RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 GPLD1P80108 840 aa7.06□□□□□ -1.28
LSM5-205ENST00000409952 PDE3BQ13370 1112 aa7.06□□□□□ -1.28
LSM5-205ENST00000409952 SDE2Q6IQ49 451 aa7.06□□□□□ -1.28
LSM5-205ENST00000409952 ALKBH2Q6NS38 261 aa7.06□□□□□ -1.28
LSM5-205ENST00000409952 DHX32Q7L7V1 743 aaKnown RBP7.06□□□□□ -1.28
LSM5-205ENST00000409952 PNMA5Q96PV4 448 aa7.06□□□□□ -1.28
LSM5-205ENST00000409952 TLR7Q9NYK1 1049 aaKnown RBP7.06□□□□□ -1.28
LSM5-205ENST00000409952 TBX22Q9Y458 520 aa7.06□□□□□ -1.28
LSM5-205ENST00000409952 IGHA2P01877 340 aa7.05□□□□□ -1.28
LSM5-205ENST00000409952 NID1P14543 1247 aa7.05□□□□□ -1.28
LSM5-205ENST00000409952 DNAJA1P31689 397 aaKnown RBP7.05□□□□□ -1.28
LSM5-205ENST00000409952 SOX18P35713 384 aa7.05□□□□□ -1.28
LSM5-205ENST00000409952 NRLP54845 237 aa7.05□□□□□ -1.28
LSM5-205ENST00000409952 RBL2Q08999 1139 aa7.05□□□□□ -1.28
LSM5-205ENST00000409952 PCSK7Q16549 785 aa7.05□□□□□ -1.28
LSM5-205ENST00000409952 SOGA3Q5TF21 947 aa7.05□□□□□ -1.28
LSM5-205ENST00000409952 CMTR1Q8N1G2 835 aaKnown RBP7.05□□□□□ -1.28
LSM5-205ENST00000409952 ALKBH8Q96BT7 664 aaKnown RBP7.05□□□□□ -1.28
LSM5-205ENST00000409952 FAM129BQ96TA1 746 aa7.05□□□□□ -1.28
LSM5-205ENST00000409952 UBE2OQ9C0C9 1292 aaKnown RBP7.05□□□□□ -1.28
LSM5-205ENST00000409952 RNF19AQ9NV58 838 aa7.05□□□□□ -1.28
LSM5-205ENST00000409952 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.05□□□□□ -1.28
LSM5-205ENST00000409952 SBNO2Q9Y2G9 1366 aa7.05□□□□□ -1.28
LSM5-205ENST00000409952 M0R082 166 aa7.04□□□□□ -1.28
LSM5-205ENST00000409952 GPR182O15218 404 aa7.04□□□□□ -1.28
LSM5-205ENST00000409952 FZD6O60353 706 aa7.04□□□□□ -1.28
LSM5-205ENST00000409952 RARAP10276 462 aa7.04□□□□□ -1.28
LSM5-205ENST00000409952 EIF1AXP47813 144 aaKnown RBP7.04□□□□□ -1.28
LSM5-205ENST00000409952 TNNI2P48788 182 aa7.04□□□□□ -1.28
LSM5-205ENST00000409952 ARID5AQ03989 594 aa7.04□□□□□ -1.28
LSM5-205ENST00000409952 PLA2G4EQ3MJ16 856 aa7.04□□□□□ -1.28
LSM5-205ENST00000409952 EGFLAMQ63HQ2 1017 aa7.04□□□□□ -1.28
LSM5-205ENST00000409952 NLRP13Q86W25 1043 aa7.04□□□□□ -1.28
LSM5-205ENST00000409952 ZNF417Q8TAU3 575 aa7.04□□□□□ -1.28
LSM5-205ENST00000409952 TTC9Q92623 222 aa7.04□□□□□ -1.28
LSM5-205ENST00000409952 PSMG3-AS1Q96PY0 264 aa7.04□□□□□ -1.28
LSM5-205ENST00000409952 ZNF587Q96SQ5 575 aaPredicted RBP7.04□□□□□ -1.28
LSM5-205ENST00000409952 CCDC87Q9NVE4 849 aa7.04□□□□□ -1.28
LSM5-205ENST00000409952 FRRS1LQ9P0K9 344 aa7.04□□□□□ -1.28
LSM5-205ENST00000409952 KRBA1A5PL33 1030 aa7.03□□□□□ -1.28
LSM5-205ENST00000409952 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.03□□□□□ -1.28
LSM5-205ENST00000409952 MMP20O60882 483 aa7.03□□□□□ -1.28
LSM5-205ENST00000409952 AAMPQ13685 434 aa7.03□□□□□ -1.28
LSM5-205ENST00000409952 ALG1LQ6GMV1 187 aa7.03□□□□□ -1.28
LSM5-205ENST00000409952 XKR5Q6UX68 686 aa7.03□□□□□ -1.28
LSM5-205ENST00000409952 KRT25Q7Z3Z0 450 aa7.03□□□□□ -1.28
LSM5-205ENST00000409952 PMFBP1Q8TBY8 1022 aa7.03□□□□□ -1.28
LSM5-205ENST00000409952 GPR152Q8TDT2 470 aa7.03□□□□□ -1.28
LSM5-205ENST00000409952 PIF1Q9H611 641 aa7.03□□□□□ -1.28
LSM5-205ENST00000409952 ZSWIM4Q9H7M6 989 aa7.03□□□□□ -1.28
LSM5-205ENST00000409952 NOP53Q9NZM5 478 aaKnown RBP7.03□□□□□ -1.28
LSM5-205ENST00000409952 WWC3Q9ULE0 1092 aa7.03□□□□□ -1.28
LSM5-205ENST00000409952 UBAP1LF5GYI3 381 aa7.02□□□□□ -1.29
LSM5-205ENST00000409952 ENOX2Q16206 610 aaKnown RBP7.02□□□□□ -1.29
LSM5-205ENST00000409952 GRIK5Q16478 980 aa7.02□□□□□ -1.29
LSM5-205ENST00000409952 PDE12Q6L8Q7 609 aaKnown RBP7.02□□□□□ -1.29
LSM5-205ENST00000409952 C8orf86Q6ZUL3 223 aa7.02□□□□□ -1.29
LSM5-205ENST00000409952 ATCAYQ86WG3 371 aa7.02□□□□□ -1.29
LSM5-205ENST00000409952 OR13H1Q8NG92 308 aa7.02□□□□□ -1.29
LSM5-205ENST00000409952 LPIN3Q9BQK8 851 aa7.02□□□□□ -1.29
LSM5-205ENST00000409952 KRTAP9-2Q9BYQ4 174 aa7.02□□□□□ -1.29
LSM5-205ENST00000409952 INPP5FQ9Y2H2 1132 aa7.02□□□□□ -1.29
LSM5-205ENST00000409952 ARID4BQ4LE39 1312 aaPredicted RBP7.01□□□□□ -1.29
LSM5-205ENST00000409952 MARCH6O60337 910 aa7.01□□□□□ -1.29
LSM5-205ENST00000409952 PDGFAP04085 211 aa7.01□□□□□ -1.29
LSM5-205ENST00000409952 MZF1P28698 734 aaPredicted RBP7.01□□□□□ -1.29
LSM5-205ENST00000409952 GNA15P30679 374 aa7.01□□□□□ -1.29
LSM5-205ENST00000409952 NOL8Q76FK4 1167 aaKnown RBP7.01□□□□□ -1.29
LSM5-205ENST00000409952 ZNF654Q8IZM8 581 aa7.01□□□□□ -1.29
LSM5-205ENST00000409952 NUDT16Q96DE0 195 aaKnown RBP7.01□□□□□ -1.29
LSM5-205ENST00000409952 CRELD1Q96HD1 420 aa7.01□□□□□ -1.29
LSM5-205ENST00000409952 PLVAPQ9BX97 442 aa7.01□□□□□ -1.29
LSM5-205ENST00000409952 OSBPL2Q9H1P3 480 aa7.01□□□□□ -1.29
LSM5-205ENST00000409952 FNDC3AQ9Y2H6 1198 aaKnown RBP7.01□□□□□ -1.29
LSM5-205ENST00000409952 PNMA6FA0A0J9YX94 578 aa7□□□□□ -1.29
LSM5-205ENST00000409952 LILRB5O75023 590 aa7□□□□□ -1.29
LSM5-205ENST00000409952 PROCP04070 461 aa7□□□□□ -1.29
LSM5-205ENST00000409952 RPLP1P05386 114 aaKnown RBP7□□□□□ -1.29
LSM5-205ENST00000409952 AFF1P51825 1210 aaKnown RBP7□□□□□ -1.29
LSM5-205ENST00000409952 PLAURQ03405 335 aa7□□□□□ -1.29
LSM5-205ENST00000409952 PERM1Q5SV97 790 aa7□□□□□ -1.29
LSM5-205ENST00000409952 PSAPL1Q6NUJ1 521 aa7□□□□□ -1.29
LSM5-205ENST00000409952 NLGN1Q8N2Q7 840 aa7□□□□□ -1.29
LSM5-205ENST00000409952 MICAL1Q8TDZ2 1067 aa7□□□□□ -1.29
LSM5-205ENST00000409952 SETDB2Q96T68 719 aa7□□□□□ -1.29
LSM5-205ENST00000409952 DDX41Q9UJV9 622 aaKnown RBP7□□□□□ -1.29
LSM5-205ENST00000409952 LOC102724428A0A0B4J2F2 783 aa6.99□□□□□ -1.29
LSM5-205ENST00000409952 RAB11FIP3O75154 756 aa6.99□□□□□ -1.29
LSM5-205ENST00000409952 KIF4AO95239 1232 aa6.99□□□□□ -1.29
LSM5-205ENST00000409952 PSAPP07602 524 aa6.99□□□□□ -1.29
LSM5-205ENST00000409952 SIK1P57059 783 aa6.99□□□□□ -1.29
LSM5-205ENST00000409952 ZNF746Q6NUN9 644 aaPredicted RBP6.99□□□□□ -1.29
LSM5-205ENST00000409952 FAM35AQ86V20 835 aa6.99□□□□□ -1.29
LSM5-205ENST00000409952 VPS37DQ86XT2 251 aa6.99□□□□□ -1.29
LSM5-205ENST00000409952 FBF1Q8TES7 1133 aa6.99□□□□□ -1.29
LSM5-205ENST00000409952 EDEM1Q92611 657 aa6.99□□□□□ -1.29
LSM5-205ENST00000409952 SPACA7Q96KW9 195 aa6.99□□□□□ -1.29
LSM5-205ENST00000409952 FRMD6Q96NE9 622 aa6.99□□□□□ -1.29
LSM5-205ENST00000409952 SPOCK3Q9BQ16 436 aa6.99□□□□□ -1.29
LSM5-205ENST00000409952 NIF3L1Q9GZT8 377 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms