RNA–Protein interactions for RNA: ENST00000411788.5

SEMA3C-202, Transcript of semaphorin 3C, humanhuman

TSL 5

Gene SEMA3C, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-202ENST00000411788 SCG3Q8WXD2 468 aaKnown RBP5.35□□□□□ -1.55
SEMA3C-202ENST00000411788 SGSM3Q96HU1 749 aa5.35□□□□□ -1.55
SEMA3C-202ENST00000411788 ZIC5Q96T25 663 aa5.35□□□□□ -1.55
SEMA3C-202ENST00000411788 NCAPGQ9BPX3 1015 aa5.35□□□□□ -1.55
SEMA3C-202ENST00000411788 SLAIN2Q9P270 581 aa5.35□□□□□ -1.55
SEMA3C-202ENST00000411788 DCTN4Q9UJW0 460 aa5.35□□□□□ -1.55
SEMA3C-202ENST00000411788 KNSTRNQ9Y448 316 aa5.35□□□□□ -1.55
SEMA3C-202ENST00000411788 KIF3AQ9Y496 699 aa5.35□□□□□ -1.55
SEMA3C-202ENST00000411788 ATAD2Q6PL18 1390 aa5.34□□□□□ -1.55
SEMA3C-202ENST00000411788 A6NJY4 79 aa5.34□□□□□ -1.55
SEMA3C-202ENST00000411788 C9orf172C9J069 976 aa5.34□□□□□ -1.55
SEMA3C-202ENST00000411788 PPP1R12BO60237 982 aaPredicted RBP5.34□□□□□ -1.55
SEMA3C-202ENST00000411788 SIN3BO75182 1162 aa5.34□□□□□ -1.55
SEMA3C-202ENST00000411788 H2AFB1P0C5Y9 115 aa5.34□□□□□ -1.55
SEMA3C-202ENST00000411788 H2AFB2P0C5Z0 115 aa5.34□□□□□ -1.55
SEMA3C-202ENST00000411788 FKBP5Q13451 457 aaPredicted RBP5.34□□□□□ -1.55
SEMA3C-202ENST00000411788 COL19A1Q14993 1142 aa5.34□□□□□ -1.55
SEMA3C-202ENST00000411788 MTFR1Q15390 333 aa5.34□□□□□ -1.55
SEMA3C-202ENST00000411788 NFKBIBQ15653 356 aa5.34□□□□□ -1.55
SEMA3C-202ENST00000411788 HIF1AQ16665 826 aa5.34□□□□□ -1.55
SEMA3C-202ENST00000411788 BICDL1Q6ZP65 573 aa5.34□□□□□ -1.55
SEMA3C-202ENST00000411788 NOL8Q76FK4 1167 aaKnown RBP5.34□□□□□ -1.55
SEMA3C-202ENST00000411788 ABTB2Q8N961 1025 aa5.34□□□□□ -1.55
SEMA3C-202ENST00000411788 DCAF11Q8TEB1 546 aa5.34□□□□□ -1.55
SEMA3C-202ENST00000411788 ZNF428Q96B54 188 aa5.34□□□□□ -1.55
SEMA3C-202ENST00000411788 CITED4Q96RK1 184 aa5.34□□□□□ -1.55
SEMA3C-202ENST00000411788 PRDM6Q9NQX0 595 aa5.34□□□□□ -1.55
SEMA3C-202ENST00000411788 SMC4Q9NTJ3 1288 aa5.34□□□□□ -1.55
SEMA3C-202ENST00000411788 SCHIP1Q9P0W5 487 aaPredicted RBP5.34□□□□□ -1.55
SEMA3C-202ENST00000411788 RBM47A0AV96 593 aaKnown RBP5.33□□□□□ -1.56
SEMA3C-202ENST00000411788 ADARB2-AS1A8MUL3 147 aa5.33□□□□□ -1.56
SEMA3C-202ENST00000411788 FAM229AH3BQW9 127 aa5.33□□□□□ -1.56
SEMA3C-202ENST00000411788 M0R082 166 aa5.33□□□□□ -1.56
SEMA3C-202ENST00000411788 CDK2AP1O14519 115 aa5.33□□□□□ -1.56
SEMA3C-202ENST00000411788 EFSO43281 561 aa5.33□□□□□ -1.56
SEMA3C-202ENST00000411788 NDUFB5O43674 189 aa5.33□□□□□ -1.56
SEMA3C-202ENST00000411788 ZNF853P0CG23 659 aa5.33□□□□□ -1.56
SEMA3C-202ENST00000411788 POLD1P28340 1107 aa5.33□□□□□ -1.56
SEMA3C-202ENST00000411788 C16orf46Q6P387 395 aa5.33□□□□□ -1.56
SEMA3C-202ENST00000411788 KIAA1211Q6ZU35 1233 aa5.33□□□□□ -1.56
SEMA3C-202ENST00000411788 CREBRFQ8IUR6 639 aa5.33□□□□□ -1.56
SEMA3C-202ENST00000411788 ZNF513Q8N8E2 541 aaPredicted RBP5.33□□□□□ -1.56
SEMA3C-202ENST00000411788 ZNF417Q8TAU3 575 aa5.33□□□□□ -1.56
SEMA3C-202ENST00000411788 FOXD4L4Q8WXT5 416 aaPredicted RBP5.33□□□□□ -1.56
SEMA3C-202ENST00000411788 TIGD1Q96MW7 591 aa5.33□□□□□ -1.56
SEMA3C-202ENST00000411788 ZNF587Q96SQ5 575 aaPredicted RBP5.33□□□□□ -1.56
SEMA3C-202ENST00000411788 MKNK1Q9BUB5 465 aa5.33□□□□□ -1.56
SEMA3C-202ENST00000411788 CALCOCO1Q9P1Z2 691 aa5.33□□□□□ -1.56
SEMA3C-202ENST00000411788 SERTAD1Q9UHV2 236 aa5.33□□□□□ -1.56
SEMA3C-202ENST00000411788 ANAPC4Q9UJX5 808 aa5.33□□□□□ -1.56
SEMA3C-202ENST00000411788 CTAGE5O15320 804 aa5.32□□□□□ -1.56
SEMA3C-202ENST00000411788 MAPK1P28482 360 aa5.32□□□□□ -1.56
SEMA3C-202ENST00000411788 HIRAP54198 1017 aaPredicted RBP5.32□□□□□ -1.56
SEMA3C-202ENST00000411788 EPHA4P54764 986 aa5.32□□□□□ -1.56
SEMA3C-202ENST00000411788 UVSSAQ2YD98 709 aa5.32□□□□□ -1.56
SEMA3C-202ENST00000411788 WDR78Q5VTH9 848 aa5.32□□□□□ -1.56
SEMA3C-202ENST00000411788 SNRNP27Q8WVK2 155 aaKnown RBP5.32□□□□□ -1.56
SEMA3C-202ENST00000411788 MDFIQ99750 246 aa5.32□□□□□ -1.56
SEMA3C-202ENST00000411788 HIRIP3Q9BW71 556 aaPredicted RBP5.32□□□□□ -1.56
SEMA3C-202ENST00000411788 TSPAN10Q9H1Z9 355 aaPredicted RBP5.32□□□□□ -1.56
SEMA3C-202ENST00000411788 SUDS3Q9H7L9 328 aaPredicted RBP5.32□□□□□ -1.56
SEMA3C-202ENST00000411788 GOLGA2P5Q9HBQ8 144 aa5.32□□□□□ -1.56
SEMA3C-202ENST00000411788 STRN4Q9NRL3 753 aa5.32□□□□□ -1.56
SEMA3C-202ENST00000411788 DONSONQ9NYP3 566 aa5.32□□□□□ -1.56
SEMA3C-202ENST00000411788 CABP1Q9NZU7 370 aa5.32□□□□□ -1.56
SEMA3C-202ENST00000411788 CGNQ9P2M7 1197 aaKnown RBP5.32□□□□□ -1.56
SEMA3C-202ENST00000411788 PHLDB1Q86UU1 1377 aa5.31□□□□□ -1.56
SEMA3C-202ENST00000411788 ZBED9Q6R2W3 1325 aa5.31□□□□□ -1.56
SEMA3C-202ENST00000411788 CCER2I3L3R5 266 aa5.31□□□□□ -1.56
SEMA3C-202ENST00000411788 TULP2O00295 520 aa5.31□□□□□ -1.56
SEMA3C-202ENST00000411788 MPHOSPH10O00566 681 aaKnown RBP5.31□□□□□ -1.56
SEMA3C-202ENST00000411788 HYAL3O43820 417 aaPredicted RBP5.31□□□□□ -1.56
SEMA3C-202ENST00000411788 OFD1O75665 1012 aa5.31□□□□□ -1.56
SEMA3C-202ENST00000411788 NPR3P17342 541 aa5.31□□□□□ -1.56
SEMA3C-202ENST00000411788 ZNF211Q13398 564 aaPredicted RBP5.31□□□□□ -1.56
SEMA3C-202ENST00000411788 GRIK4Q16099 956 aa5.31□□□□□ -1.56
SEMA3C-202ENST00000411788 GORABQ5T7V8 394 aa5.31□□□□□ -1.56
SEMA3C-202ENST00000411788 DDX46Q7L014 1031 aaKnown RBP5.31□□□□□ -1.56
SEMA3C-202ENST00000411788 SLC9A9Q8IVB4 645 aa5.31□□□□□ -1.56
SEMA3C-202ENST00000411788 ANKRD13AQ8IZ07 590 aa5.31□□□□□ -1.56
SEMA3C-202ENST00000411788 TNS4Q8IZW8 715 aa5.31□□□□□ -1.56
SEMA3C-202ENST00000411788 MICALL1Q8N3F8 863 aa5.31□□□□□ -1.56
SEMA3C-202ENST00000411788 CHMP7Q8WUX9 453 aaPredicted RBP5.31□□□□□ -1.56
SEMA3C-202ENST00000411788 TNFRSF25Q93038 417 aa5.31□□□□□ -1.56
SEMA3C-202ENST00000411788 MYO19Q96H55 970 aa5.31□□□□□ -1.56
SEMA3C-202ENST00000411788 ASB16Q96NS5 453 aa5.31□□□□□ -1.56
SEMA3C-202ENST00000411788 MTA3Q9BTC8 594 aa5.31□□□□□ -1.56
SEMA3C-202ENST00000411788 C2orf49Q9BVC5 232 aaPredicted RBP5.31□□□□□ -1.56
SEMA3C-202ENST00000411788 SCRIBQ14160 1630 aa5.3□□□□□ -1.56
SEMA3C-202ENST00000411788 SERTM1A2A2V5 107 aa5.3□□□□□ -1.56
SEMA3C-202ENST00000411788 GOLGA6CA6NDK9 693 aa5.3□□□□□ -1.56
SEMA3C-202ENST00000411788 GOLGA6BA6NDN3 693 aa5.3□□□□□ -1.56
SEMA3C-202ENST00000411788 PPP1R12AO14974 1030 aaPredicted RBP5.3□□□□□ -1.56
SEMA3C-202ENST00000411788 GOLGA6DP0CG33 693 aa5.3□□□□□ -1.56
SEMA3C-202ENST00000411788 PCSK2P16519 638 aa5.3□□□□□ -1.56
SEMA3C-202ENST00000411788 SCP2P22307 547 aa5.3□□□□□ -1.56
SEMA3C-202ENST00000411788 USP5P45974 858 aa5.3□□□□□ -1.56
SEMA3C-202ENST00000411788 TDO2P48775 406 aa5.3□□□□□ -1.56
SEMA3C-202ENST00000411788 GABPB1Q06547 395 aaPredicted RBP5.3□□□□□ -1.56
SEMA3C-202ENST00000411788 TRDNQ13061 729 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms