RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 VGLL2Q8N8G2 317 aa16.99■□□□□ 0.31
LIMS2-206ENST00000409754 EDC3Q96F86 508 aaKnown RBP16.99■□□□□ 0.31
LIMS2-206ENST00000409754 FAM227BQ96M60 508 aa16.99■□□□□ 0.31
LIMS2-206ENST00000409754 BRIP1Q9BX63 1249 aa16.99■□□□□ 0.31
LIMS2-206ENST00000409754 MED23Q9ULK4 1368 aa16.98■□□□□ 0.31
LIMS2-206ENST00000409754 MROH5Q6ZUA9 1318 aa16.98■□□□□ 0.31
LIMS2-206ENST00000409754 IFIT1P09914 478 aaKnown RBP16.98■□□□□ 0.31
LIMS2-206ENST00000409754 TPTE2Q6XPS3 522 aa16.98■□□□□ 0.31
LIMS2-206ENST00000409754 KBTBD3Q8NAB2 608 aa16.98■□□□□ 0.31
LIMS2-206ENST00000409754 WWC3Q9ULE0 1092 aa16.98■□□□□ 0.31
LIMS2-206ENST00000409754 SLX4Q8IY92 1834 aa16.98■□□□□ 0.31
LIMS2-206ENST00000409754 SPEF2Q9C093 1822 aa16.98■□□□□ 0.31
LIMS2-206ENST00000409754 ARFGEF1Q9Y6D6 1849 aa16.98■□□□□ 0.31
LIMS2-206ENST00000409754 CCDC171Q6TFL3 1326 aa16.97■□□□□ 0.31
LIMS2-206ENST00000409754 A0A0D9SFI3 127 aa16.97■□□□□ 0.31
LIMS2-206ENST00000409754 SPRYD3Q8NCJ5 442 aa16.97■□□□□ 0.31
LIMS2-206ENST00000409754 NYXQ9GZU5 481 aa16.97■□□□□ 0.31
LIMS2-206ENST00000409754 PAG1Q9NWQ8 432 aa16.97■□□□□ 0.31
LIMS2-206ENST00000409754 PDE8BO95263 885 aa16.96■□□□□ 0.31
LIMS2-206ENST00000409754 ADORA1P30542 326 aa16.96■□□□□ 0.31
LIMS2-206ENST00000409754 CRY2Q49AN0 593 aa16.96■□□□□ 0.31
LIMS2-206ENST00000409754 SLC10A5Q5PT55 438 aa16.96■□□□□ 0.31
LIMS2-206ENST00000409754 TTC39AQ5SRH9 613 aa16.96■□□□□ 0.31
LIMS2-206ENST00000409754 GORABQ5T7V8 394 aa16.96■□□□□ 0.31
LIMS2-206ENST00000409754 YBX3P16989 372 aaKnown RBP eCLIP16.96■□□□□ 0.3
LIMS2-206ENST00000409754 DDIT3P35638 169 aa16.96■□□□□ 0.3
LIMS2-206ENST00000409754 MCM2P49736 904 aa16.96■□□□□ 0.3
LIMS2-206ENST00000409754 TGFB2P61812 414 aa16.96■□□□□ 0.3
LIMS2-206ENST00000409754 ST5P78524 1137 aa16.96■□□□□ 0.3
LIMS2-206ENST00000409754 PTH1RQ03431 593 aa16.96■□□□□ 0.3
LIMS2-206ENST00000409754 NBR1Q14596 966 aa16.96■□□□□ 0.3
LIMS2-206ENST00000409754 DDX46Q7L014 1031 aaKnown RBP16.96■□□□□ 0.3
LIMS2-206ENST00000409754 KCNB2Q92953 911 aa16.96■□□□□ 0.3
LIMS2-206ENST00000409754 CHMP5Q9NZZ3 219 aa16.96■□□□□ 0.3
LIMS2-206ENST00000409754 NDUFB9Q9Y6M9 179 aa16.96■□□□□ 0.3
LIMS2-206ENST00000409754 GOLIM4O00461 696 aa16.95■□□□□ 0.3
LIMS2-206ENST00000409754 SRGNP10124 158 aa16.95■□□□□ 0.3
LIMS2-206ENST00000409754 IGHMBP2P38935 993 aaKnown RBP16.95■□□□□ 0.3
LIMS2-206ENST00000409754 NEK4P51957 841 aa16.95■□□□□ 0.3
LIMS2-206ENST00000409754 SF3B3Q15393 1217 aaKnown RBP16.95■□□□□ 0.3
LIMS2-206ENST00000409754 MAP4K1Q92918 833 aa16.95■□□□□ 0.3
LIMS2-206ENST00000409754 ZNF512BQ96KM6 892 aaPredicted RBP16.95■□□□□ 0.3
LIMS2-206ENST00000409754 MPHOSPH8Q99549 860 aa16.95■□□□□ 0.3
LIMS2-206ENST00000409754 SEC31BQ9NQW1 1179 aa16.95■□□□□ 0.3
LIMS2-206ENST00000409754 SNX14Q9Y5W7 946 aa16.95■□□□□ 0.3
LIMS2-206ENST00000409754 PUM3Q15397 648 aaKnown RBP16.94■□□□□ 0.3
LIMS2-206ENST00000409754 C2CD5Q86YS7 1000 aa16.94■□□□□ 0.3
LIMS2-206ENST00000409754 CIZ1Q9ULV3 898 aaPredicted RBP16.94■□□□□ 0.3
LIMS2-206ENST00000409754 HSP90AA1P07900 732 aaKnown RBP16.93■□□□□ 0.3
LIMS2-206ENST00000409754 FGFR2P21802 821 aa16.93■□□□□ 0.3
LIMS2-206ENST00000409754 NFKBIBQ15653 356 aa16.93■□□□□ 0.3
LIMS2-206ENST00000409754 LPIN2Q92539 896 aa16.93■□□□□ 0.3
LIMS2-206ENST00000409754 CDC5LQ99459 802 aaKnown RBP16.93■□□□□ 0.3
LIMS2-206ENST00000409754 NECTIN1Q15223 517 aa16.92■□□□□ 0.3
LIMS2-206ENST00000409754 LRRFIP1Q32MZ4 808 aaKnown RBP16.92■□□□□ 0.3
LIMS2-206ENST00000409754 MCMDC2Q4G0Z9 681 aa16.92■□□□□ 0.3
LIMS2-206ENST00000409754 RBM8AQ9Y5S9 174 aaKnown RBP16.92■□□□□ 0.3
LIMS2-206ENST00000409754 SNED1Q8TER0 1413 aa16.92■□□□□ 0.3
LIMS2-206ENST00000409754 GTF2E1P29083 439 aaPredicted RBP16.92■□□□□ 0.3
LIMS2-206ENST00000409754 PRPF40BQ6NWY9 871 aaKnown RBP16.92■□□□□ 0.3
LIMS2-206ENST00000409754 ZNF589Q86UQ0 364 aaPredicted RBP16.92■□□□□ 0.3
LIMS2-206ENST00000409754 RASEFQ8IZ41 740 aa16.92■□□□□ 0.3
LIMS2-206ENST00000409754 HELLSQ9NRZ9 838 aa16.92■□□□□ 0.3
LIMS2-206ENST00000409754 LRRC37AA6NMS7 1700 aa16.91■□□□□ 0.3
LIMS2-206ENST00000409754 ARAP2Q8WZ64 1704 aa16.91■□□□□ 0.3
LIMS2-206ENST00000409754 NPHP1O15259 732 aa16.91■□□□□ 0.3
LIMS2-206ENST00000409754 TAF5LO75529 589 aa16.91■□□□□ 0.3
LIMS2-206ENST00000409754 PDE6BP35913 854 aa16.91■□□□□ 0.3
LIMS2-206ENST00000409754 RNF113AO15541 343 aaKnown RBP16.9■□□□□ 0.3
LIMS2-206ENST00000409754 UQCRFS1P1P0C7P4 283 aa16.9■□□□□ 0.3
LIMS2-206ENST00000409754 SLC5A1P13866 664 aa16.9■□□□□ 0.3
LIMS2-206ENST00000409754 ZKSCAN1P17029 563 aaPredicted RBP16.9■□□□□ 0.3
LIMS2-206ENST00000409754 FKBP4Q02790 459 aaKnown RBP eCLIP16.9■□□□□ 0.3
LIMS2-206ENST00000409754 ZMYM1Q5SVZ6 1142 aa16.9■□□□□ 0.3
LIMS2-206ENST00000409754 TM6SF1Q9BZW5 370 aa16.9■□□□□ 0.3
LIMS2-206ENST00000409754 ZFYP08048 801 aaPredicted RBP16.89■□□□□ 0.29
LIMS2-206ENST00000409754 ARID4AP29374 1257 aaPredicted RBP16.89■□□□□ 0.29
LIMS2-206ENST00000409754 HOXA10P31260 410 aaPredicted RBP16.89■□□□□ 0.29
LIMS2-206ENST00000409754 KCNJ4P48050 445 aa16.89■□□□□ 0.29
LIMS2-206ENST00000409754 SCARF1Q14162 830 aa16.89■□□□□ 0.29
LIMS2-206ENST00000409754 RNF20Q5VTR2 975 aa16.89■□□□□ 0.29
LIMS2-206ENST00000409754 CREB3L3Q68CJ9 461 aa16.89■□□□□ 0.29
LIMS2-206ENST00000409754 ANKRD18AQ8IVF6 992 aa16.89■□□□□ 0.29
LIMS2-206ENST00000409754 LTBP1Q14766 1721 aa16.89■□□□□ 0.29
LIMS2-206ENST00000409754 FER1L6Q2WGJ9 1857 aa16.89■□□□□ 0.29
LIMS2-206ENST00000409754 H0YIN7 160 aa16.88■□□□□ 0.29
LIMS2-206ENST00000409754 MCAMP43121 646 aa16.88■□□□□ 0.29
LIMS2-206ENST00000409754 ZAP70P43403 619 aa16.88■□□□□ 0.29
LIMS2-206ENST00000409754 CCDC102BQ68D86 513 aa16.88■□□□□ 0.29
LIMS2-206ENST00000409754 STYK1Q6J9G0 422 aa16.88■□□□□ 0.29
LIMS2-206ENST00000409754 OLFM4Q6UX06 510 aa16.88■□□□□ 0.29
LIMS2-206ENST00000409754 HELBQ8NG08 1087 aaPredicted RBP16.88■□□□□ 0.29
LIMS2-206ENST00000409754 NLRP3Q96P20 1036 aa16.88■□□□□ 0.29
LIMS2-206ENST00000409754 UPF3BQ9BZI7 483 aaKnown RBP16.88■□□□□ 0.29
LIMS2-206ENST00000409754 HMG20BQ9P0W2 317 aa16.88■□□□□ 0.29
LIMS2-206ENST00000409754 SLC27A2O14975 620 aa16.88■□□□□ 0.29
LIMS2-206ENST00000409754 CHGBP05060 677 aa16.88■□□□□ 0.29
LIMS2-206ENST00000409754 NPR1P16066 1061 aa16.88■□□□□ 0.29
LIMS2-206ENST00000409754 CHRNDQ07001 517 aa16.88■□□□□ 0.29
LIMS2-206ENST00000409754 MASTLQ96GX5 879 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms