RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 IDEP14735 1019 aa16.27■□□□□ 0.2
ITGA6-202ENST00000409080 FAM114A1Q8IWE2 563 aa16.27■□□□□ 0.2
ITGA6-202ENST00000409080 LPIN2Q92539 896 aa16.27■□□□□ 0.2
ITGA6-202ENST00000409080 TAF4BQ92750 862 aa16.27■□□□□ 0.2
ITGA6-202ENST00000409080 BRF1Q92994 677 aa16.27■□□□□ 0.2
ITGA6-202ENST00000409080 SBNO2Q9Y2G9 1366 aa16.27■□□□□ 0.2
ITGA6-202ENST00000409080 BICD1Q96G01 975 aa16.27■□□□□ 0.2
ITGA6-202ENST00000409080 ZNF496Q96IT1 587 aaPredicted RBP16.27■□□□□ 0.2
ITGA6-202ENST00000409080 ZNF408Q9H9D4 720 aa16.27■□□□□ 0.2
ITGA6-202ENST00000409080 KIAA0232Q92628 1395 aa16.27■□□□□ 0.19
ITGA6-202ENST00000409080 CEP85Q6P2H3 762 aa16.27■□□□□ 0.19
ITGA6-202ENST00000409080 EPB41L2O43491 1005 aaKnown RBP16.26■□□□□ 0.19
ITGA6-202ENST00000409080 GNA11P29992 359 aa16.26■□□□□ 0.19
ITGA6-202ENST00000409080 SSR1P43307 286 aaKnown RBP16.26■□□□□ 0.19
ITGA6-202ENST00000409080 TSHZ3Q63HK5 1081 aa16.26■□□□□ 0.19
ITGA6-202ENST00000409080 UNC5CLQ8IV45 518 aa16.26■□□□□ 0.19
ITGA6-202ENST00000409080 HELLSQ9NRZ9 838 aa16.26■□□□□ 0.19
ITGA6-202ENST00000409080 FAM135BQ49AJ0 1406 aa16.26■□□□□ 0.19
ITGA6-202ENST00000409080 METP08581 1390 aa16.26■□□□□ 0.19
ITGA6-202ENST00000409080 ZNF335Q9H4Z2 1342 aaPredicted RBP16.26■□□□□ 0.19
ITGA6-202ENST00000409080 CCDC174Q6PII3 467 aa16.26■□□□□ 0.19
ITGA6-202ENST00000409080 IVNS1ABPQ9Y6Y0 642 aa16.26■□□□□ 0.19
ITGA6-202ENST00000409080 SDSP20132 328 aa16.26■□□□□ 0.19
ITGA6-202ENST00000409080 GJB2P29033 226 aa16.26■□□□□ 0.19
ITGA6-202ENST00000409080 CFAP100Q494V2 611 aa16.26■□□□□ 0.19
ITGA6-202ENST00000409080 DLGAP5Q15398 846 aa16.25■□□□□ 0.19
ITGA6-202ENST00000409080 C2CD5Q86YS7 1000 aa16.25■□□□□ 0.19
ITGA6-202ENST00000409080 RBM28Q9NW13 759 aaKnown RBP16.25■□□□□ 0.19
ITGA6-202ENST00000409080 A0A1B0GUL7 405 aa16.25■□□□□ 0.19
ITGA6-202ENST00000409080 KRT24Q2M2I5 525 aa16.25■□□□□ 0.19
ITGA6-202ENST00000409080 DCTPP1Q9H773 170 aa16.25■□□□□ 0.19
ITGA6-202ENST00000409080 NMIQ13287 307 aaPredicted RBP16.25■□□□□ 0.19
ITGA6-202ENST00000409080 RMND1Q9NWS8 449 aa16.25■□□□□ 0.19
ITGA6-202ENST00000409080 PRC1O43663 620 aa16.25■□□□□ 0.19
ITGA6-202ENST00000409080 SPA17Q15506 151 aa16.25■□□□□ 0.19
ITGA6-202ENST00000409080 KIAA1328Q86T90 577 aa16.24■□□□□ 0.19
ITGA6-202ENST00000409080 ESYT1Q9BSJ8 1104 aa16.24■□□□□ 0.19
ITGA6-202ENST00000409080 ALG1Q9BT22 464 aa16.24■□□□□ 0.19
ITGA6-202ENST00000409080 WDR17Q8IZU2 1322 aa16.24■□□□□ 0.19
ITGA6-202ENST00000409080 RPS8P62241 208 aaKnown RBP16.24■□□□□ 0.19
ITGA6-202ENST00000409080 SETQ01105 290 aaPredicted RBP16.24■□□□□ 0.19
ITGA6-202ENST00000409080 KLHL10Q6JEL2 608 aa16.24■□□□□ 0.19
ITGA6-202ENST00000409080 FERMT2Q96AC1 680 aa16.24■□□□□ 0.19
ITGA6-202ENST00000409080 DDX19AQ9NUU7 478 aaKnown RBP16.24■□□□□ 0.19
ITGA6-202ENST00000409080 ANKARQ7Z5J8 1434 aa16.24■□□□□ 0.19
ITGA6-202ENST00000409080 CCDC171Q6TFL3 1326 aa16.24■□□□□ 0.19
ITGA6-202ENST00000409080 PARP1P09874 1014 aaKnown RBP16.24■□□□□ 0.19
ITGA6-202ENST00000409080 CCDC40Q4G0X9 1142 aa16.24■□□□□ 0.19
ITGA6-202ENST00000409080 APBB1IPQ7Z5R6 666 aaPredicted RBP16.24■□□□□ 0.19
ITGA6-202ENST00000409080 LOC102724428A0A0B4J2F2 783 aa16.23■□□□□ 0.19
ITGA6-202ENST00000409080 SIK1P57059 783 aa16.23■□□□□ 0.19
ITGA6-202ENST00000409080 EIF4A1P60842 406 aaKnown RBP16.23■□□□□ 0.19
ITGA6-202ENST00000409080 GCC2Q8IWJ2 1684 aa16.23■□□□□ 0.19
ITGA6-202ENST00000409080 ATP7BP35670 1465 aa16.23■□□□□ 0.19
ITGA6-202ENST00000409080 MYOM2P54296 1465 aa16.23■□□□□ 0.19
ITGA6-202ENST00000409080 KDM5AP29375 1690 aaKnown RBP16.23■□□□□ 0.19
ITGA6-202ENST00000409080 ATP2B4P23634 1241 aa16.23■□□□□ 0.19
ITGA6-202ENST00000409080 TNPO1Q92973 898 aaKnown RBP16.23■□□□□ 0.19
ITGA6-202ENST00000409080 GLT8D2Q9H1C3 349 aa16.23■□□□□ 0.19
ITGA6-202ENST00000409080 ARAP3Q8WWN8 1544 aa16.23■□□□□ 0.19
ITGA6-202ENST00000409080 MBD4O95243 580 aa16.23■□□□□ 0.19
ITGA6-202ENST00000409080 USP48Q86UV5 1035 aa16.23■□□□□ 0.19
ITGA6-202ENST00000409080 FSIP1Q8NA03 581 aa16.23■□□□□ 0.19
ITGA6-202ENST00000409080 STX6O43752 255 aa16.23■□□□□ 0.19
ITGA6-202ENST00000409080 RAB3GAP1Q15042 981 aa16.23■□□□□ 0.19
ITGA6-202ENST00000409080 TRMT1LQ7Z2T5 733 aaKnown RBP16.23■□□□□ 0.19
ITGA6-202ENST00000409080 TMC4Q7Z404 712 aa16.23■□□□□ 0.19
ITGA6-202ENST00000409080 KIF24Q5T7B8 1368 aa16.23■□□□□ 0.19
ITGA6-202ENST00000409080 SHROOM2Q13796 1616 aa16.22■□□□□ 0.19
ITGA6-202ENST00000409080 GCKRQ14397 625 aa16.22■□□□□ 0.19
ITGA6-202ENST00000409080 SPC24Q8NBT2 197 aa16.22■□□□□ 0.19
ITGA6-202ENST00000409080 JAG2Q9Y219 1238 aa16.22■□□□□ 0.19
ITGA6-202ENST00000409080 ARHGAP27Q6ZUM4 889 aa16.22■□□□□ 0.19
ITGA6-202ENST00000409080 ARHGEF25Q86VW2 580 aa16.22■□□□□ 0.19
ITGA6-202ENST00000409080 FAM43AQ8N2R8 423 aa16.22■□□□□ 0.19
ITGA6-202ENST00000409080 PER1O15534 1290 aaPredicted RBP16.22■□□□□ 0.19
ITGA6-202ENST00000409080 TRIM37O94972 964 aa16.22■□□□□ 0.19
ITGA6-202ENST00000409080 TNNI3KQ59H18 835 aa16.22■□□□□ 0.19
ITGA6-202ENST00000409080 FPGT-TNNI3KV9GXZ4 949 aa16.22■□□□□ 0.19
ITGA6-202ENST00000409080 CCDC183Q5T5S1 534 aa16.21■□□□□ 0.19
ITGA6-202ENST00000409080 CCDC102BQ68D86 513 aa16.21■□□□□ 0.19
ITGA6-202ENST00000409080 MSL1Q68DK7 614 aa16.21■□□□□ 0.19
ITGA6-202ENST00000409080 XAGE2Q96GT9 111 aa16.21■□□□□ 0.19
ITGA6-202ENST00000409080 GTPBP4Q9BZE4 634 aaKnown RBP16.21■□□□□ 0.19
ITGA6-202ENST00000409080 EXOC1Q9NV70 894 aa16.21■□□□□ 0.19
ITGA6-202ENST00000409080 KIF4AO95239 1232 aa16.21■□□□□ 0.19
ITGA6-202ENST00000409080 MTIF2P46199 727 aaKnown RBP16.21■□□□□ 0.19
ITGA6-202ENST00000409080 EAPPQ56P03 285 aaPredicted RBP16.21■□□□□ 0.19
ITGA6-202ENST00000409080 AATKQ6ZMQ8 1374 aa16.21■□□□□ 0.18
ITGA6-202ENST00000409080 TCERG1LQ5VWI1 586 aa16.21■□□□□ 0.18
ITGA6-202ENST00000409080 RAB11FIP4Q86YS3 637 aa16.21■□□□□ 0.18
ITGA6-202ENST00000409080 CSADQ9Y600 493 aa16.2■□□□□ 0.18
ITGA6-202ENST00000409080 CCDC172P0C7W6 258 aa16.2■□□□□ 0.18
ITGA6-202ENST00000409080 ARHGAP29Q52LW3 1261 aa16.2■□□□□ 0.18
ITGA6-202ENST00000409080 Q6ZUG5 572 aa16.2■□□□□ 0.18
ITGA6-202ENST00000409080 AS3MTQ9HBK9 375 aa16.2■□□□□ 0.18
ITGA6-202ENST00000409080 FBXO3Q9UK99 471 aa16.2■□□□□ 0.18
ITGA6-202ENST00000409080 ANKRD62A6NC57 917 aa16.19■□□□□ 0.18
ITGA6-202ENST00000409080 MAP3K9P80192 1104 aa16.19■□□□□ 0.18
ITGA6-202ENST00000409080 ZRSR2Q15696 482 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms