RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 HSPA1BP0DMV9 641 aaKnown RBP11.85□□□□□ -0.51
POLR1A-202ENST00000409024 SLC5A1P13866 664 aa11.85□□□□□ -0.51
POLR1A-202ENST00000409024 GORABQ5T7V8 394 aa11.85□□□□□ -0.51
POLR1A-202ENST00000409024 BICDL1Q6ZP65 573 aa11.85□□□□□ -0.51
POLR1A-202ENST00000409024 KIAA1211Q6ZU35 1233 aa11.85□□□□□ -0.51
POLR1A-202ENST00000409024 AMIGO3Q86WK7 504 aa11.85□□□□□ -0.51
POLR1A-202ENST00000409024 CNBD1Q8NA66 436 aa11.85□□□□□ -0.51
POLR1A-202ENST00000409024 SNX21Q969T3 373 aa11.85□□□□□ -0.51
POLR1A-202ENST00000409024 CCDC85AQ96PX6 553 aaPredicted RBP11.85□□□□□ -0.51
POLR1A-202ENST00000409024 AK9Q5TCS8 1911 aa11.84□□□□□ -0.51
POLR1A-202ENST00000409024 RPS8P62241 208 aaKnown RBP11.84□□□□□ -0.51
POLR1A-202ENST00000409024 ST5P78524 1137 aa11.84□□□□□ -0.51
POLR1A-202ENST00000409024 UBE4AQ14139 1066 aa11.84□□□□□ -0.51
POLR1A-202ENST00000409024 RABEP1Q15276 862 aa11.84□□□□□ -0.51
POLR1A-202ENST00000409024 TTC39AQ5SRH9 613 aa11.84□□□□□ -0.51
POLR1A-202ENST00000409024 DDX46Q7L014 1031 aaKnown RBP11.84□□□□□ -0.51
POLR1A-202ENST00000409024 KBTBD3Q8NAB2 608 aa11.84□□□□□ -0.51
POLR1A-202ENST00000409024 ANKRD2Q9GZV1 360 aa11.84□□□□□ -0.51
POLR1A-202ENST00000409024 NPHP1O15259 732 aa11.83□□□□□ -0.52
POLR1A-202ENST00000409024 IGSF3O75054 1194 aa11.83□□□□□ -0.52
POLR1A-202ENST00000409024 SERPINB2P05120 415 aa11.83□□□□□ -0.52
POLR1A-202ENST00000409024 ZFYP08048 801 aaPredicted RBP11.83□□□□□ -0.52
POLR1A-202ENST00000409024 TTF1Q15361 905 aaPredicted RBP11.83□□□□□ -0.52
POLR1A-202ENST00000409024 ARHGAP27Q6ZUM4 889 aa11.83□□□□□ -0.52
POLR1A-202ENST00000409024 FSD1Q9BTV5 496 aa11.83□□□□□ -0.52
POLR1A-202ENST00000409024 SEC31BQ9NQW1 1179 aa11.83□□□□□ -0.52
POLR1A-202ENST00000409024 PAG1Q9NWQ8 432 aa11.83□□□□□ -0.52
POLR1A-202ENST00000409024 KLRG2A4D1S0 409 aaPredicted RBP11.82□□□□□ -0.52
POLR1A-202ENST00000409024 MAP4K4O95819 1239 aaPredicted RBP11.82□□□□□ -0.52
POLR1A-202ENST00000409024 ARID4AP29374 1257 aaPredicted RBP11.82□□□□□ -0.52
POLR1A-202ENST00000409024 CRY2Q49AN0 593 aa11.82□□□□□ -0.52
POLR1A-202ENST00000409024 ZSCAN25Q6NSZ9 544 aa11.82□□□□□ -0.52
POLR1A-202ENST00000409024 TMC4Q7Z404 712 aa11.82□□□□□ -0.52
POLR1A-202ENST00000409024 HELLSQ9NRZ9 838 aa11.82□□□□□ -0.52
POLR1A-202ENST00000409024 ARAP2Q8WZ64 1704 aa11.81□□□□□ -0.52
POLR1A-202ENST00000409024 CHRNDQ07001 517 aa11.81□□□□□ -0.52
POLR1A-202ENST00000409024 PRR5LQ6MZQ0 368 aa11.81□□□□□ -0.52
POLR1A-202ENST00000409024 TMED8Q6PL24 325 aaPredicted RBP11.81□□□□□ -0.52
POLR1A-202ENST00000409024 SMIM5Q71RC9 77 aa11.81□□□□□ -0.52
POLR1A-202ENST00000409024 KIF2CQ99661 725 aa11.81□□□□□ -0.52
POLR1A-202ENST00000409024 ANO2Q9NQ90 1003 aa11.81□□□□□ -0.52
POLR1A-202ENST00000409024 MINPP1Q9UNW1 487 aa11.81□□□□□ -0.52
POLR1A-202ENST00000409024 BCS1LQ9Y276 419 aa11.81□□□□□ -0.52
POLR1A-202ENST00000409024 POLRMTO00411 1230 aaKnown RBP11.8□□□□□ -0.52
POLR1A-202ENST00000409024 BBOX1O75936 387 aa11.8□□□□□ -0.52
POLR1A-202ENST00000409024 HOXA10P31260 410 aaPredicted RBP11.8□□□□□ -0.52
POLR1A-202ENST00000409024 HSPA4P34932 840 aa11.8□□□□□ -0.52
POLR1A-202ENST00000409024 GRAPQ13588 217 aa11.8□□□□□ -0.52
POLR1A-202ENST00000409024 CCDC102BQ68D86 513 aa11.8□□□□□ -0.52
POLR1A-202ENST00000409024 CWC27Q6UX04 472 aaKnown RBP11.8□□□□□ -0.52
POLR1A-202ENST00000409024 SMC1BQ8NDV3 1235 aa11.8□□□□□ -0.52
POLR1A-202ENST00000409024 GRAPLQ8TC17 118 aaPredicted RBP11.8□□□□□ -0.52
POLR1A-202ENST00000409024 RBM17Q96I25 401 aaKnown RBP11.8□□□□□ -0.52
POLR1A-202ENST00000409024 CRAMP1Q96RY5 1269 aa11.8□□□□□ -0.52
POLR1A-202ENST00000409024 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.8□□□□□ -0.52
POLR1A-202ENST00000409024 LSG1Q9H089 658 aaKnown RBP11.8□□□□□ -0.52
POLR1A-202ENST00000409024 GNL3LQ9NVN8 582 aaKnown RBP11.8□□□□□ -0.52
POLR1A-202ENST00000409024 SEMA3EO15041 775 aa11.79□□□□□ -0.52
POLR1A-202ENST00000409024 ADORA1P30542 326 aa11.79□□□□□ -0.52
POLR1A-202ENST00000409024 MCM2P49736 904 aa11.79□□□□□ -0.52
POLR1A-202ENST00000409024 TGFB2P61812 414 aa11.79□□□□□ -0.52
POLR1A-202ENST00000409024 MCMDC2Q4G0Z9 681 aa11.79□□□□□ -0.52
POLR1A-202ENST00000409024 C9orf131Q5VYM1 1079 aa11.79□□□□□ -0.52
POLR1A-202ENST00000409024 C3orf67Q6ZVT6 689 aa11.79□□□□□ -0.52
POLR1A-202ENST00000409024 HSCBQ8IWL3 235 aa11.79□□□□□ -0.52
POLR1A-202ENST00000409024 KCNB2Q92953 911 aa11.79□□□□□ -0.52
POLR1A-202ENST00000409024 DNAJC2Q99543 621 aaKnown RBP11.79□□□□□ -0.52
POLR1A-202ENST00000409024 BRIP1Q9BX63 1249 aa11.79□□□□□ -0.52
POLR1A-202ENST00000409024 RRAGCQ9HB90 399 aa11.79□□□□□ -0.52
POLR1A-202ENST00000409024 LEMD3Q9Y2U8 911 aa11.79□□□□□ -0.52
POLR1A-202ENST00000409024 PDS5AQ29RF7 1337 aaKnown RBP11.79□□□□□ -0.52
POLR1A-202ENST00000409024 MED23Q9ULK4 1368 aa11.79□□□□□ -0.52
POLR1A-202ENST00000409024 NRXN2Q9P2S2 1712 aa11.78□□□□□ -0.52
POLR1A-202ENST00000409024 GOLIM4O00461 696 aa11.78□□□□□ -0.52
POLR1A-202ENST00000409024 RNF113AO15541 343 aaKnown RBP11.78□□□□□ -0.52
POLR1A-202ENST00000409024 ST18O60284 1047 aa11.78□□□□□ -0.52
POLR1A-202ENST00000409024 NMIQ13287 307 aaPredicted RBP11.78□□□□□ -0.52
POLR1A-202ENST00000409024 CAVIN4Q5BKX8 364 aa11.78□□□□□ -0.52
POLR1A-202ENST00000409024 ZMYM1Q5SVZ6 1142 aa11.78□□□□□ -0.52
POLR1A-202ENST00000409024 C15orf52Q6ZUT6 534 aaKnown RBP11.78□□□□□ -0.52
POLR1A-202ENST00000409024 RPGRQ92834 1020 aaKnown RBP11.78□□□□□ -0.52
POLR1A-202ENST00000409024 CELF1Q92879 486 aaKnown RBP11.78□□□□□ -0.52
POLR1A-202ENST00000409024 MAP4K1Q92918 833 aa11.78□□□□□ -0.52
POLR1A-202ENST00000409024 PARP3Q9Y6F1 533 aa11.78□□□□□ -0.52
POLR1A-202ENST00000409024 ZNF804BA4D1E1 1349 aa11.78□□□□□ -0.52
POLR1A-202ENST00000409024 PDE6BP35913 854 aa11.77□□□□□ -0.53
POLR1A-202ENST00000409024 FKBP4Q02790 459 aaKnown RBP eCLIP11.77□□□□□ -0.53
POLR1A-202ENST00000409024 DDR1Q08345 913 aa11.77□□□□□ -0.53
POLR1A-202ENST00000409024 TSGA10IPQ3SY00 556 aa11.77□□□□□ -0.53
POLR1A-202ENST00000409024 RNF20Q5VTR2 975 aa11.77□□□□□ -0.53
POLR1A-202ENST00000409024 TBC1D2Q9BYX2 928 aa11.77□□□□□ -0.53
POLR1A-202ENST00000409024 HMG20BQ9P0W2 317 aa11.77□□□□□ -0.53
POLR1A-202ENST00000409024 CCDC171Q6TFL3 1326 aa11.77□□□□□ -0.53
POLR1A-202ENST00000409024 A0A0G2JLW4 131 aa11.76□□□□□ -0.53
POLR1A-202ENST00000409024 TAF5LO75529 589 aa11.76□□□□□ -0.53
POLR1A-202ENST00000409024 ZKSCAN1P17029 563 aaPredicted RBP11.76□□□□□ -0.53
POLR1A-202ENST00000409024 MCAMP43121 646 aa11.76□□□□□ -0.53
POLR1A-202ENST00000409024 ZAP70P43403 619 aa11.76□□□□□ -0.53
POLR1A-202ENST00000409024 PHKA1P46020 1223 aa11.76□□□□□ -0.53
POLR1A-202ENST00000409024 UBE3CQ15386 1083 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms