RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 SLC4A10Q6U841 1118 aa12.24□□□□□ -0.45
NIF3L1-202ENST00000409020 TXNRD3Q86VQ6 643 aa12.24□□□□□ -0.45
NIF3L1-202ENST00000409020 DSG3P32926 999 aa12.23□□□□□ -0.45
NIF3L1-202ENST00000409020 VEGFBP49765 207 aa12.23□□□□□ -0.45
NIF3L1-202ENST00000409020 SSH1Q8WYL5 1049 aa12.23□□□□□ -0.45
NIF3L1-202ENST00000409020 MXD3Q9BW11 206 aa12.23□□□□□ -0.45
NIF3L1-202ENST00000409020 ASTN2O75129 1339 aaPredicted RBP12.23□□□□□ -0.45
NIF3L1-202ENST00000409020 CACNA1FO60840 1977 aa12.23□□□□□ -0.45
NIF3L1-202ENST00000409020 E9PSI1 815 aa12.22□□□□□ -0.45
NIF3L1-202ENST00000409020 CCT4P50991 539 aaKnown RBP12.22□□□□□ -0.45
NIF3L1-202ENST00000409020 KAZALD1Q96I82 304 aa12.22□□□□□ -0.45
NIF3L1-202ENST00000409020 ZNF594Q96JF6 807 aaPredicted RBP12.22□□□□□ -0.45
NIF3L1-202ENST00000409020 GRM8O00222 908 aa12.22□□□□□ -0.45
NIF3L1-202ENST00000409020 VIL1P09327 827 aaKnown RBP12.22□□□□□ -0.45
NIF3L1-202ENST00000409020 HSPA1AP0DMV8 641 aaKnown RBP12.22□□□□□ -0.45
NIF3L1-202ENST00000409020 HSPA1BP0DMV9 641 aaKnown RBP12.22□□□□□ -0.45
NIF3L1-202ENST00000409020 ATP2B4P23634 1241 aa12.22□□□□□ -0.45
NIF3L1-202ENST00000409020 RBM26Q5T8P6 1007 aaKnown RBP12.22□□□□□ -0.45
NIF3L1-202ENST00000409020 PGAP2Q9UHJ9 254 aa12.22□□□□□ -0.45
NIF3L1-202ENST00000409020 MED23Q9ULK4 1368 aa12.21□□□□□ -0.45
NIF3L1-202ENST00000409020 A0A0U1RQG5 324 aaPredicted RBP12.21□□□□□ -0.45
NIF3L1-202ENST00000409020 H7C1D1 291 aa12.21□□□□□ -0.45
NIF3L1-202ENST00000409020 CCER2I3L3R5 266 aa12.21□□□□□ -0.45
NIF3L1-202ENST00000409020 TAF5LO75529 589 aa12.21□□□□□ -0.45
NIF3L1-202ENST00000409020 NBPF7P0C2Y1 421 aaPredicted RBP12.21□□□□□ -0.45
NIF3L1-202ENST00000409020 IGHMBP2P38935 993 aaKnown RBP12.21□□□□□ -0.45
NIF3L1-202ENST00000409020 COL13A1Q5TAT6 717 aaPredicted RBP12.21□□□□□ -0.45
NIF3L1-202ENST00000409020 LMBR1LQ6UX01 489 aa12.21□□□□□ -0.45
NIF3L1-202ENST00000409020 IFNLR1Q8IU57 520 aaPredicted RBP12.21□□□□□ -0.45
NIF3L1-202ENST00000409020 HELBQ8NG08 1087 aaPredicted RBP12.21□□□□□ -0.45
NIF3L1-202ENST00000409020 DPF2Q92785 391 aa12.21□□□□□ -0.45
NIF3L1-202ENST00000409020 SUCLG2Q96I99 432 aa12.21□□□□□ -0.45
NIF3L1-202ENST00000409020 ABT1Q9ULW3 272 aaKnown RBP12.21□□□□□ -0.45
NIF3L1-202ENST00000409020 CHMP3Q9Y3E7 222 aa12.21□□□□□ -0.45
NIF3L1-202ENST00000409020 RASSF10A6NK89 507 aa12.2□□□□□ -0.46
NIF3L1-202ENST00000409020 BRD2P25440 801 aaKnown RBP12.2□□□□□ -0.46
NIF3L1-202ENST00000409020 CHRNDQ07001 517 aa12.2□□□□□ -0.46
NIF3L1-202ENST00000409020 RSBN1LQ6PCB5 846 aaPredicted RBP12.2□□□□□ -0.46
NIF3L1-202ENST00000409020 TRMT2AQ8IZ69 625 aaKnown RBP12.2□□□□□ -0.46
NIF3L1-202ENST00000409020 IL27Q8NEV9 243 aa12.2□□□□□ -0.46
NIF3L1-202ENST00000409020 SRCIN1Q9C0H9 1055 aa12.2□□□□□ -0.46
NIF3L1-202ENST00000409020 ZNF804BA4D1E1 1349 aa12.2□□□□□ -0.46
NIF3L1-202ENST00000409020 ANKRD18BA2A2Z9 1011 aa12.19□□□□□ -0.46
NIF3L1-202ENST00000409020 ADM5C9JUS6 153 aa12.19□□□□□ -0.46
NIF3L1-202ENST00000409020 G3V3G9 751 aa12.19□□□□□ -0.46
NIF3L1-202ENST00000409020 DCAF8Q5TAQ9 597 aa12.19□□□□□ -0.46
NIF3L1-202ENST00000409020 USP48Q86UV5 1035 aa12.19□□□□□ -0.46
NIF3L1-202ENST00000409020 GMLQ99445 158 aa12.19□□□□□ -0.46
NIF3L1-202ENST00000409020 MPHOSPH8Q99549 860 aa12.19□□□□□ -0.46
NIF3L1-202ENST00000409020 ZNF408Q9H9D4 720 aa12.19□□□□□ -0.46
NIF3L1-202ENST00000409020 C9orf78Q9NZ63 289 aaPredicted RBP12.19□□□□□ -0.46
NIF3L1-202ENST00000409020 SCAF8Q9UPN6 1271 aaKnown RBP12.19□□□□□ -0.46
NIF3L1-202ENST00000409020 ZNF646O15015 1829 aaPredicted RBP12.19□□□□□ -0.46
NIF3L1-202ENST00000409020 IRS2Q9Y4H2 1338 aa12.19□□□□□ -0.46
NIF3L1-202ENST00000409020 CELF2O95319 508 aaKnown RBP12.19□□□□□ -0.46
NIF3L1-202ENST00000409020 RPS12P25398 132 aaKnown RBP12.19□□□□□ -0.46
NIF3L1-202ENST00000409020 IFIT5Q13325 482 aaKnown RBP12.19□□□□□ -0.46
NIF3L1-202ENST00000409020 USP17L3A6NCW0 530 aa12.18□□□□□ -0.46
NIF3L1-202ENST00000409020 USP17L4A6NCW7 530 aa12.18□□□□□ -0.46
NIF3L1-202ENST00000409020 ALDH1L1O75891 902 aa12.18□□□□□ -0.46
NIF3L1-202ENST00000409020 GRM1Q13255 1194 aa12.18□□□□□ -0.46
NIF3L1-202ENST00000409020 KIF4BQ2VIQ3 1234 aa12.18□□□□□ -0.46
NIF3L1-202ENST00000409020 DEFB115Q30KQ5 88 aa12.18□□□□□ -0.46
NIF3L1-202ENST00000409020 DACT2Q5SW24 774 aa12.18□□□□□ -0.46
NIF3L1-202ENST00000409020 CYP4F22Q6NT55 531 aa12.18□□□□□ -0.46
NIF3L1-202ENST00000409020 USP17L1Q7RTZ2 530 aa12.18□□□□□ -0.46
NIF3L1-202ENST00000409020 PODNQ7Z5L7 613 aa12.18□□□□□ -0.46
NIF3L1-202ENST00000409020 ZC3H15Q8WU90 426 aaKnown RBP12.18□□□□□ -0.46
NIF3L1-202ENST00000409020 FBXW7Q969H0 707 aa12.18□□□□□ -0.46
NIF3L1-202ENST00000409020 A0A1B0GUL6 1792 aa12.18□□□□□ -0.46
NIF3L1-202ENST00000409020 PSME4Q14997 1843 aa12.17□□□□□ -0.46
NIF3L1-202ENST00000409020 ZNF280AP59817 542 aaPredicted RBP12.17□□□□□ -0.46
NIF3L1-202ENST00000409020 MIER1Q8N108 512 aa12.17□□□□□ -0.46
NIF3L1-202ENST00000409020 PUS3Q9BZE2 481 aaKnown RBP12.17□□□□□ -0.46
NIF3L1-202ENST00000409020 BICC1Q9H694 974 aaKnown RBP12.17□□□□□ -0.46
NIF3L1-202ENST00000409020 LEMD3Q9Y2U8 911 aa12.17□□□□□ -0.46
NIF3L1-202ENST00000409020 UTYO14607 1347 aa12.17□□□□□ -0.46
NIF3L1-202ENST00000409020 WDR33Q9C0J8 1336 aaKnown RBP12.17□□□□□ -0.46
NIF3L1-202ENST00000409020 ZNF609O15014 1411 aa12.16□□□□□ -0.46
NIF3L1-202ENST00000409020 FOXN1O15353 648 aa12.16□□□□□ -0.46
NIF3L1-202ENST00000409020 PAXIP1Q6ZW49 1069 aaPredicted RBP12.16□□□□□ -0.46
NIF3L1-202ENST00000409020 CDC37L1Q7L3B6 337 aa12.16□□□□□ -0.46
NIF3L1-202ENST00000409020 SAPCD2Q86UD0 394 aa12.16□□□□□ -0.46
NIF3L1-202ENST00000409020 ANKRD44Q8N8A2 993 aa12.16□□□□□ -0.46
NIF3L1-202ENST00000409020 ANKRD2Q9GZV1 360 aa12.16□□□□□ -0.46
NIF3L1-202ENST00000409020 SMC4Q9NTJ3 1288 aa12.16□□□□□ -0.46
NIF3L1-202ENST00000409020 GGA3Q9NZ52 723 aa12.16□□□□□ -0.46
NIF3L1-202ENST00000409020 JAG2Q9Y219 1238 aa12.16□□□□□ -0.46
NIF3L1-202ENST00000409020 TLL2Q9Y6L7 1015 aa12.16□□□□□ -0.46
NIF3L1-202ENST00000409020 PTPRCP08575 1304 aa12.16□□□□□ -0.46
NIF3L1-202ENST00000409020 PLIN1O60240 522 aa12.16□□□□□ -0.46
NIF3L1-202ENST00000409020 AOC2O75106 756 aa12.16□□□□□ -0.46
NIF3L1-202ENST00000409020 USP17L8P0C7I0 530 aa12.16□□□□□ -0.46
NIF3L1-202ENST00000409020 KCNJ4P48050 445 aa12.16□□□□□ -0.46
NIF3L1-202ENST00000409020 SCARF1Q14162 830 aa12.16□□□□□ -0.46
NIF3L1-202ENST00000409020 CCDC57Q2TAC2 916 aa12.16□□□□□ -0.46
NIF3L1-202ENST00000409020 IFFO2Q5TF58 517 aa12.16□□□□□ -0.46
NIF3L1-202ENST00000409020 KRT26Q7Z3Y9 468 aa12.16□□□□□ -0.46
NIF3L1-202ENST00000409020 AGBL3Q8NEM8 1001 aa12.16□□□□□ -0.46
NIF3L1-202ENST00000409020 COA1Q9GZY4 146 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms