RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 DACT2Q5SW24 774 aa16.76■□□□□ 0.27
CHRNA1-203ENST00000409219 DBF4Q9UBU7 674 aaPredicted RBP16.76■□□□□ 0.27
CHRNA1-203ENST00000409219 FZD1Q9UP38 647 aa16.76■□□□□ 0.27
CHRNA1-203ENST00000409219 ATP2B4P23634 1241 aa16.75■□□□□ 0.27
CHRNA1-203ENST00000409219 LMOD3Q0VAK6 560 aa16.75■□□□□ 0.27
CHRNA1-203ENST00000409219 IFNL1Q8IU54 200 aa16.75■□□□□ 0.27
CHRNA1-203ENST00000409219 OGFOD1Q8N543 542 aa16.75■□□□□ 0.27
CHRNA1-203ENST00000409219 CCDC85AQ96PX6 553 aaPredicted RBP16.75■□□□□ 0.27
CHRNA1-203ENST00000409219 PTPN22Q9Y2R2 807 aa16.75■□□□□ 0.27
CHRNA1-203ENST00000409219 SSC5DA1L4H1 1573 aa16.75■□□□□ 0.27
CHRNA1-203ENST00000409219 MYO3BQ8WXR4 1341 aa16.74■□□□□ 0.27
CHRNA1-203ENST00000409219 MANSC4A6NHS7 340 aaPredicted RBP16.74■□□□□ 0.27
CHRNA1-203ENST00000409219 IGF2BP3O00425 579 aaKnown RBP eCLIP16.74■□□□□ 0.27
CHRNA1-203ENST00000409219 HOXB7P09629 217 aa16.74■□□□□ 0.27
CHRNA1-203ENST00000409219 EN2P19622 333 aaPredicted RBP16.74■□□□□ 0.27
CHRNA1-203ENST00000409219 ANGEL1Q9UNK9 670 aaKnown RBP16.74■□□□□ 0.27
CHRNA1-203ENST00000409219 TRIOBPQ9H2D6 2365 aa16.74■□□□□ 0.27
CHRNA1-203ENST00000409219 COL1A1P02452 1464 aaPredicted RBP16.74■□□□□ 0.27
CHRNA1-203ENST00000409219 PDE8AO60658 829 aa16.73■□□□□ 0.27
CHRNA1-203ENST00000409219 APOBEC3FQ8IUX4 373 aaKnown RBP16.73■□□□□ 0.27
CHRNA1-203ENST00000409219 ANKRD18AQ8IVF6 992 aa16.73■□□□□ 0.27
CHRNA1-203ENST00000409219 ARMC5Q96C12 935 aa16.73■□□□□ 0.27
CHRNA1-203ENST00000409219 HYPKQ9NX55 129 aa16.73■□□□□ 0.27
CHRNA1-203ENST00000409219 ECM29Q5VYK3 1845 aa16.73■□□□□ 0.27
CHRNA1-203ENST00000409219 HSP90B1P14625 803 aaKnown RBP16.73■□□□□ 0.27
CHRNA1-203ENST00000409219 STRIP1Q5VSL9 837 aa16.73■□□□□ 0.27
CHRNA1-203ENST00000409219 CD99L2Q8TCZ2 262 aa16.73■□□□□ 0.27
CHRNA1-203ENST00000409219 FBXW7Q969H0 707 aa16.73■□□□□ 0.27
CHRNA1-203ENST00000409219 COLQQ9Y215 455 aaPredicted RBP16.73■□□□□ 0.27
CHRNA1-203ENST00000409219 MYH3P11055 1940 aa16.72■□□□□ 0.27
CHRNA1-203ENST00000409219 CEP290O15078 2479 aa16.72■□□□□ 0.27
CHRNA1-203ENST00000409219 PCCAP05165 728 aaPredicted RBP16.72■□□□□ 0.27
CHRNA1-203ENST00000409219 ZBTB48P10074 688 aaPredicted RBP16.72■□□□□ 0.27
CHRNA1-203ENST00000409219 INHBEP58166 350 aa16.72■□□□□ 0.27
CHRNA1-203ENST00000409219 CAP1Q01518 475 aa16.72■□□□□ 0.27
CHRNA1-203ENST00000409219 RIC3Q7Z5B4 369 aa16.72■□□□□ 0.27
CHRNA1-203ENST00000409219 ERO1AQ96HE7 468 aa16.72■□□□□ 0.27
CHRNA1-203ENST00000409219 ZBED3Q96IU2 234 aaPredicted RBP16.72■□□□□ 0.27
CHRNA1-203ENST00000409219 CLMNQ96JQ2 1002 aa16.72■□□□□ 0.27
CHRNA1-203ENST00000409219 LAS1LQ9Y4W2 734 aaKnown RBP16.72■□□□□ 0.27
CHRNA1-203ENST00000409219 ZEB1P37275 1124 aaPredicted RBP16.71■□□□□ 0.27
CHRNA1-203ENST00000409219 MAP3K11Q16584 847 aa16.71■□□□□ 0.27
CHRNA1-203ENST00000409219 JARID2Q92833 1246 aaPredicted RBP16.71■□□□□ 0.27
CHRNA1-203ENST00000409219 WNK4Q96J92 1243 aa16.71■□□□□ 0.27
CHRNA1-203ENST00000409219 MYD88Q99836 296 aa16.71■□□□□ 0.27
CHRNA1-203ENST00000409219 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.71■□□□□ 0.27
CHRNA1-203ENST00000409219 OTOFQ9HC10 1997 aa16.7■□□□□ 0.26
CHRNA1-203ENST00000409219 GOLGA2Q08379 1002 aa16.7■□□□□ 0.26
CHRNA1-203ENST00000409219 CRHR2Q13324 411 aa16.7■□□□□ 0.26
CHRNA1-203ENST00000409219 CCDC191Q8NCU4 936 aa16.7■□□□□ 0.26
CHRNA1-203ENST00000409219 RANBP2P49792 3224 aaKnown RBP16.7■□□□□ 0.26
CHRNA1-203ENST00000409219 TXNRD3Q86VQ6 643 aa16.69■□□□□ 0.26
CHRNA1-203ENST00000409219 KIAA0825Q8IV33 1275 aa16.69■□□□□ 0.26
CHRNA1-203ENST00000409219 SLC10A4Q96EP9 437 aa16.69■□□□□ 0.26
CHRNA1-203ENST00000409219 ZNF333Q96JL9 665 aa16.69■□□□□ 0.26
CHRNA1-203ENST00000409219 COA1Q9GZY4 146 aa16.69■□□□□ 0.26
CHRNA1-203ENST00000409219 PHAXQ9H814 394 aaKnown RBP16.69■□□□□ 0.26
CHRNA1-203ENST00000409219 EFCC1Q9HA90 598 aa16.69■□□□□ 0.26
CHRNA1-203ENST00000409219 MINPP1Q9UNW1 487 aa16.69■□□□□ 0.26
CHRNA1-203ENST00000409219 MMP14P50281 582 aa16.68■□□□□ 0.26
CHRNA1-203ENST00000409219 CCT4P50991 539 aaKnown RBP16.68■□□□□ 0.26
CHRNA1-203ENST00000409219 NEUROD2Q15784 382 aa16.68■□□□□ 0.26
CHRNA1-203ENST00000409219 DUSP27Q5VZP5 1158 aa16.68■□□□□ 0.26
CHRNA1-203ENST00000409219 CDC5LQ99459 802 aaKnown RBP16.68■□□□□ 0.26
CHRNA1-203ENST00000409219 TRIM35Q9UPQ4 493 aa16.68■□□□□ 0.26
CHRNA1-203ENST00000409219 CTSWP56202 376 aa16.67■□□□□ 0.26
CHRNA1-203ENST00000409219 DEFB129Q9H1M3 183 aa16.67■□□□□ 0.26
CHRNA1-203ENST00000409219 BSDC1Q9NW68 430 aaPredicted RBP16.67■□□□□ 0.26
CHRNA1-203ENST00000409219 CWC25Q9NXE8 425 aaPredicted RBP16.67■□□□□ 0.26
CHRNA1-203ENST00000409219 GJA5P36382 358 aa16.67■□□□□ 0.26
CHRNA1-203ENST00000409219 SP3Q02447 781 aa16.67■□□□□ 0.26
CHRNA1-203ENST00000409219 TMEM106CQ9BVX2 250 aa16.67■□□□□ 0.26
CHRNA1-203ENST00000409219 KLRK1P26718 216 aa16.66■□□□□ 0.26
CHRNA1-203ENST00000409219 TTLL5Q6EMB2 1281 aa16.66■□□□□ 0.26
CHRNA1-203ENST00000409219 CCDC146Q8IYE0 955 aa16.66■□□□□ 0.26
CHRNA1-203ENST00000409219 PTPN18Q99952 460 aa16.66■□□□□ 0.26
CHRNA1-203ENST00000409219 PPP1R12BO60237 982 aaPredicted RBP16.65■□□□□ 0.26
CHRNA1-203ENST00000409219 TTLL11Q8NHH1 800 aa16.65■□□□□ 0.26
CHRNA1-203ENST00000409219 OTUD5Q96G74 571 aa16.65■□□□□ 0.26
CHRNA1-203ENST00000409219 GREM2Q9H772 168 aa16.65■□□□□ 0.26
CHRNA1-203ENST00000409219 ZSWIM8A7E2V4 1837 aa16.64■□□□□ 0.25
CHRNA1-203ENST00000409219 GTF2IP78347 998 aa16.64■□□□□ 0.25
CHRNA1-203ENST00000409219 PCDHAC2Q9Y5I4 1007 aa16.64■□□□□ 0.25
CHRNA1-203ENST00000409219 PPP2R3BQ9Y5P8 575 aa16.64■□□□□ 0.25
CHRNA1-203ENST00000409219 PTCH2Q9Y6C5 1203 aa16.64■□□□□ 0.25
CHRNA1-203ENST00000409219 TESPA1A2RU30 521 aaPredicted RBP16.63■□□□□ 0.25
CHRNA1-203ENST00000409219 UNCXA6NJT0 531 aa16.63■□□□□ 0.25
CHRNA1-203ENST00000409219 H0YGN5 161 aa16.63■□□□□ 0.25
CHRNA1-203ENST00000409219 SLC9C1Q4G0N8 1177 aa16.63■□□□□ 0.25
CHRNA1-203ENST00000409219 OTUD7BQ6GQQ9 843 aa16.63■□□□□ 0.25
CHRNA1-203ENST00000409219 METTL22Q9BUU2 404 aaPredicted RBP16.63■□□□□ 0.25
CHRNA1-203ENST00000409219 MBIPQ9NS73 344 aa16.63■□□□□ 0.25
CHRNA1-203ENST00000409219 LEMD3Q9Y2U8 911 aa16.63■□□□□ 0.25
CHRNA1-203ENST00000409219 ZNF804BA4D1E1 1349 aa16.63■□□□□ 0.25
CHRNA1-203ENST00000409219 DLGAP5Q15398 846 aa16.62■□□□□ 0.25
CHRNA1-203ENST00000409219 MTMR14Q8NCE2 650 aa16.62■□□□□ 0.25
CHRNA1-203ENST00000409219 A0A1B0GUL6 1792 aa16.62■□□□□ 0.25
CHRNA1-203ENST00000409219 CLRN2A0PK11 232 aa16.61■□□□□ 0.25
CHRNA1-203ENST00000409219 NBPF12Q5TAG4 269 aaPredicted RBP16.61■□□□□ 0.25
CHRNA1-203ENST00000409219 CERS5Q8N5B7 392 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms