RNA–Protein interactions for RNA: ENST00000409096.5

CUL3-203, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 2,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-203ENST00000409096 SLC6A14Q9UN76 642 aa4.43□□□□□ -1.7
CUL3-203ENST00000409096 TTF2Q9UNY4 1162 aaKnown RBP4.43□□□□□ -1.7
CUL3-203ENST00000409096 TRIM33Q9UPN9 1127 aa4.43□□□□□ -1.7
CUL3-203ENST00000409096 USP31Q70CQ4 1352 aa4.43□□□□□ -1.7
CUL3-203ENST00000409096 SIN3BO75182 1162 aa4.43□□□□□ -1.7
CUL3-203ENST00000409096 ZNF157P51786 506 aaPredicted RBP4.43□□□□□ -1.7
CUL3-203ENST00000409096 TAF1CQ15572 869 aaPredicted RBP4.43□□□□□ -1.7
CUL3-203ENST00000409096 CEP135Q66GS9 1140 aa4.43□□□□□ -1.7
CUL3-203ENST00000409096 NXPE3Q969Y0 559 aa4.43□□□□□ -1.7
CUL3-203ENST00000409096 SPACA7Q96KW9 195 aa4.43□□□□□ -1.7
CUL3-203ENST00000409096 BCL11AQ9H165 835 aa4.43□□□□□ -1.7
CUL3-203ENST00000409096 MUC3BQ9H195 1237 aa4.43□□□□□ -1.7
CUL3-203ENST00000409096 GGT7Q9UJ14 662 aa4.43□□□□□ -1.7
CUL3-203ENST00000409096 IGF1RP08069 1367 aa4.43□□□□□ -1.7
CUL3-203ENST00000409096 TMEM238LA0A1B0GVL6 79 aa4.42□□□□□ -1.7
CUL3-203ENST00000409096 CELA3AP09093 270 aa4.42□□□□□ -1.7
CUL3-203ENST00000409096 GSTT1P30711 240 aa4.42□□□□□ -1.7
CUL3-203ENST00000409096 FAAP100Q0VG06 881 aa4.42□□□□□ -1.7
CUL3-203ENST00000409096 NEUROD1Q13562 356 aa4.42□□□□□ -1.7
CUL3-203ENST00000409096 PRPF40BQ6NWY9 871 aaKnown RBP4.42□□□□□ -1.7
CUL3-203ENST00000409096 DTHD1Q6ZMT9 781 aa4.42□□□□□ -1.7
CUL3-203ENST00000409096 NUDT8Q8WV74 236 aa4.42□□□□□ -1.7
CUL3-203ENST00000409096 TNFRSF25Q93038 417 aa4.42□□□□□ -1.7
CUL3-203ENST00000409096 PLD4Q96BZ4 506 aa4.42□□□□□ -1.7
CUL3-203ENST00000409096 FRMD6Q96NE9 622 aa4.42□□□□□ -1.7
CUL3-203ENST00000409096 LPIN3Q9BQK8 851 aa4.42□□□□□ -1.7
CUL3-203ENST00000409096 PBX4Q9BYU1 374 aa4.42□□□□□ -1.7
CUL3-203ENST00000409096 SRCIN1Q9C0H9 1055 aa4.42□□□□□ -1.7
CUL3-203ENST00000409096 LACRTQ9GZZ8 138 aa4.42□□□□□ -1.7
CUL3-203ENST00000409096 MAP3K11Q16584 847 aa4.42□□□□□ -1.7
CUL3-203ENST00000409096 SMG9Q9H0W8 520 aaKnown RBP4.42□□□□□ -1.7
CUL3-203ENST00000409096 METTL5Q9NRN9 209 aaKnown RBP4.42□□□□□ -1.7
CUL3-203ENST00000409096 MBIPQ9NS73 344 aa4.42□□□□□ -1.7
CUL3-203ENST00000409096 A0A096LPE4 126 aa4.41□□□□□ -1.7
CUL3-203ENST00000409096 A0A1W2PPZ6 126 aa4.41□□□□□ -1.7
CUL3-203ENST00000409096 PDE2AO00408 941 aaPredicted RBP4.41□□□□□ -1.7
CUL3-203ENST00000409096 PAGE1O75459 146 aa4.41□□□□□ -1.7
CUL3-203ENST00000409096 GHRHP01286 108 aa4.41□□□□□ -1.7
CUL3-203ENST00000409096 ADH6P28332 368 aa4.41□□□□□ -1.7
CUL3-203ENST00000409096 CDC25BP30305 580 aa4.41□□□□□ -1.7
CUL3-203ENST00000409096 NAALADL2Q58DX5 795 aa4.41□□□□□ -1.7
CUL3-203ENST00000409096 ZNF787Q6DD87 383 aa4.41□□□□□ -1.7
CUL3-203ENST00000409096 PSAPL1Q6NUJ1 521 aa4.41□□□□□ -1.7
CUL3-203ENST00000409096 BHLHE41Q9C0J9 482 aaPredicted RBP4.41□□□□□ -1.7
CUL3-203ENST00000409096 EFCC1Q9HA90 598 aa4.41□□□□□ -1.7
CUL3-203ENST00000409096 GIPC1O14908 333 aa4.41□□□□□ -1.7
CUL3-203ENST00000409096 VSIG8P0DPA2 414 aa4.41□□□□□ -1.7
CUL3-203ENST00000409096 ARAFP10398 606 aa4.41□□□□□ -1.7
CUL3-203ENST00000409096 CCDC85BQ15834 202 aaPredicted RBP4.41□□□□□ -1.7
CUL3-203ENST00000409096 GDF6Q6KF10 455 aaPredicted RBP4.41□□□□□ -1.7
CUL3-203ENST00000409096 C8orf86Q6ZUL3 223 aa4.41□□□□□ -1.7
CUL3-203ENST00000409096 USP48Q86UV5 1035 aa4.41□□□□□ -1.7
CUL3-203ENST00000409096 TMEM102Q8N9M5 508 aaPredicted RBP4.41□□□□□ -1.7
CUL3-203ENST00000409096 SRA1Q9HD15 236 aaKnown RBP4.41□□□□□ -1.7
CUL3-203ENST00000409096 SH2B1Q9NRF2 756 aaPredicted RBP4.41□□□□□ -1.7
CUL3-203ENST00000409096 KBTBD4Q9NVX7 518 aa4.41□□□□□ -1.7
CUL3-203ENST00000409096 TRAK1Q9UPV9 953 aa4.41□□□□□ -1.7
CUL3-203ENST00000409096 TLR6Q9Y2C9 796 aa4.41□□□□□ -1.7
CUL3-203ENST00000409096 ENC1O14682 589 aa4.4□□□□□ -1.7
CUL3-203ENST00000409096 TERTO14746 1132 aaKnown RBP4.4□□□□□ -1.7
CUL3-203ENST00000409096 ITPKAP23677 461 aa4.4□□□□□ -1.7
CUL3-203ENST00000409096 ZC3H6P61129 1189 aaKnown RBP4.4□□□□□ -1.7
CUL3-203ENST00000409096 TXNDC11Q6PKC3 985 aa4.4□□□□□ -1.7
CUL3-203ENST00000409096 HS2ST1Q7LGA3 356 aa4.4□□□□□ -1.7
CUL3-203ENST00000409096 USP35Q9P2H5 1018 aa4.4□□□□□ -1.7
CUL3-203ENST00000409096 ALBP02768 609 aa4.4□□□□□ -1.71
CUL3-203ENST00000409096 NFX1Q12986 1120 aaKnown RBP4.4□□□□□ -1.71
CUL3-203ENST00000409096 RASIP1Q5U651 963 aa4.4□□□□□ -1.71
CUL3-203ENST00000409096 HGSNATQ68CP4 663 aa4.4□□□□□ -1.71
CUL3-203ENST00000409096 ERMP1Q7Z2K6 904 aa4.4□□□□□ -1.71
CUL3-203ENST00000409096 TINF2Q9BSI4 451 aa4.4□□□□□ -1.71
CUL3-203ENST00000409096 ZNF576Q9H609 170 aa4.4□□□□□ -1.71
CUL3-203ENST00000409096 DDX41Q9UJV9 622 aaKnown RBP4.4□□□□□ -1.71
CUL3-203ENST00000409096 STARD13Q9Y3M8 1113 aa4.4□□□□□ -1.71
CUL3-203ENST00000409096 EPHA1P21709 976 aa4.39□□□□□ -1.71
CUL3-203ENST00000409096 ST13P50502 369 aaKnown RBP4.39□□□□□ -1.71
CUL3-203ENST00000409096 ELMSAN1Q6PJG2 1045 aa4.39□□□□□ -1.71
CUL3-203ENST00000409096 VN1R5Q7Z5H4 357 aa4.39□□□□□ -1.71
CUL3-203ENST00000409096 ACDQ96AP0 544 aa4.39□□□□□ -1.71
CUL3-203ENST00000409096 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.39□□□□□ -1.71
CUL3-203ENST00000409096 ELOA3CA0A087WX78 387 aaPredicted RBP4.39□□□□□ -1.71
CUL3-203ENST00000409096 ELOA3DA6NLF2 546 aaPredicted RBP4.39□□□□□ -1.71
CUL3-203ENST00000409096 ADARB2-AS1A8MUL3 147 aa4.39□□□□□ -1.71
CUL3-203ENST00000409096 MINDY4BA8MYZ0 360 aa4.39□□□□□ -1.71
CUL3-203ENST00000409096 ADAMTS2O95450 1211 aa4.39□□□□□ -1.71
CUL3-203ENST00000409096 PTPN12Q05209 780 aaKnown RBP4.39□□□□□ -1.71
CUL3-203ENST00000409096 ELOA3BQ3SY89 546 aa4.39□□□□□ -1.71
CUL3-203ENST00000409096 ELOA3Q8NG57 546 aa4.39□□□□□ -1.71
CUL3-203ENST00000409096 CAPN10Q9HC96 672 aa4.39□□□□□ -1.71
CUL3-203ENST00000409096 SEC31BQ9NQW1 1179 aa4.39□□□□□ -1.71
CUL3-203ENST00000409096 LMTK3Q96Q04 1460 aa4.39□□□□□ -1.71
CUL3-203ENST00000409096 ZNF423Q2M1K9 1284 aa4.38□□□□□ -1.71
CUL3-203ENST00000409096 TGIF2Q9GZN2 237 aa4.38□□□□□ -1.71
CUL3-203ENST00000409096 CCSER2Q9H7U1 834 aa4.38□□□□□ -1.71
CUL3-203ENST00000409096 AVENQ9NQS1 362 aaPredicted RBP4.38□□□□□ -1.71
CUL3-203ENST00000409096 GPN3Q9UHW5 284 aaPredicted RBP4.38□□□□□ -1.71
CUL3-203ENST00000409096 SMNDC1O75940 238 aaKnown RBP eCLIP4.38□□□□□ -1.71
CUL3-203ENST00000409096 EPXP11678 715 aa4.38□□□□□ -1.71
CUL3-203ENST00000409096 FAM160A1Q05DH4 1040 aa4.38□□□□□ -1.71
CUL3-203ENST00000409096 GRIK5Q16478 980 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms