RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 ARID3AQ99856 593 aa5.77□□□□□ -1.48
SCN3A-203ENST00000409101 BACH1O14867 736 aa5.77□□□□□ -1.49
SCN3A-203ENST00000409101 CRKLP46109 303 aaKnown RBP5.77□□□□□ -1.49
SCN3A-203ENST00000409101 ZYXQ15942 572 aaKnown RBP5.77□□□□□ -1.49
SCN3A-203ENST00000409101 NAP1L4Q99733 375 aaKnown RBP5.77□□□□□ -1.49
SCN3A-203ENST00000409101 RBM27Q9P2N5 1060 aaKnown RBP5.77□□□□□ -1.49
SCN3A-203ENST00000409101 MAGI3Q5TCQ9 1506 aa5.77□□□□□ -1.49
SCN3A-203ENST00000409101 KLF18A0A0U1RQI7 1052 aa5.77□□□□□ -1.49
SCN3A-203ENST00000409101 EYA2O00167 538 aa5.77□□□□□ -1.49
SCN3A-203ENST00000409101 NFKBIBQ15653 356 aa5.77□□□□□ -1.49
SCN3A-203ENST00000409101 BRINP3Q76B58 766 aa5.77□□□□□ -1.49
SCN3A-203ENST00000409101 ARMC9Q7Z3E5 817 aa5.77□□□□□ -1.49
SCN3A-203ENST00000409101 VPS36Q86VN1 386 aa5.77□□□□□ -1.49
SCN3A-203ENST00000409101 METP08581 1390 aa5.77□□□□□ -1.49
SCN3A-203ENST00000409101 TAF5LO75529 589 aa5.77□□□□□ -1.49
SCN3A-203ENST00000409101 KIF4AO95239 1232 aa5.77□□□□□ -1.49
SCN3A-203ENST00000409101 TCP10Q12799 353 aa5.77□□□□□ -1.49
SCN3A-203ENST00000409101 TTC16Q8NEE8 873 aa5.77□□□□□ -1.49
SCN3A-203ENST00000409101 NUP62CLQ9H1M0 184 aa5.77□□□□□ -1.49
SCN3A-203ENST00000409101 PUF60Q9UHX1 559 aaKnown RBP5.77□□□□□ -1.49
SCN3A-203ENST00000409101 LIMCH1Q9UPQ0 1083 aa5.77□□□□□ -1.49
SCN3A-203ENST00000409101 ANKRD62A6NC57 917 aa5.77□□□□□ -1.49
SCN3A-203ENST00000409101 M0QZ92 97 aa5.77□□□□□ -1.49
SCN3A-203ENST00000409101 MBD4O95243 580 aa5.77□□□□□ -1.49
SCN3A-203ENST00000409101 SP4Q02446 784 aa5.77□□□□□ -1.49
SCN3A-203ENST00000409101 TSHZ3Q63HK5 1081 aa5.77□□□□□ -1.49
SCN3A-203ENST00000409101 TEKT1Q969V4 418 aa5.77□□□□□ -1.49
SCN3A-203ENST00000409101 ORC3Q9UBD5 711 aaPredicted RBP5.77□□□□□ -1.49
SCN3A-203ENST00000409101 ZBTB21Q9ULJ3 1066 aa5.77□□□□□ -1.49
SCN3A-203ENST00000409101 PTPDC1A2A3K4 754 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 NOP56O00567 594 aaKnown RBP5.76□□□□□ -1.49
SCN3A-203ENST00000409101 PHACTR2O75167 634 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 GTF2IP78347 998 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 DOK7Q18PE1 504 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 PHACTR3Q96KR7 559 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 UPF3BQ9BZI7 483 aaKnown RBP5.76□□□□□ -1.49
SCN3A-203ENST00000409101 USP40Q9NVE5 1235 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 SERPINB2P05120 415 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 IDEP14735 1019 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 UBA7P41226 1012 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 ANAPC15P60006 121 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 RPS8P62241 208 aaKnown RBP5.76□□□□□ -1.49
SCN3A-203ENST00000409101 GCKRQ14397 625 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 CCDC40Q4G0X9 1142 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 TTC22Q5TAA0 569 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 CACNA2D4Q7Z3S7 1137 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 LPIN2Q92539 896 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 TAF4BQ92750 862 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 GPCPD1Q9NPB8 672 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 RBM28Q9NW13 759 aaKnown RBP5.76□□□□□ -1.49
SCN3A-203ENST00000409101 JCADQ9P266 1359 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 TTC37Q6PGP7 1564 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 WDR17Q8IZU2 1322 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 TCP10L2B9ZVM9 353 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 CCDC93Q567U6 631 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 RNF214Q8ND24 703 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 TSHZ2Q9NRE2 1034 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 TTC41PQ6P2S7 1318 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 PZPP20742 1482 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 LRSAM1Q6UWE0 723 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 XAGE2Q96GT9 111 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 TTF2Q9UNY4 1162 aaKnown RBP5.76□□□□□ -1.49
SCN3A-203ENST00000409101 CNGA1P29973 690 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 CTSWP56202 376 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 NMIQ13287 307 aaPredicted RBP5.76□□□□□ -1.49
SCN3A-203ENST00000409101 SEPT7Q16181 437 aaKnown RBP5.76□□□□□ -1.49
SCN3A-203ENST00000409101 SPOUT1Q5T280 376 aaKnown RBP5.76□□□□□ -1.49
SCN3A-203ENST00000409101 TMC4Q7Z404 712 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 ERCC4Q92889 916 aaPredicted RBP5.76□□□□□ -1.49
SCN3A-203ENST00000409101 TCHPQ9BT92 498 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 CARD14Q9BXL6 1004 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 ARGLU1Q9NWB6 273 aaPredicted RBP5.76□□□□□ -1.49
SCN3A-203ENST00000409101 PRKAG2Q9UGJ0 569 aa5.76□□□□□ -1.49
SCN3A-203ENST00000409101 EPB41L2O43491 1005 aaKnown RBP5.75□□□□□ -1.49
SCN3A-203ENST00000409101 BMP15O95972 392 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 OSBPP22059 807 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 HSPA1LP34931 641 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 FERMT3Q86UX7 667 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 CNNM3Q8NE01 707 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 PAGR1Q9BTK6 254 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 EXOC1Q9NV70 894 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 AATFQ9NY61 560 aaKnown RBP eCLIP5.75□□□□□ -1.49
SCN3A-203ENST00000409101 A2ML1A8K2U0 1454 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 STX6O43752 255 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 TCERG1LQ5VWI1 586 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 KIAA1328Q86T90 577 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 FAM114A1Q8IWE2 563 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 RTL1A6NKG5 1358 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 NEFHP12036 1026 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 KRT13P13646 458 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 GNA11P29992 359 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 USP8P40818 1118 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 KLHL10Q6JEL2 608 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 RTKN2Q8IZC4 609 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 ZNF496Q96IT1 587 aaPredicted RBP5.75□□□□□ -1.49
SCN3A-203ENST00000409101 PKD2L1Q9P0L9 805 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 PIM2Q9P1W9 311 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 A0A1B0GUL7 405 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 PRC1O43663 620 aa5.75□□□□□ -1.49
SCN3A-203ENST00000409101 ZNF354CQ86Y25 554 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms