RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 NARFQ9UHQ1 456 aa23.54■■□□□ 1.36
LIMS2-207ENST00000409808 C4BP0C0L5 1744 aa23.54■■□□□ 1.36
LIMS2-207ENST00000409808 A0A1B0GUL7 405 aa23.54■■□□□ 1.36
LIMS2-207ENST00000409808 SYT1P21579 422 aa23.54■■□□□ 1.36
LIMS2-207ENST00000409808 ZSWIM6Q9HCJ5 1215 aa23.54■■□□□ 1.36
LIMS2-207ENST00000409808 ZNF609O15014 1411 aa23.53■■□□□ 1.36
LIMS2-207ENST00000409808 ATP5JP18859 108 aa23.53■■□□□ 1.36
LIMS2-207ENST00000409808 RIPOR2Q9Y4F9 1068 aa23.53■■□□□ 1.36
LIMS2-207ENST00000409808 SCN7AQ01118 1682 aa23.53■■□□□ 1.36
LIMS2-207ENST00000409808 F13A1P00488 732 aa23.53■■□□□ 1.36
LIMS2-207ENST00000409808 CASTP20810 708 aaKnown RBP23.53■■□□□ 1.36
LIMS2-207ENST00000409808 GPR108Q9NPR9 543 aa23.53■■□□□ 1.36
LIMS2-207ENST00000409808 SEC31BQ9NQW1 1179 aa23.53■■□□□ 1.36
LIMS2-207ENST00000409808 CYP46A1Q9Y6A2 500 aa23.53■■□□□ 1.36
LIMS2-207ENST00000409808 ZPR1O75312 459 aa23.52■■□□□ 1.36
LIMS2-207ENST00000409808 ERFEQ4G0M1 354 aa23.52■■□□□ 1.36
LIMS2-207ENST00000409808 GLIPR1L2Q4G1C9 344 aa23.52■■□□□ 1.36
LIMS2-207ENST00000409808 PDRG1Q9NUG6 133 aa23.52■■□□□ 1.36
LIMS2-207ENST00000409808 RNF214Q8ND24 703 aa23.51■■□□□ 1.35
LIMS2-207ENST00000409808 DNAJC2Q99543 621 aaKnown RBP23.51■■□□□ 1.35
LIMS2-207ENST00000409808 CNNM1Q9NRU3 951 aa23.51■■□□□ 1.35
LIMS2-207ENST00000409808 ADORA1P30542 326 aa23.51■■□□□ 1.35
LIMS2-207ENST00000409808 AK7Q96M32 723 aa23.51■■□□□ 1.35
LIMS2-207ENST00000409808 RIC1Q4ADV7 1423 aa23.51■■□□□ 1.35
LIMS2-207ENST00000409808 ZKSCAN1P17029 563 aaPredicted RBP23.5■■□□□ 1.35
LIMS2-207ENST00000409808 METTL24Q5JXM2 366 aa23.5■■□□□ 1.35
LIMS2-207ENST00000409808 GDPD2Q9HCC8 539 aa23.5■■□□□ 1.35
LIMS2-207ENST00000409808 FBXO3Q9UK99 471 aa23.5■■□□□ 1.35
LIMS2-207ENST00000409808 NECTIN1Q15223 517 aa23.5■■□□□ 1.35
LIMS2-207ENST00000409808 SNRKQ9NRH2 765 aa23.5■■□□□ 1.35
LIMS2-207ENST00000409808 C3orf67Q6ZVT6 689 aa23.49■■□□□ 1.35
LIMS2-207ENST00000409808 FSD1Q9BTV5 496 aa23.49■■□□□ 1.35
LIMS2-207ENST00000409808 CNPY2Q9Y2B0 182 aa23.49■■□□□ 1.35
LIMS2-207ENST00000409808 CCDC24Q8N4L8 307 aa23.49■■□□□ 1.35
LIMS2-207ENST00000409808 FAM227BQ96M60 508 aa23.49■■□□□ 1.35
LIMS2-207ENST00000409808 JAKMIP1Q96N16 626 aaKnown RBP23.49■■□□□ 1.35
LIMS2-207ENST00000409808 PTH1RQ03431 593 aa23.48■■□□□ 1.35
LIMS2-207ENST00000409808 CCDC171Q6TFL3 1326 aa23.48■■□□□ 1.35
LIMS2-207ENST00000409808 C4AP0C0L4 1744 aa23.48■■□□□ 1.35
LIMS2-207ENST00000409808 PSMA5P28066 241 aa23.48■■□□□ 1.35
LIMS2-207ENST00000409808 FOXD4L6Q3SYB3 417 aaPredicted RBP23.48■■□□□ 1.35
LIMS2-207ENST00000409808 TRAPPC3LQ5T215 181 aa23.48■■□□□ 1.35
LIMS2-207ENST00000409808 PRPF40BQ6NWY9 871 aaKnown RBP23.48■■□□□ 1.35
LIMS2-207ENST00000409808 FOXD4L3Q6VB84 417 aaPredicted RBP23.48■■□□□ 1.35
LIMS2-207ENST00000409808 HELBQ8NG08 1087 aaPredicted RBP23.48■■□□□ 1.35
LIMS2-207ENST00000409808 CHGBP05060 677 aa23.47■■□□□ 1.35
LIMS2-207ENST00000409808 RFC4P35249 363 aa23.47■■□□□ 1.35
LIMS2-207ENST00000409808 XAGE2Q96GT9 111 aa23.47■■□□□ 1.35
LIMS2-207ENST00000409808 HAUS7Q99871 368 aa23.47■■□□□ 1.35
LIMS2-207ENST00000409808 SPEF2Q9C093 1822 aa23.47■■□□□ 1.35
LIMS2-207ENST00000409808 PTMAP06454 111 aaKnown RBP23.47■■□□□ 1.35
LIMS2-207ENST00000409808 NMIQ13287 307 aaPredicted RBP23.47■■□□□ 1.35
LIMS2-207ENST00000409808 SETDB2Q96T68 719 aa23.47■■□□□ 1.35
LIMS2-207ENST00000409808 LAMB2P55268 1798 aa23.47■■□□□ 1.35
LIMS2-207ENST00000409808 COL4A1P02462 1669 aa23.46■■□□□ 1.35
LIMS2-207ENST00000409808 GJB2P29033 226 aa23.46■■□□□ 1.35
LIMS2-207ENST00000409808 CCDC152Q4G0S7 254 aa23.46■■□□□ 1.35
LIMS2-207ENST00000409808 DDX46Q7L014 1031 aaKnown RBP23.46■■□□□ 1.35
LIMS2-207ENST00000409808 PROM2Q8N271 834 aa23.46■■□□□ 1.35
LIMS2-207ENST00000409808 MAP4K1Q92918 833 aa23.46■■□□□ 1.35
LIMS2-207ENST00000409808 AKAP2Q9Y2D5 859 aa23.46■■□□□ 1.35
LIMS2-207ENST00000409808 TAF1P21675 1872 aa23.46■■□□□ 1.35
LIMS2-207ENST00000409808 GTF2E1P29083 439 aaPredicted RBP23.45■■□□□ 1.35
LIMS2-207ENST00000409808 VGLL2Q8N8G2 317 aa23.45■■□□□ 1.35
LIMS2-207ENST00000409808 ALDH8A1Q9H2A2 487 aaPredicted RBP23.45■■□□□ 1.35
LIMS2-207ENST00000409808 ATP2B3Q16720 1220 aa23.45■■□□□ 1.34
LIMS2-207ENST00000409808 ABCC12Q96J65 1359 aa23.45■■□□□ 1.34
LIMS2-207ENST00000409808 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.44■■□□□ 1.34
LIMS2-207ENST00000409808 A0A0D9SFI3 127 aa23.44■■□□□ 1.34
LIMS2-207ENST00000409808 RXRBP28702 533 aa23.44■■□□□ 1.34
LIMS2-207ENST00000409808 MTMR6Q9Y217 621 aa23.44■■□□□ 1.34
LIMS2-207ENST00000409808 CASZ1Q86V15 1759 aa23.44■■□□□ 1.34
LIMS2-207ENST00000409808 SNAP23O00161 211 aa23.44■■□□□ 1.34
LIMS2-207ENST00000409808 ANKRD1Q15327 319 aa23.44■■□□□ 1.34
LIMS2-207ENST00000409808 GORABQ5T7V8 394 aa23.44■■□□□ 1.34
LIMS2-207ENST00000409808 RNF20Q5VTR2 975 aa23.44■■□□□ 1.34
LIMS2-207ENST00000409808 CCDC83Q8IWF9 413 aa23.44■■□□□ 1.34
LIMS2-207ENST00000409808 GOLIM4O00461 696 aa23.43■■□□□ 1.34
LIMS2-207ENST00000409808 ADCK5Q3MIX3 580 aa23.43■■□□□ 1.34
LIMS2-207ENST00000409808 CREB3L3Q68CJ9 461 aa23.43■■□□□ 1.34
LIMS2-207ENST00000409808 NBPF5PQ86XG9 351 aaPredicted RBP23.43■■□□□ 1.34
LIMS2-207ENST00000409808 RBM8AQ9Y5S9 174 aaKnown RBP23.43■■□□□ 1.34
LIMS2-207ENST00000409808 UBR3Q6ZT12 1888 aa23.43■■□□□ 1.34
LIMS2-207ENST00000409808 IFIT1P09914 478 aaKnown RBP23.43■■□□□ 1.34
LIMS2-207ENST00000409808 MPHOSPH8Q99549 860 aa23.43■■□□□ 1.34
LIMS2-207ENST00000409808 PDCL3Q9H2J4 239 aa23.43■■□□□ 1.34
LIMS2-207ENST00000409808 RGS17Q9UGC6 210 aaPredicted RBP23.43■■□□□ 1.34
LIMS2-207ENST00000409808 R3HCC1Q9Y3T6 440 aaKnown RBP23.43■■□□□ 1.34
LIMS2-207ENST00000409808 TAF5LO75529 589 aa23.42■■□□□ 1.34
LIMS2-207ENST00000409808 PDE8BO95263 885 aa23.42■■□□□ 1.34
LIMS2-207ENST00000409808 LARGE1O95461 756 aa23.42■■□□□ 1.34
LIMS2-207ENST00000409808 TXNRD1Q16881 649 aa23.42■■□□□ 1.34
LIMS2-207ENST00000409808 LRP5O75197 1615 aa23.42■■□□□ 1.34
LIMS2-207ENST00000409808 PDCP20941 246 aa23.42■■□□□ 1.34
LIMS2-207ENST00000409808 KIAA2012Q0VF49 1180 aa23.42■■□□□ 1.34
LIMS2-207ENST00000409808 SLC27A3Q5K4L6 730 aa23.42■■□□□ 1.34
LIMS2-207ENST00000409808 RGL2O15211 777 aa23.41■■□□□ 1.34
LIMS2-207ENST00000409808 HSP90B1P14625 803 aaKnown RBP23.41■■□□□ 1.34
LIMS2-207ENST00000409808 CPA1P15085 419 aa23.41■■□□□ 1.34
LIMS2-207ENST00000409808 KCNJ4P48050 445 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms