RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 INTS3Q68E01 1043 aaKnown RBP23.64■■□□□ 1.37
TRIM56-202ENST00000412507 PASKQ96RG2 1323 aa23.63■■□□□ 1.37
TRIM56-202ENST00000412507 H7C1D1 291 aa23.63■■□□□ 1.37
TRIM56-202ENST00000412507 CNTROBQ8N137 903 aa23.63■■□□□ 1.37
TRIM56-202ENST00000412507 KLHDC4Q8TBB5 520 aa23.63■■□□□ 1.37
TRIM56-202ENST00000412507 TRPM4Q8TD43 1214 aa23.63■■□□□ 1.37
TRIM56-202ENST00000412507 COA1Q9GZY4 146 aa23.63■■□□□ 1.37
TRIM56-202ENST00000412507 IRS2Q9Y4H2 1338 aa23.62■■□□□ 1.37
TRIM56-202ENST00000412507 USP17L3A6NCW0 530 aa23.62■■□□□ 1.37
TRIM56-202ENST00000412507 USP17L4A6NCW7 530 aa23.62■■□□□ 1.37
TRIM56-202ENST00000412507 HIRAP54198 1017 aaPredicted RBP23.62■■□□□ 1.37
TRIM56-202ENST00000412507 RSBN1LQ6PCB5 846 aaPredicted RBP23.62■■□□□ 1.37
TRIM56-202ENST00000412507 USP17L1Q7RTZ2 530 aa23.62■■□□□ 1.37
TRIM56-202ENST00000412507 CLUAP1Q96AJ1 413 aa23.62■■□□□ 1.37
TRIM56-202ENST00000412507 MEIS3Q99687 375 aa23.62■■□□□ 1.37
TRIM56-202ENST00000412507 LRRC24Q50LG9 513 aa23.61■■□□□ 1.37
TRIM56-202ENST00000412507 ZKSCAN2Q63HK3 967 aa23.61■■□□□ 1.37
TRIM56-202ENST00000412507 SAMD7Q7Z3H4 446 aa23.61■■□□□ 1.37
TRIM56-202ENST00000412507 RIPOR2Q9Y4F9 1068 aa23.61■■□□□ 1.37
TRIM56-202ENST00000412507 LRRFIP2Q9Y608 721 aaKnown RBP23.61■■□□□ 1.37
TRIM56-202ENST00000412507 MYH13Q9UKX3 1938 aa23.61■■□□□ 1.37
TRIM56-202ENST00000412507 C15orf52Q6ZUT6 534 aaKnown RBP23.6■■□□□ 1.37
TRIM56-202ENST00000412507 DNAJC5GQ8N7S2 189 aa23.6■■□□□ 1.37
TRIM56-202ENST00000412507 FBXW7Q969H0 707 aa23.6■■□□□ 1.37
TRIM56-202ENST00000412507 ZNF609O15014 1411 aa23.59■■□□□ 1.37
TRIM56-202ENST00000412507 RFX5P48382 616 aaPredicted RBP23.59■■□□□ 1.37
TRIM56-202ENST00000412507 TBC1D10BQ4KMP7 808 aaPredicted RBP23.59■■□□□ 1.37
TRIM56-202ENST00000412507 AGBL3Q8NEM8 1001 aa23.59■■□□□ 1.37
TRIM56-202ENST00000412507 MROH5Q6ZUA9 1318 aa23.59■■□□□ 1.37
TRIM56-202ENST00000412507 EGFRP00533 1210 aa23.58■■□□□ 1.37
TRIM56-202ENST00000412507 RBM26Q5T8P6 1007 aaKnown RBP23.58■■□□□ 1.37
TRIM56-202ENST00000412507 MXD3Q9BW11 206 aa23.58■■□□□ 1.37
TRIM56-202ENST00000412507 CD209Q9NNX6 404 aa23.58■■□□□ 1.37
TRIM56-202ENST00000412507 HDAC5Q9UQL6 1122 aa23.58■■□□□ 1.37
TRIM56-202ENST00000412507 UBE4AQ14139 1066 aa23.57■■□□□ 1.36
TRIM56-202ENST00000412507 DACT2Q5SW24 774 aa23.57■■□□□ 1.36
TRIM56-202ENST00000412507 GMLQ99445 158 aa23.57■■□□□ 1.36
TRIM56-202ENST00000412507 GNAI3P08754 354 aa23.56■■□□□ 1.36
TRIM56-202ENST00000412507 FMR1Q06787 632 aaKnown RBP eCLIP23.56■■□□□ 1.361e-6■■■□□ 17.6
TRIM56-202ENST00000412507 METTL24Q5JXM2 366 aa23.56■■□□□ 1.36
TRIM56-202ENST00000412507 STRIP1Q5VSL9 837 aa23.56■■□□□ 1.36
TRIM56-202ENST00000412507 TTLL5Q6EMB2 1281 aa23.56■■□□□ 1.36
TRIM56-202ENST00000412507 ZNF804AQ7Z570 1209 aa23.56■■□□□ 1.36
TRIM56-202ENST00000412507 TMEM57Q8N5G2 664 aa23.56■■□□□ 1.36
TRIM56-202ENST00000412507 PGAP2Q9UHJ9 254 aa23.56■■□□□ 1.36
TRIM56-202ENST00000412507 GTF2IP78347 998 aa23.55■■□□□ 1.36
TRIM56-202ENST00000412507 PTPN12Q05209 780 aaKnown RBP23.55■■□□□ 1.36
TRIM56-202ENST00000412507 ZC3H15Q8WU90 426 aaKnown RBP23.55■■□□□ 1.36
TRIM56-202ENST00000412507 CREBZFQ9NS37 354 aa23.55■■□□□ 1.36
TRIM56-202ENST00000412507 EYA2O00167 538 aa23.54■■□□□ 1.36
TRIM56-202ENST00000412507 TRAF5O00463 557 aa23.54■■□□□ 1.36
TRIM56-202ENST00000412507 KIF4BQ2VIQ3 1234 aa23.54■■□□□ 1.36
TRIM56-202ENST00000412507 KLRG1Q96E93 195 aa23.54■■□□□ 1.36
TRIM56-202ENST00000412507 ECM29Q5VYK3 1845 aa23.54■■□□□ 1.36
TRIM56-202ENST00000412507 ARAP2Q8WZ64 1704 aa23.53■■□□□ 1.36
TRIM56-202ENST00000412507 TMEM88BA6NKF7 163 aa23.53■■□□□ 1.36
TRIM56-202ENST00000412507 PDE8BO95263 885 aa23.53■■□□□ 1.36
TRIM56-202ENST00000412507 USP17L8P0C7I0 530 aa23.53■■□□□ 1.36
TRIM56-202ENST00000412507 IL1R1P14778 569 aa23.53■■□□□ 1.36
TRIM56-202ENST00000412507 ZNF280AP59817 542 aaPredicted RBP23.53■■□□□ 1.36
TRIM56-202ENST00000412507 VGLL2Q8N8G2 317 aa23.53■■□□□ 1.36
TRIM56-202ENST00000412507 GLIS2Q9BZE0 524 aaPredicted RBP23.53■■□□□ 1.36
TRIM56-202ENST00000412507 GYG1P46976 350 aa23.52■■□□□ 1.36
TRIM56-202ENST00000412507 SIL1Q9H173 461 aa23.52■■□□□ 1.36
TRIM56-202ENST00000412507 MYO3BQ8WXR4 1341 aa23.52■■□□□ 1.36
TRIM56-202ENST00000412507 ATG9AQ7Z3C6 839 aa23.51■■□□□ 1.35
TRIM56-202ENST00000412507 FTSJ3Q8IY81 847 aaKnown RBP23.51■■□□□ 1.35
TRIM56-202ENST00000412507 DZIP1LQ8IYY4 767 aaKnown RBP23.51■■□□□ 1.35
TRIM56-202ENST00000412507 FAM84BQ96KN1 310 aaPredicted RBP23.51■■□□□ 1.35
TRIM56-202ENST00000412507 MYOZ2Q9NPC6 264 aa23.51■■□□□ 1.35
TRIM56-202ENST00000412507 PA2G4Q9UQ80 394 aaKnown RBP23.51■■□□□ 1.35
TRIM56-202ENST00000412507 RLBP1P12271 317 aa23.5■■□□□ 1.35
TRIM56-202ENST00000412507 HIBADHP31937 336 aaKnown RBP23.5■■□□□ 1.35
TRIM56-202ENST00000412507 GNAI2P04899 355 aa23.49■■□□□ 1.35
TRIM56-202ENST00000412507 CDC37L1Q7L3B6 337 aa23.49■■□□□ 1.35
TRIM56-202ENST00000412507 USP48Q86UV5 1035 aa23.49■■□□□ 1.35
TRIM56-202ENST00000412507 JAG2Q9Y219 1238 aa23.49■■□□□ 1.35
TRIM56-202ENST00000412507 ASTN2O75129 1339 aaPredicted RBP23.49■■□□□ 1.35
TRIM56-202ENST00000412507 SRGAP3O43295 1099 aa23.48■■□□□ 1.35
TRIM56-202ENST00000412507 SCARF1Q14162 830 aa23.48■■□□□ 1.35
TRIM56-202ENST00000412507 KIAA0825Q8IV33 1275 aa23.48■■□□□ 1.35
TRIM56-202ENST00000412507 OGFOD1Q8N543 542 aa23.48■■□□□ 1.35
TRIM56-202ENST00000412507 CERS5Q8N5B7 392 aa23.48■■□□□ 1.35
TRIM56-202ENST00000412507 TDRD7Q8NHU6 1098 aaKnown RBP23.48■■□□□ 1.35
TRIM56-202ENST00000412507 MKRN1Q9UHC7 482 aaKnown RBP23.48■■□□□ 1.35
TRIM56-202ENST00000412507 FBXO3Q9UK99 471 aa23.48■■□□□ 1.35
TRIM56-202ENST00000412507 CIAO1O76071 339 aa23.47■■□□□ 1.35
TRIM56-202ENST00000412507 MTX1Q13505 466 aa23.47■■□□□ 1.35
TRIM56-202ENST00000412507 ITPRIPQ8IWB1 547 aa23.47■■□□□ 1.35
TRIM56-202ENST00000412507 DCPSQ96C86 337 aaKnown RBP23.47■■□□□ 1.35
TRIM56-202ENST00000412507 COPRSQ9NQ92 184 aa23.47■■□□□ 1.35
TRIM56-202ENST00000412507 GGA3Q9NZ52 723 aa23.47■■□□□ 1.35
TRIM56-202ENST00000412507 SASH1O94885 1247 aa23.46■■□□□ 1.35
TRIM56-202ENST00000412507 FGFR2P21802 821 aa23.46■■□□□ 1.35
TRIM56-202ENST00000412507 PUM3Q15397 648 aaKnown RBP23.46■■□□□ 1.35
TRIM56-202ENST00000412507 CST9Q5W186 159 aa23.46■■□□□ 1.35
TRIM56-202ENST00000412507 DLK2Q6UY11 383 aa23.46■■□□□ 1.35
TRIM56-202ENST00000412507 KRT26Q7Z3Y9 468 aa23.46■■□□□ 1.35
TRIM56-202ENST00000412507 FBXO33Q7Z6M2 555 aa23.46■■□□□ 1.35
TRIM56-202ENST00000412507 FAM205AQ6ZU69 1335 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms