RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 FPGT-TNNI3KV9GXZ4 949 aa20.49■□□□□ 0.87
SUMO1-208ENST00000409627 TIAM2Q8IVF5 1701 aa20.48■□□□□ 0.87
SUMO1-208ENST00000409627 A0A1B0GUL7 405 aa20.48■□□□□ 0.87
SUMO1-208ENST00000409627 IFIT1P09914 478 aaKnown RBP20.48■□□□□ 0.87
SUMO1-208ENST00000409627 IARSP41252 1262 aaKnown RBP20.48■□□□□ 0.87
SUMO1-208ENST00000409627 GPR101Q96P66 508 aaPredicted RBP20.48■□□□□ 0.87
SUMO1-208ENST00000409627 ZC3H12CQ9C0D7 883 aaKnown RBP20.48■□□□□ 0.87
SUMO1-208ENST00000409627 PPP4R2Q9NY27 417 aa20.48■□□□□ 0.87
SUMO1-208ENST00000409627 PPIP5K2O43314 1243 aa20.47■□□□□ 0.87
SUMO1-208ENST00000409627 LMNB1P20700 586 aa20.47■□□□□ 0.87
SUMO1-208ENST00000409627 KLRK1P26718 216 aa20.47■□□□□ 0.87
SUMO1-208ENST00000409627 PRELPP51888 382 aa20.47■□□□□ 0.87
SUMO1-208ENST00000409627 CLASRPQ8N2M8 674 aaKnown RBP20.47■□□□□ 0.87
SUMO1-208ENST00000409627 IL1RAPL2Q9NP60 686 aa20.47■□□□□ 0.87
SUMO1-208ENST00000409627 COL4A5P29400 1685 aa20.47■□□□□ 0.87
SUMO1-208ENST00000409627 AOC3Q16853 763 aa20.46■□□□□ 0.87
SUMO1-208ENST00000409627 TXNRD3Q86VQ6 643 aa20.46■□□□□ 0.87
SUMO1-208ENST00000409627 CCDC136Q96JN2 1154 aa20.46■□□□□ 0.87
SUMO1-208ENST00000409627 CHD4Q14839 1912 aa20.46■□□□□ 0.87
SUMO1-208ENST00000409627 MYH13Q9UKX3 1938 aa20.46■□□□□ 0.87
SUMO1-208ENST00000409627 KDM2BQ8NHM5 1336 aa20.46■□□□□ 0.87
SUMO1-208ENST00000409627 PSME4Q14997 1843 aa20.46■□□□□ 0.87
SUMO1-208ENST00000409627 GOLGB1Q14789 3259 aaKnown RBP20.45■□□□□ 0.86
SUMO1-208ENST00000409627 RIMBP2O15034 1052 aa20.45■□□□□ 0.86
SUMO1-208ENST00000409627 TIMM10P62072 90 aa20.45■□□□□ 0.86
SUMO1-208ENST00000409627 LARGE2Q8N3Y3 721 aa20.45■□□□□ 0.86
SUMO1-208ENST00000409627 EAF2Q96CJ1 260 aaPredicted RBP20.45■□□□□ 0.86
SUMO1-208ENST00000409627 SMARCA5O60264 1052 aaPredicted RBP20.44■□□□□ 0.86
SUMO1-208ENST00000409627 ANKRD45Q5TZF3 282 aa20.44■□□□□ 0.86
SUMO1-208ENST00000409627 CENPQQ7L2Z9 268 aaPredicted RBP20.44■□□□□ 0.86
SUMO1-208ENST00000409627 ZNF804AQ7Z570 1209 aa20.44■□□□□ 0.86
SUMO1-208ENST00000409627 AACSQ86V21 672 aa20.44■□□□□ 0.86
SUMO1-208ENST00000409627 XAGE2Q96GT9 111 aa20.44■□□□□ 0.86
SUMO1-208ENST00000409627 NEUROD6Q96NK8 337 aa20.44■□□□□ 0.86
SUMO1-208ENST00000409627 ADORA1P30542 326 aa20.43■□□□□ 0.86
SUMO1-208ENST00000409627 CAVIN4Q5BKX8 364 aa20.43■□□□□ 0.86
SUMO1-208ENST00000409627 FAM84BQ96KN1 310 aaPredicted RBP20.43■□□□□ 0.86
SUMO1-208ENST00000409627 COA1Q9GZY4 146 aa20.43■□□□□ 0.86
SUMO1-208ENST00000409627 ZBTB47Q9UFB7 747 aaPredicted RBP20.43■□□□□ 0.86
SUMO1-208ENST00000409627 ZNF646O15015 1829 aaPredicted RBP20.42■□□□□ 0.86
SUMO1-208ENST00000409627 HIBADHP31937 336 aaKnown RBP20.42■□□□□ 0.86
SUMO1-208ENST00000409627 GYG1P46976 350 aa20.42■□□□□ 0.86
SUMO1-208ENST00000409627 FBXO33Q7Z6M2 555 aa20.42■□□□□ 0.86
SUMO1-208ENST00000409627 NIM1KQ8IY84 436 aa20.42■□□□□ 0.86
SUMO1-208ENST00000409627 JDP2Q8WYK2 163 aa20.42■□□□□ 0.86
SUMO1-208ENST00000409627 CCDC8Q9H0W5 538 aaPredicted RBP20.42■□□□□ 0.86
SUMO1-208ENST00000409627 DBNLQ9UJU6 430 aaKnown RBP20.42■□□□□ 0.86
SUMO1-208ENST00000409627 SCN9AQ15858 1988 aa20.41■□□□□ 0.86
SUMO1-208ENST00000409627 IFIT2P09913 472 aaKnown RBP20.41■□□□□ 0.86
SUMO1-208ENST00000409627 NUCB1Q02818 461 aa20.41■□□□□ 0.86
SUMO1-208ENST00000409627 B4GALNT3Q6L9W6 998 aa20.41■□□□□ 0.86
SUMO1-208ENST00000409627 DBNDD2Q9BQY9 259 aa20.41■□□□□ 0.86
SUMO1-208ENST00000409627 RNF181Q9P0P0 153 aa20.41■□□□□ 0.86
SUMO1-208ENST00000409627 G3V3G9 751 aa20.4■□□□□ 0.86
SUMO1-208ENST00000409627 ZBTB22O15209 634 aa20.4■□□□□ 0.86
SUMO1-208ENST00000409627 ECE2O60344 883 aa20.4■□□□□ 0.86
SUMO1-208ENST00000409627 IL1R1P14778 569 aa20.4■□□□□ 0.86
SUMO1-208ENST00000409627 BCAMP50895 628 aa20.4■□□□□ 0.86
SUMO1-208ENST00000409627 DOK7Q18PE1 504 aa20.4■□□□□ 0.86
SUMO1-208ENST00000409627 DCAF8Q5TAQ9 597 aa20.4■□□□□ 0.86
SUMO1-208ENST00000409627 C9orf131Q5VYM1 1079 aa20.4■□□□□ 0.86
SUMO1-208ENST00000409627 PODNQ7Z5L7 613 aa20.4■□□□□ 0.86
SUMO1-208ENST00000409627 CHD1LQ86WJ1 897 aa20.4■□□□□ 0.86
SUMO1-208ENST00000409627 VPS37DQ86XT2 251 aa20.4■□□□□ 0.86
SUMO1-208ENST00000409627 DBNDD1Q9H9R9 158 aa20.4■□□□□ 0.86
SUMO1-208ENST00000409627 CD209Q9NNX6 404 aa20.4■□□□□ 0.86
SUMO1-208ENST00000409627 TLR7Q9NYK1 1049 aaKnown RBP20.4■□□□□ 0.86
SUMO1-208ENST00000409627 ZC3H4Q9UPT8 1303 aaKnown RBP20.39■□□□□ 0.85
SUMO1-208ENST00000409627 PHKA1P46020 1223 aa20.39■□□□□ 0.85
SUMO1-208ENST00000409627 GORABQ5T7V8 394 aa20.39■□□□□ 0.85
SUMO1-208ENST00000409627 CCDC102BQ68D86 513 aa20.39■□□□□ 0.85
SUMO1-208ENST00000409627 ZNRF3Q9ULT6 936 aa20.39■□□□□ 0.85
SUMO1-208ENST00000409627 TDRD7Q8NHU6 1098 aaKnown RBP20.38■□□□□ 0.85
SUMO1-208ENST00000409627 LNPKQ9C0E8 428 aa20.38■□□□□ 0.85
SUMO1-208ENST00000409627 GNL3LQ9NVN8 582 aaKnown RBP20.38■□□□□ 0.85
SUMO1-208ENST00000409627 AKAP11Q9UKA4 1901 aa20.37■□□□□ 0.85
SUMO1-208ENST00000409627 YDJCA8MPS7 323 aa20.37■□□□□ 0.85
SUMO1-208ENST00000409627 FZD9O00144 591 aa20.37■□□□□ 0.85
SUMO1-208ENST00000409627 CCDC158Q5M9N0 1113 aa20.37■□□□□ 0.85
SUMO1-208ENST00000409627 ZNF512BQ96KM6 892 aaPredicted RBP20.37■□□□□ 0.85
SUMO1-208ENST00000409627 BCL11AQ9H165 835 aa20.37■□□□□ 0.85
SUMO1-208ENST00000409627 SALL3Q9BXA9 1300 aa20.36■□□□□ 0.85
SUMO1-208ENST00000409627 SEMA3EO15041 775 aa20.36■□□□□ 0.85
SUMO1-208ENST00000409627 UQCRFS1P1P0C7P4 283 aa20.36■□□□□ 0.85
SUMO1-208ENST00000409627 ARID4AP29374 1257 aaPredicted RBP20.36■□□□□ 0.85
SUMO1-208ENST00000409627 TTC39AQ5SRH9 613 aa20.35■□□□□ 0.85
SUMO1-208ENST00000409627 C16orf71Q8IYS4 520 aaPredicted RBP20.35■□□□□ 0.85
SUMO1-208ENST00000409627 COL1A1P02452 1464 aaPredicted RBP20.35■□□□□ 0.85
SUMO1-208ENST00000409627 PDS5AQ29RF7 1337 aaKnown RBP20.34■□□□□ 0.85
SUMO1-208ENST00000409627 EIF6P56537 245 aaKnown RBP20.34■□□□□ 0.85
SUMO1-208ENST00000409627 GPATCH3Q96I76 525 aa20.34■□□□□ 0.85
SUMO1-208ENST00000409627 DENND2AQ9ULE3 1009 aa20.34■□□□□ 0.85
SUMO1-208ENST00000409627 TTC41PQ6P2S7 1318 aa20.33■□□□□ 0.85
SUMO1-208ENST00000409627 FAM205AQ6ZU69 1335 aa20.33■□□□□ 0.85
SUMO1-208ENST00000409627 FRAT2O75474 233 aaPredicted RBP20.33■□□□□ 0.85
SUMO1-208ENST00000409627 MX1P20591 662 aa20.33■□□□□ 0.85
SUMO1-208ENST00000409627 RASGRF1Q13972 1273 aa20.33■□□□□ 0.85
SUMO1-208ENST00000409627 OTUD7AQ8TE49 926 aaPredicted RBP20.33■□□□□ 0.85
SUMO1-208ENST00000409627 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.33■□□□□ 0.85
SUMO1-208ENST00000409627 ECHDC1Q9NTX5 307 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms