RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 INTS3Q68E01 1043 aaKnown RBP23.64■■□□□ 1.37
TRIM56-202ENST00000412507 PASKQ96RG2 1323 aa23.63■■□□□ 1.37
TRIM56-202ENST00000412507 H7C1D1 291 aa23.63■■□□□ 1.37
TRIM56-202ENST00000412507 CNTROBQ8N137 903 aa23.63■■□□□ 1.37
TRIM56-202ENST00000412507 KLHDC4Q8TBB5 520 aa23.63■■□□□ 1.37
TRIM56-202ENST00000412507 TRPM4Q8TD43 1214 aa23.63■■□□□ 1.37
TRIM56-202ENST00000412507 COA1Q9GZY4 146 aa23.63■■□□□ 1.37
TRIM56-202ENST00000412507 IRS2Q9Y4H2 1338 aa23.62■■□□□ 1.37
TRIM56-202ENST00000412507 USP17L3A6NCW0 530 aa23.62■■□□□ 1.37
TRIM56-202ENST00000412507 USP17L4A6NCW7 530 aa23.62■■□□□ 1.37
TRIM56-202ENST00000412507 HIRAP54198 1017 aaPredicted RBP23.62■■□□□ 1.37
TRIM56-202ENST00000412507 RSBN1LQ6PCB5 846 aaPredicted RBP23.62■■□□□ 1.37
TRIM56-202ENST00000412507 USP17L1Q7RTZ2 530 aa23.62■■□□□ 1.37
TRIM56-202ENST00000412507 CLUAP1Q96AJ1 413 aa23.62■■□□□ 1.37
TRIM56-202ENST00000412507 MEIS3Q99687 375 aa23.62■■□□□ 1.37
TRIM56-202ENST00000412507 LRRC24Q50LG9 513 aa23.61■■□□□ 1.37
TRIM56-202ENST00000412507 ZKSCAN2Q63HK3 967 aa23.61■■□□□ 1.37
TRIM56-202ENST00000412507 SAMD7Q7Z3H4 446 aa23.61■■□□□ 1.37
TRIM56-202ENST00000412507 RIPOR2Q9Y4F9 1068 aa23.61■■□□□ 1.37
TRIM56-202ENST00000412507 LRRFIP2Q9Y608 721 aaKnown RBP23.61■■□□□ 1.37
TRIM56-202ENST00000412507 MYH13Q9UKX3 1938 aa23.61■■□□□ 1.37
TRIM56-202ENST00000412507 C15orf52Q6ZUT6 534 aaKnown RBP23.6■■□□□ 1.37
TRIM56-202ENST00000412507 DNAJC5GQ8N7S2 189 aa23.6■■□□□ 1.37
TRIM56-202ENST00000412507 FBXW7Q969H0 707 aa23.6■■□□□ 1.37
TRIM56-202ENST00000412507 ZNF609O15014 1411 aa23.59■■□□□ 1.37
TRIM56-202ENST00000412507 RFX5P48382 616 aaPredicted RBP23.59■■□□□ 1.37
TRIM56-202ENST00000412507 TBC1D10BQ4KMP7 808 aaPredicted RBP23.59■■□□□ 1.37
TRIM56-202ENST00000412507 AGBL3Q8NEM8 1001 aa23.59■■□□□ 1.37
TRIM56-202ENST00000412507 MROH5Q6ZUA9 1318 aa23.59■■□□□ 1.37
TRIM56-202ENST00000412507 EGFRP00533 1210 aa23.58■■□□□ 1.37
TRIM56-202ENST00000412507 RBM26Q5T8P6 1007 aaKnown RBP23.58■■□□□ 1.37
TRIM56-202ENST00000412507 MXD3Q9BW11 206 aa23.58■■□□□ 1.37
TRIM56-202ENST00000412507 CD209Q9NNX6 404 aa23.58■■□□□ 1.37
TRIM56-202ENST00000412507 HDAC5Q9UQL6 1122 aa23.58■■□□□ 1.37
TRIM56-202ENST00000412507 UBE4AQ14139 1066 aa23.57■■□□□ 1.36
TRIM56-202ENST00000412507 DACT2Q5SW24 774 aa23.57■■□□□ 1.36
TRIM56-202ENST00000412507 GMLQ99445 158 aa23.57■■□□□ 1.36
TRIM56-202ENST00000412507 GNAI3P08754 354 aa23.56■■□□□ 1.36
TRIM56-202ENST00000412507 FMR1Q06787 632 aaKnown RBP eCLIP23.56■■□□□ 1.361e-6■■■□□ 17.6
TRIM56-202ENST00000412507 METTL24Q5JXM2 366 aa23.56■■□□□ 1.36
TRIM56-202ENST00000412507 STRIP1Q5VSL9 837 aa23.56■■□□□ 1.36
TRIM56-202ENST00000412507 TTLL5Q6EMB2 1281 aa23.56■■□□□ 1.36
TRIM56-202ENST00000412507 ZNF804AQ7Z570 1209 aa23.56■■□□□ 1.36
TRIM56-202ENST00000412507 TMEM57Q8N5G2 664 aa23.56■■□□□ 1.36
TRIM56-202ENST00000412507 PGAP2Q9UHJ9 254 aa23.56■■□□□ 1.36
TRIM56-202ENST00000412507 GTF2IP78347 998 aa23.55■■□□□ 1.36
TRIM56-202ENST00000412507 PTPN12Q05209 780 aaKnown RBP23.55■■□□□ 1.36
TRIM56-202ENST00000412507 ZC3H15Q8WU90 426 aaKnown RBP23.55■■□□□ 1.36
TRIM56-202ENST00000412507 CREBZFQ9NS37 354 aa23.55■■□□□ 1.36
TRIM56-202ENST00000412507 EYA2O00167 538 aa23.54■■□□□ 1.36
TRIM56-202ENST00000412507 TRAF5O00463 557 aa23.54■■□□□ 1.36
TRIM56-202ENST00000412507 KIF4BQ2VIQ3 1234 aa23.54■■□□□ 1.36
TRIM56-202ENST00000412507 KLRG1Q96E93 195 aa23.54■■□□□ 1.36
TRIM56-202ENST00000412507 ECM29Q5VYK3 1845 aa23.54■■□□□ 1.36
TRIM56-202ENST00000412507 ARAP2Q8WZ64 1704 aa23.53■■□□□ 1.36
TRIM56-202ENST00000412507 TMEM88BA6NKF7 163 aa23.53■■□□□ 1.36
TRIM56-202ENST00000412507 PDE8BO95263 885 aa23.53■■□□□ 1.36
TRIM56-202ENST00000412507 USP17L8P0C7I0 530 aa23.53■■□□□ 1.36
TRIM56-202ENST00000412507 IL1R1P14778 569 aa23.53■■□□□ 1.36
TRIM56-202ENST00000412507 ZNF280AP59817 542 aaPredicted RBP23.53■■□□□ 1.36
TRIM56-202ENST00000412507 VGLL2Q8N8G2 317 aa23.53■■□□□ 1.36
TRIM56-202ENST00000412507 GLIS2Q9BZE0 524 aaPredicted RBP23.53■■□□□ 1.36
TRIM56-202ENST00000412507 GYG1P46976 350 aa23.52■■□□□ 1.36
TRIM56-202ENST00000412507 SIL1Q9H173 461 aa23.52■■□□□ 1.36
TRIM56-202ENST00000412507 MYO3BQ8WXR4 1341 aa23.52■■□□□ 1.36
TRIM56-202ENST00000412507 ATG9AQ7Z3C6 839 aa23.51■■□□□ 1.35
TRIM56-202ENST00000412507 FTSJ3Q8IY81 847 aaKnown RBP23.51■■□□□ 1.35
TRIM56-202ENST00000412507 DZIP1LQ8IYY4 767 aaKnown RBP23.51■■□□□ 1.35
TRIM56-202ENST00000412507 FAM84BQ96KN1 310 aaPredicted RBP23.51■■□□□ 1.35
TRIM56-202ENST00000412507 MYOZ2Q9NPC6 264 aa23.51■■□□□ 1.35
TRIM56-202ENST00000412507 PA2G4Q9UQ80 394 aaKnown RBP23.51■■□□□ 1.35
TRIM56-202ENST00000412507 RLBP1P12271 317 aa23.5■■□□□ 1.35
TRIM56-202ENST00000412507 HIBADHP31937 336 aaKnown RBP23.5■■□□□ 1.35
TRIM56-202ENST00000412507 GNAI2P04899 355 aa23.49■■□□□ 1.35
TRIM56-202ENST00000412507 CDC37L1Q7L3B6 337 aa23.49■■□□□ 1.35
TRIM56-202ENST00000412507 USP48Q86UV5 1035 aa23.49■■□□□ 1.35
TRIM56-202ENST00000412507 JAG2Q9Y219 1238 aa23.49■■□□□ 1.35
TRIM56-202ENST00000412507 ASTN2O75129 1339 aaPredicted RBP23.49■■□□□ 1.35
TRIM56-202ENST00000412507 SRGAP3O43295 1099 aa23.48■■□□□ 1.35
TRIM56-202ENST00000412507 SCARF1Q14162 830 aa23.48■■□□□ 1.35
TRIM56-202ENST00000412507 KIAA0825Q8IV33 1275 aa23.48■■□□□ 1.35
TRIM56-202ENST00000412507 OGFOD1Q8N543 542 aa23.48■■□□□ 1.35
TRIM56-202ENST00000412507 CERS5Q8N5B7 392 aa23.48■■□□□ 1.35
TRIM56-202ENST00000412507 TDRD7Q8NHU6 1098 aaKnown RBP23.48■■□□□ 1.35
TRIM56-202ENST00000412507 MKRN1Q9UHC7 482 aaKnown RBP23.48■■□□□ 1.35
TRIM56-202ENST00000412507 FBXO3Q9UK99 471 aa23.48■■□□□ 1.35
TRIM56-202ENST00000412507 CIAO1O76071 339 aa23.47■■□□□ 1.35
TRIM56-202ENST00000412507 MTX1Q13505 466 aa23.47■■□□□ 1.35
TRIM56-202ENST00000412507 ITPRIPQ8IWB1 547 aa23.47■■□□□ 1.35
TRIM56-202ENST00000412507 DCPSQ96C86 337 aaKnown RBP23.47■■□□□ 1.35
TRIM56-202ENST00000412507 COPRSQ9NQ92 184 aa23.47■■□□□ 1.35
TRIM56-202ENST00000412507 GGA3Q9NZ52 723 aa23.47■■□□□ 1.35
TRIM56-202ENST00000412507 SASH1O94885 1247 aa23.46■■□□□ 1.35
TRIM56-202ENST00000412507 FGFR2P21802 821 aa23.46■■□□□ 1.35
TRIM56-202ENST00000412507 PUM3Q15397 648 aaKnown RBP23.46■■□□□ 1.35
TRIM56-202ENST00000412507 CST9Q5W186 159 aa23.46■■□□□ 1.35
TRIM56-202ENST00000412507 DLK2Q6UY11 383 aa23.46■■□□□ 1.35
TRIM56-202ENST00000412507 KRT26Q7Z3Y9 468 aa23.46■■□□□ 1.35
TRIM56-202ENST00000412507 FBXO33Q7Z6M2 555 aa23.46■■□□□ 1.35
TRIM56-202ENST00000412507 FAM205AQ6ZU69 1335 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms