RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 ZNF445P59923 1031 aa16.16■□□□□ 0.18
LIMS1-205ENST00000410093 PKP1Q13835 747 aa16.16■□□□□ 0.18
LIMS1-205ENST00000410093 TTF1Q15361 905 aaPredicted RBP16.16■□□□□ 0.18
LIMS1-205ENST00000410093 HLFQ16534 295 aa16.16■□□□□ 0.18
LIMS1-205ENST00000410093 ADCK5Q3MIX3 580 aa16.16■□□□□ 0.18
LIMS1-205ENST00000410093 ZNF589Q86UQ0 364 aaPredicted RBP16.16■□□□□ 0.18
LIMS1-205ENST00000410093 PIAS4Q8N2W9 510 aaPredicted RBP16.16■□□□□ 0.18
LIMS1-205ENST00000410093 TMEM87AQ8NBN3 555 aa16.16■□□□□ 0.18
LIMS1-205ENST00000410093 SLC16A10Q8TF71 515 aa16.16■□□□□ 0.18
LIMS1-205ENST00000410093 SYAP1Q96A49 352 aaPredicted RBP16.16■□□□□ 0.18
LIMS1-205ENST00000410093 GZF1Q9H116 711 aaPredicted RBP16.16■□□□□ 0.18
LIMS1-205ENST00000410093 CTNNA3Q9UI47 895 aa16.16■□□□□ 0.18
LIMS1-205ENST00000410093 ZNF652Q9Y2D9 606 aa16.16■□□□□ 0.18
LIMS1-205ENST00000410093 RIPOR2Q9Y4F9 1068 aa16.16■□□□□ 0.18
LIMS1-205ENST00000410093 GOLIM4O00461 696 aa16.15■□□□□ 0.18
LIMS1-205ENST00000410093 STX6O43752 255 aa16.15■□□□□ 0.18
LIMS1-205ENST00000410093 ZSCAN22P10073 491 aaPredicted RBP16.15■□□□□ 0.18
LIMS1-205ENST00000410093 ITGA6P23229 1130 aa16.15■□□□□ 0.18
LIMS1-205ENST00000410093 LDHAL6AQ6ZMR3 332 aa16.15■□□□□ 0.18
LIMS1-205ENST00000410093 XAGE2Q96GT9 111 aa16.15■□□□□ 0.18
LIMS1-205ENST00000410093 ZNF594Q96JF6 807 aaPredicted RBP16.15■□□□□ 0.18
LIMS1-205ENST00000410093 NEK1Q96PY6 1258 aa16.15■□□□□ 0.18
LIMS1-205ENST00000410093 ARXQ96QS3 562 aa16.15■□□□□ 0.18
LIMS1-205ENST00000410093 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.15■□□□□ 0.18
LIMS1-205ENST00000410093 LOC102724428A0A0B4J2F2 783 aa16.14■□□□□ 0.18
LIMS1-205ENST00000410093 ATP6V1AP38606 617 aa16.14■□□□□ 0.18
LIMS1-205ENST00000410093 SIK1P57059 783 aa16.14■□□□□ 0.18
LIMS1-205ENST00000410093 NOL8Q76FK4 1167 aaKnown RBP16.14■□□□□ 0.18
LIMS1-205ENST00000410093 DDX46Q7L014 1031 aaKnown RBP16.14■□□□□ 0.18
LIMS1-205ENST00000410093 GRPEL1Q9HAV7 217 aa16.14■□□□□ 0.18
LIMS1-205ENST00000410093 BCORQ6W2J9 1755 aa16.14■□□□□ 0.17
LIMS1-205ENST00000410093 CASZ1Q86V15 1759 aa16.14■□□□□ 0.17
LIMS1-205ENST00000410093 UQCRFS1P1P0C7P4 283 aa16.14■□□□□ 0.17
LIMS1-205ENST00000410093 POLD1P28340 1107 aa16.14■□□□□ 0.17
LIMS1-205ENST00000410093 ATP2B3Q16720 1220 aa16.14■□□□□ 0.17
LIMS1-205ENST00000410093 METTL24Q5JXM2 366 aa16.14■□□□□ 0.17
LIMS1-205ENST00000410093 INTS5Q6P9B9 1019 aaKnown RBP16.14■□□□□ 0.17
LIMS1-205ENST00000410093 CLEC4GQ6UXB4 293 aa16.14■□□□□ 0.17
LIMS1-205ENST00000410093 PUS3Q9BZE2 481 aaKnown RBP16.14■□□□□ 0.17
LIMS1-205ENST00000410093 CNNM1Q9NRU3 951 aa16.14■□□□□ 0.17
LIMS1-205ENST00000410093 LY75O60449 1722 aa16.13■□□□□ 0.17
LIMS1-205ENST00000410093 RIC1Q4ADV7 1423 aa16.13■□□□□ 0.17
LIMS1-205ENST00000410093 PRPF40AO75400 957 aaKnown RBP16.13■□□□□ 0.17
LIMS1-205ENST00000410093 PHF14O94880 888 aa16.13■□□□□ 0.17
LIMS1-205ENST00000410093 FBXL16Q8N461 479 aa16.13■□□□□ 0.17
LIMS1-205ENST00000410093 EDC3Q96F86 508 aaKnown RBP16.13■□□□□ 0.17
LIMS1-205ENST00000410093 UTP14AQ9BVJ6 771 aaKnown RBP16.13■□□□□ 0.17
LIMS1-205ENST00000410093 PDE8BO95263 885 aa16.12■□□□□ 0.17
LIMS1-205ENST00000410093 SYT1P21579 422 aa16.12■□□□□ 0.17
LIMS1-205ENST00000410093 GPTP24298 496 aa16.12■□□□□ 0.17
LIMS1-205ENST00000410093 CRKLP46109 303 aaKnown RBP16.12■□□□□ 0.17
LIMS1-205ENST00000410093 FLAD1Q8NFF5 587 aa16.12■□□□□ 0.17
LIMS1-205ENST00000410093 GREM2Q9H772 168 aa16.12■□□□□ 0.17
LIMS1-205ENST00000410093 PNPLA7Q6ZV29 1317 aa16.11■□□□□ 0.17
LIMS1-205ENST00000410093 AKAP11Q9UKA4 1901 aa16.11■□□□□ 0.17
LIMS1-205ENST00000410093 XRCC6P12956 609 aaKnown RBP eCLIP16.11■□□□□ 0.17
LIMS1-205ENST00000410093 PTGER2P43116 358 aa16.11■□□□□ 0.17
LIMS1-205ENST00000410093 ME3Q16798 604 aa16.11■□□□□ 0.17
LIMS1-205ENST00000410093 LLPHQ9BRT6 129 aaKnown RBP16.11■□□□□ 0.17
LIMS1-205ENST00000410093 KIF3AQ9Y496 699 aa16.11■□□□□ 0.17
LIMS1-205ENST00000410093 LAMA4Q16363 1823 aa16.11■□□□□ 0.17
LIMS1-205ENST00000410093 F13A1P00488 732 aa16.1■□□□□ 0.17
LIMS1-205ENST00000410093 GJB2P29033 226 aa16.1■□□□□ 0.17
LIMS1-205ENST00000410093 PUM3Q15397 648 aaKnown RBP16.1■□□□□ 0.17
LIMS1-205ENST00000410093 CCDC152Q4G0S7 254 aa16.1■□□□□ 0.17
LIMS1-205ENST00000410093 DHX32Q7L7V1 743 aaKnown RBP16.1■□□□□ 0.17
LIMS1-205ENST00000410093 CCDC83Q8IWF9 413 aa16.1■□□□□ 0.17
LIMS1-205ENST00000410093 VGLL2Q8N8G2 317 aa16.1■□□□□ 0.17
LIMS1-205ENST00000410093 LPIN2Q92539 896 aa16.1■□□□□ 0.17
LIMS1-205ENST00000410093 APPBP2Q92624 585 aa16.1■□□□□ 0.17
LIMS1-205ENST00000410093 TPCN1Q9ULQ1 816 aa16.1■□□□□ 0.17
LIMS1-205ENST00000410093 DDX60Q8IY21 1712 aaKnown RBP16.1■□□□□ 0.17
LIMS1-205ENST00000410093 CAMTA2O94983 1202 aa16.09■□□□□ 0.17
LIMS1-205ENST00000410093 LETM1O95202 739 aaPredicted RBP16.09■□□□□ 0.17
LIMS1-205ENST00000410093 HSPD1P10809 573 aaKnown RBP16.09■□□□□ 0.17
LIMS1-205ENST00000410093 ANP32BQ92688 251 aaKnown RBP16.09■□□□□ 0.17
LIMS1-205ENST00000410093 TBC1D2BQ9UPU7 963 aa16.09■□□□□ 0.17
LIMS1-205ENST00000410093 UBN2Q6ZU65 1347 aa16.09■□□□□ 0.17
LIMS1-205ENST00000410093 MYH14Q7Z406 1995 aaKnown RBP16.09■□□□□ 0.17
LIMS1-205ENST00000410093 CYP21A2P08686 494 aa16.09■□□□□ 0.17
LIMS1-205ENST00000410093 ARID4AP29374 1257 aaPredicted RBP16.09■□□□□ 0.17
LIMS1-205ENST00000410093 FKBP4Q02790 459 aaKnown RBP eCLIP16.09■□□□□ 0.17
LIMS1-205ENST00000410093 TOB2Q14106 344 aaPredicted RBP16.09■□□□□ 0.17
LIMS1-205ENST00000410093 AGXT2Q9BYV1 514 aa16.09■□□□□ 0.17
LIMS1-205ENST00000410093 MAST3O60307 1309 aa16.08■□□□□ 0.17
LIMS1-205ENST00000410093 WDR19Q8NEZ3 1342 aa16.08■□□□□ 0.17
LIMS1-205ENST00000410093 CNTNAP4Q9C0A0 1308 aa16.08■□□□□ 0.17
LIMS1-205ENST00000410093 SLC5A1P13866 664 aa16.08■□□□□ 0.16
LIMS1-205ENST00000410093 CPA1P15085 419 aa16.08■□□□□ 0.16
LIMS1-205ENST00000410093 UBE3CQ15386 1083 aa16.08■□□□□ 0.16
LIMS1-205ENST00000410093 ZSCAN23Q3MJ62 389 aa16.08■□□□□ 0.16
LIMS1-205ENST00000410093 TCHHQ07283 1943 aa16.08■□□□□ 0.16
LIMS1-205ENST00000410093 IMMTQ16891 758 aaKnown RBP16.07■□□□□ 0.16
LIMS1-205ENST00000410093 RC3H1Q5TC82 1133 aaKnown RBP16.07■□□□□ 0.16
LIMS1-205ENST00000410093 LARP1BQ659C4 914 aaKnown RBP16.07■□□□□ 0.16
LIMS1-205ENST00000410093 CAVIN1Q6NZI2 390 aaKnown RBP16.07■□□□□ 0.16
LIMS1-205ENST00000410093 COL23A1Q86Y22 540 aaPredicted RBP16.07■□□□□ 0.16
LIMS1-205ENST00000410093 RGS22Q8NE09 1264 aa16.07■□□□□ 0.16
LIMS1-205ENST00000410093 GTF3C6Q969F1 213 aa16.07■□□□□ 0.16
LIMS1-205ENST00000410093 SEC62Q99442 399 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms