 450 aa11.68□□□□□ -0.54
SMPD4-203ENST00000412570 SDR42E1Q8WUS8 393 aa11.68□□□□□ -0.54
SMPD4-203ENST00000412570 TMX4Q9H1E5 349 aaPredicted RBP11.68□□□□□ -0.54
SMPD4-203ENST00000412570 OSBPL3Q9H4L5 887 aa11.68□□□□□ -0.54
SMPD4-203ENST00000412570 SGSM2O43147 1006 aa11.68□□□□□ -0.54
SMPD4-203ENST00000412570 MCCP23508 829 aa11.68□□□□□ -0.54
SMPD4-203ENST00000412570 PRDX5P30044 214 aa11.68□□□□□ -0.54
SMPD4-203ENST00000412570 DENND2AQ9ULE3 1009 aa11.68□□□□□ -0.54
SMPD4-203ENST00000412570 ZNF532Q9HCE3 1301 aa11.68□□□□□ -0.54
SMPD4-203ENST00000412570 RUFY2Q8WXA3 655 aa11.67□□□□□ -0.54
SMPD4-203ENST00000412570 HAUS7Q99871 368 aa11.67□□□□□ -0.54
SMPD4-203ENST00000412570 ZNF804BA4D1E1 1349 aa11.67□□□□□ -0.54
SMPD4-203ENST00000412570 CYP2D7A0A087X1C5 515 aa11.67□□□□□ -0.54
SMPD4-203ENST00000412570 SCNN1DP51172 638 aa11.67□□□□□ -0.54
SMPD4-203ENST00000412570 DYNLL1P63167 89 aaKnown RBP11.67□□□□□ -0.54
SMPD4-203ENST00000412570 DDRGK1Q96HY6 314 aa11.67□□□□□ -0.54
SMPD4-203ENST00000412570 PLA2G12BQ9BX93 195 aa11.67□□□□□ -0.54
SMPD4-203ENST00000412570 THSD7AQ9UPZ6 1657 aa11.67□□□□□ -0.54
SMPD4-203ENST00000412570 LAMB4A4D0S4 1761 aa11.67□□□□□ -0.54
SMPD4-203ENST00000412570 HSP90B1P14625 803 aaKnown RBP11.67□□□□□ -0.54
SMPD4-203ENST00000412570 CYP7A1P22680 504 aa11.67□□□□□ -0.54
SMPD4-203ENST00000412570 GRIK5Q16478 980 aa11.67□□□□□ -0.54
SMPD4-203ENST00000412570 KBTBD3Q8NAB2 608 aa11.67□□□□□ -0.54
SMPD4-203ENST00000412570 WNK3Q9BYP7 1800 aa11.66□□□□□ -0.54
SMPD4-203ENST00000412570 PRDM1O75626 825 aa11.66□□□□□ -0.54
SMPD4-203ENST00000412570 HIBADHP31937 336 aaKnown RBP11.66□□□□□ -0.54
SMPD4-203ENST00000412570 RBM5P52756 815 aaKnown RBP eCLIP11.66□□□□□ -0.54
SMPD4-203ENST00000412570 NECAB1Q8N987 351 aa11.66□□□□□ -0.54
SMPD4-203ENST00000412570 AIDAQ96BJ3 306 aa11.66□□□□□ -0.54
SMPD4-203ENST00000412570 FAM84BQ96KN1 310 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-203ENST00000412570 MROH5Q6ZUA9 1318 aa11.66□□□□□ -0.54
SMPD4-203ENST00000412570 CIAO1O76071 339 aa11.66□□□□□ -0.54
SMPD4-203ENST00000412570 MBD4O95243 580 aa11.66□□□□□ -0.54
SMPD4-203ENST00000412570 TM4SF1P30408 202 aa11.66□□□□□ -0.54
SMPD4-203ENST00000412570 GTF2IP78347 998 aa11.66□□□□□ -0.54
SMPD4-203ENST00000412570 EVX2Q03828 476 aa11.66□□□□□ -0.54
SMPD4-203ENST00000412570 RBM17Q96I25 401 aaKnown RBP11.66□□□□□ -0.54
SMPD4-203ENST00000412570 AATFQ9NY61 560 aaKnown RBP eCLIP11.66□□□□□ -0.54
SMPD4-203ENST00000412570 RIC1Q4ADV7 1423 aa11.66□□□□□ -0.54
SMPD4-203ENST00000412570 H0YIN7 160 aa11.66□□□□□ -0.54
SMPD4-203ENST00000412570 GRAPQ13588 217 aa11.66□□□□□ -0.54
SMPD4-203ENST00000412570 GRAPLQ8TC17 118 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-203ENST00000412570 BSDC1Q9NW68 430 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-203ENST00000412570 PPEF1O14829 653 aaPredicted RBP11.65□□□□□ -0.54
SMPD4-203ENST00000412570 CCDC144CPQ8IYA2 1237 aa11.65□□□□□ -0.54
SMPD4-203ENST00000412570 ZGPATQ8N5A5 531 aaKnown RBP11.65□□□□□ -0.54
SMPD4-203ENST00000412570 VGLL2Q8N8G2 317 aa11.65□□□□□ -0.54
SMPD4-203ENST00000412570 ZKSCAN3Q9BRR0 538 aa11.65□□□□□ -0.54
SMPD4-203ENST00000412570 GPHNQ9NQX3 736 aaPredicted RBP11.65□□□□□ -0.54
SMPD4-203ENST00000412570 BCS1LQ9Y276 419 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms