RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 RBM10P98175 930 aaKnown RBP28.64■■■□□ 2.18
SPIRE1-202ENST00000409402 RRAGBQ5VZM2 374 aa28.64■■■□□ 2.18
SPIRE1-202ENST00000409402 ZNF790Q6PG37 636 aa28.64■■■□□ 2.18
SPIRE1-202ENST00000409402 TSPYL6Q8N831 410 aa28.64■■■□□ 2.18
SPIRE1-202ENST00000409402 ESPNB1AK53 854 aa28.63■■■□□ 2.17
SPIRE1-202ENST00000409402 CAVIN2O95810 425 aa28.63■■■□□ 2.17
SPIRE1-202ENST00000409402 TBC1D32Q96NH3 1257 aa28.63■■■□□ 2.17
SPIRE1-202ENST00000409402 ORAI2Q96SN7 254 aa28.63■■■□□ 2.17
SPIRE1-202ENST00000409402 MMRN2Q9H8L6 949 aa28.63■■■□□ 2.17
SPIRE1-202ENST00000409402 URI1O94763 535 aaPredicted RBP28.63■■■□□ 2.17
SPIRE1-202ENST00000409402 KRT13P13646 458 aa28.63■■■□□ 2.17
SPIRE1-202ENST00000409402 TMCO5BA8MYB1 307 aa28.63■■■□□ 2.17
SPIRE1-202ENST00000409402 ISM2Q6H9L7 571 aa28.63■■■□□ 2.17
SPIRE1-202ENST00000409402 CEP85Q6P2H3 762 aa28.63■■■□□ 2.17
SPIRE1-202ENST00000409402 UFL1O94874 794 aa28.63■■■□□ 2.17
SPIRE1-202ENST00000409402 PCDHB15Q9Y5E8 787 aa28.63■■■□□ 2.17
SPIRE1-202ENST00000409402 FERMT1Q9BQL6 677 aa28.62■■■□□ 2.17
SPIRE1-202ENST00000409402 ZSCAN30Q86W11 494 aa28.62■■■□□ 2.17
SPIRE1-202ENST00000409402 SH2D4AQ9H788 454 aa28.62■■■□□ 2.17
SPIRE1-202ENST00000409402 ARHGEF10O15013 1369 aa28.62■■■□□ 2.17
SPIRE1-202ENST00000409402 TBC1D5Q92609 795 aa28.62■■■□□ 2.17
SPIRE1-202ENST00000409402 BABAM1Q9NWV8 329 aa28.62■■■□□ 2.17
SPIRE1-202ENST00000409402 SH3TC1Q8TE82 1336 aa28.62■■■□□ 2.17
SPIRE1-202ENST00000409402 KRT24Q2M2I5 525 aa28.61■■■□□ 2.17
SPIRE1-202ENST00000409402 GJA3Q9Y6H8 435 aa28.61■■■□□ 2.17
SPIRE1-202ENST00000409402 PHACTR2O75167 634 aa28.61■■■□□ 2.17
SPIRE1-202ENST00000409402 CA8P35219 290 aa28.61■■■□□ 2.17
SPIRE1-202ENST00000409402 AFMP43652 599 aa28.61■■■□□ 2.17
SPIRE1-202ENST00000409402 TAOK3Q9H2K8 898 aa28.61■■■□□ 2.17
SPIRE1-202ENST00000409402 GOPCQ9HD26 462 aa28.61■■■□□ 2.17
SPIRE1-202ENST00000409402 SBNO2Q9Y2G9 1366 aa28.61■■■□□ 2.17
SPIRE1-202ENST00000409402 NOP2P46087 812 aaKnown RBP28.6■■■□□ 2.17
SPIRE1-202ENST00000409402 ZNF165P49910 485 aa28.6■■■□□ 2.17
SPIRE1-202ENST00000409402 CCDC113Q9H0I3 377 aa28.6■■■□□ 2.17
SPIRE1-202ENST00000409402 USP25Q9UHP3 1055 aa28.6■■■□□ 2.17
SPIRE1-202ENST00000409402 DYDC1Q8WWB3 177 aa28.6■■■□□ 2.17
SPIRE1-202ENST00000409402 JAG2Q9Y219 1238 aa28.6■■■□□ 2.17
SPIRE1-202ENST00000409402 EDC4Q6P2E9 1401 aaKnown RBP28.6■■■□□ 2.17
SPIRE1-202ENST00000409402 N4BP3O15049 544 aa28.6■■■□□ 2.17
SPIRE1-202ENST00000409402 NCBP1Q09161 790 aaKnown RBP28.6■■■□□ 2.17
SPIRE1-202ENST00000409402 TESK2Q96S53 571 aa28.59■■■□□ 2.17
SPIRE1-202ENST00000409402 FAM98CQ17RN3 349 aaKnown RBP28.59■■■□□ 2.17
SPIRE1-202ENST00000409402 FAM89AQ96GI7 184 aa28.59■■■□□ 2.17
SPIRE1-202ENST00000409402 CARD14Q9BXL6 1004 aa28.59■■■□□ 2.17
SPIRE1-202ENST00000409402 TMCO3Q6UWJ1 677 aa28.59■■■□□ 2.17
SPIRE1-202ENST00000409402 PIK3C2GO75747 1445 aa28.59■■■□□ 2.17
SPIRE1-202ENST00000409402 IFFO1Q0D2I5 559 aa28.59■■■□□ 2.17
SPIRE1-202ENST00000409402 TRIM75PA6NK02 468 aa28.58■■■□□ 2.17
SPIRE1-202ENST00000409402 NAA15Q9BXJ9 866 aaKnown RBP28.58■■■□□ 2.17
SPIRE1-202ENST00000409402 ITGA6P23229 1130 aa28.58■■■□□ 2.17
SPIRE1-202ENST00000409402 GNA11P29992 359 aa28.58■■■□□ 2.17
SPIRE1-202ENST00000409402 KRT2P35908 639 aa28.58■■■□□ 2.17
SPIRE1-202ENST00000409402 DCTPP1Q9H773 170 aa28.58■■■□□ 2.17
SPIRE1-202ENST00000409402 SYNCQ9H7C4 482 aa28.58■■■□□ 2.17
SPIRE1-202ENST00000409402 METTL22Q9BUU2 404 aaPredicted RBP28.57■■■□□ 2.16
SPIRE1-202ENST00000409402 GGA1Q9UJY5 639 aa28.57■■■□□ 2.16
SPIRE1-202ENST00000409402 HIBADHP31937 336 aaKnown RBP28.57■■■□□ 2.16
SPIRE1-202ENST00000409402 KRT79Q5XKE5 535 aa28.57■■■□□ 2.16
SPIRE1-202ENST00000409402 TEX11Q8IYF3 940 aa28.57■■■□□ 2.16
SPIRE1-202ENST00000409402 PDE8AO60658 829 aa28.57■■■□□ 2.16
SPIRE1-202ENST00000409402 ASIC1P78348 528 aa28.57■■■□□ 2.16
SPIRE1-202ENST00000409402 CCDC171Q6TFL3 1326 aa28.57■■■□□ 2.16
SPIRE1-202ENST00000409402 RAD50Q92878 1312 aa28.56■■■□□ 2.16
SPIRE1-202ENST00000409402 IFI16Q16666 785 aaKnown RBP28.56■■■□□ 2.16
SPIRE1-202ENST00000409402 TCHPQ9BT92 498 aa28.56■■■□□ 2.16
SPIRE1-202ENST00000409402 MRPS27Q92552 414 aaKnown RBP28.56■■■□□ 2.16
SPIRE1-202ENST00000409402 CCDC87Q9NVE4 849 aa28.56■■■□□ 2.16
SPIRE1-202ENST00000409402 PRPF4BQ13523 1007 aaKnown RBP28.56■■■□□ 2.16
SPIRE1-202ENST00000409402 SPAG5Q96R06 1193 aa28.56■■■□□ 2.16
SPIRE1-202ENST00000409402 CTAGE1Q96RT6 745 aa28.56■■■□□ 2.16
SPIRE1-202ENST00000409402 PUM3Q15397 648 aaKnown RBP28.56■■■□□ 2.16
SPIRE1-202ENST00000409402 USP21Q9UK80 565 aa28.55■■■□□ 2.16
SPIRE1-202ENST00000409402 GOLGA6L9A6NEM1 432 aa28.55■■■□□ 2.16
SPIRE1-202ENST00000409402 RBM28Q9NW13 759 aaKnown RBP28.55■■■□□ 2.16
SPIRE1-202ENST00000409402 SLAIN2Q9P270 581 aa28.55■■■□□ 2.16
SPIRE1-202ENST00000409402 MAST3O60307 1309 aa28.55■■■□□ 2.16
SPIRE1-202ENST00000409402 ATP7AQ04656 1500 aa28.55■■■□□ 2.16
SPIRE1-202ENST00000409402 GCOM1H8Y6P7 765 aaPredicted RBP28.54■■■□□ 2.16
SPIRE1-202ENST00000409402 EYA2O00167 538 aa28.54■■■□□ 2.16
SPIRE1-202ENST00000409402 MYZAPP0CAP1 466 aa28.54■■■□□ 2.16
SPIRE1-202ENST00000409402 SLC52A2Q9HAB3 445 aa28.54■■■□□ 2.16
SPIRE1-202ENST00000409402 H0YIN7 160 aa28.54■■■□□ 2.16
SPIRE1-202ENST00000409402 PSMA7O14818 248 aa28.54■■■□□ 2.16
SPIRE1-202ENST00000409402 MBD4O95243 580 aa28.54■■■□□ 2.16
SPIRE1-202ENST00000409402 HOXB7P09629 217 aa28.54■■■□□ 2.16
SPIRE1-202ENST00000409402 PARP1P09874 1014 aaKnown RBP28.54■■■□□ 2.16
SPIRE1-202ENST00000409402 IMPG2Q9BZV3 1241 aa28.54■■■□□ 2.16
SPIRE1-202ENST00000409402 HELLSQ9NRZ9 838 aa28.54■■■□□ 2.16
SPIRE1-202ENST00000409402 HCLS1P14317 486 aaPredicted RBP28.54■■■□□ 2.16
SPIRE1-202ENST00000409402 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.54■■■□□ 2.16
SPIRE1-202ENST00000409402 MAST1Q9Y2H9 1570 aa28.53■■■□□ 2.16
SPIRE1-202ENST00000409402 PRIM1P49642 420 aaKnown RBP28.53■■■□□ 2.16
SPIRE1-202ENST00000409402 SPAG1Q07617 926 aa28.53■■■□□ 2.16
SPIRE1-202ENST00000409402 PICK1Q9NRD5 415 aa28.53■■■□□ 2.16
SPIRE1-202ENST00000409402 ARHGEF12Q9NZN5 1544 aa28.53■■■□□ 2.16
SPIRE1-202ENST00000409402 ACTN2P35609 894 aa28.53■■■□□ 2.16
SPIRE1-202ENST00000409402 CREB3L3Q68CJ9 461 aa28.53■■■□□ 2.16
SPIRE1-202ENST00000409402 MAP3K9P80192 1104 aa28.53■■■□□ 2.16
SPIRE1-202ENST00000409402 TRMT1Q9NXH9 659 aaKnown RBP28.52■■■□□ 2.16
SPIRE1-202ENST00000409402 AKR1B10O60218 316 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms