RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 PAPPAQ13219 1627 aa19.53■□□□□ 0.72
COL23A1-202ENST00000407622 ERVV-2B6SEH9 535 aa19.53■□□□□ 0.72
COL23A1-202ENST00000407622 E7EWF7 191 aa19.53■□□□□ 0.72
COL23A1-202ENST00000407622 EXOSC10Q01780 885 aaKnown RBP19.53■□□□□ 0.72
COL23A1-202ENST00000407622 ANO6Q4KMQ2 910 aa19.53■□□□□ 0.72
COL23A1-202ENST00000407622 SASS6Q6UVJ0 657 aa19.53■□□□□ 0.72
COL23A1-202ENST00000407622 CCDC85AQ96PX6 553 aaPredicted RBP19.53■□□□□ 0.72
COL23A1-202ENST00000407622 CLSTN2Q9H4D0 955 aa19.53■□□□□ 0.72
COL23A1-202ENST00000407622 IL2RBP14784 551 aa19.53■□□□□ 0.72
COL23A1-202ENST00000407622 BICD2Q8TD16 824 aa19.53■□□□□ 0.72
COL23A1-202ENST00000407622 ADORA1P30542 326 aa19.52■□□□□ 0.72
COL23A1-202ENST00000407622 ADD1P35611 737 aaKnown RBP19.52■□□□□ 0.72
COL23A1-202ENST00000407622 RBM43Q6ZSC3 357 aaKnown RBP19.52■□□□□ 0.72
COL23A1-202ENST00000407622 CBX8Q9HC52 389 aa19.52■□□□□ 0.72
COL23A1-202ENST00000407622 ZNF330Q9Y3S2 320 aaPredicted RBP19.52■□□□□ 0.72
COL23A1-202ENST00000407622 COL14A1Q05707 1796 aaKnown RBP19.52■□□□□ 0.72
COL23A1-202ENST00000407622 PTPDC1A2A3K4 754 aa19.52■□□□□ 0.71
COL23A1-202ENST00000407622 OSBP2Q969R2 916 aa19.52■□□□□ 0.71
COL23A1-202ENST00000407622 DDX19AQ9NUU7 478 aaKnown RBP19.52■□□□□ 0.71
COL23A1-202ENST00000407622 SHANK3Q9BYB0 1731 aa19.52■□□□□ 0.71
COL23A1-202ENST00000407622 MYH15Q9Y2K3 1946 aa19.51■□□□□ 0.71
COL23A1-202ENST00000407622 RNF113AO15541 343 aaKnown RBP19.51■□□□□ 0.71
COL23A1-202ENST00000407622 DNTTIP2Q5QJE6 756 aaKnown RBP19.51■□□□□ 0.71
COL23A1-202ENST00000407622 FAM13BQ9NYF5 915 aa19.51■□□□□ 0.71
COL23A1-202ENST00000407622 PYCARDQ9ULZ3 195 aa19.51■□□□□ 0.71
COL23A1-202ENST00000407622 ADAMTS2O95450 1211 aa19.51■□□□□ 0.71
COL23A1-202ENST00000407622 AGXT2Q9BYV1 514 aa19.51■□□□□ 0.71
COL23A1-202ENST00000407622 GPHNQ9NQX3 736 aaPredicted RBP19.51■□□□□ 0.71
COL23A1-202ENST00000407622 NAP1L2Q9ULW6 460 aaPredicted RBP19.51■□□□□ 0.71
COL23A1-202ENST00000407622 HMGB1P09429 215 aaKnown RBP19.5■□□□□ 0.71
COL23A1-202ENST00000407622 FKBP4Q02790 459 aaKnown RBP eCLIP19.5■□□□□ 0.71
COL23A1-202ENST00000407622 FOXP2O15409 715 aa19.5■□□□□ 0.71
COL23A1-202ENST00000407622 CIAO1O76071 339 aa19.5■□□□□ 0.71
COL23A1-202ENST00000407622 NKX1-1Q15270 411 aaPredicted RBP19.5■□□□□ 0.71
COL23A1-202ENST00000407622 LLPHQ9BRT6 129 aaKnown RBP19.5■□□□□ 0.71
COL23A1-202ENST00000407622 TNS2Q63HR2 1409 aa19.49■□□□□ 0.71
COL23A1-202ENST00000407622 GUCY1B3Q02153 619 aa19.49■□□□□ 0.71
COL23A1-202ENST00000407622 SCARF1Q14162 830 aa19.49■□□□□ 0.71
COL23A1-202ENST00000407622 HSP90AB3PQ58FF7 597 aa19.49■□□□□ 0.71
COL23A1-202ENST00000407622 ISCA1Q9BUE6 129 aa19.49■□□□□ 0.71
COL23A1-202ENST00000407622 ZSCAN16Q9H4T2 348 aaPredicted RBP19.49■□□□□ 0.71
COL23A1-202ENST00000407622 NWD2Q9ULI1 1742 aa19.49■□□□□ 0.71
COL23A1-202ENST00000407622 SPTLC3Q9NUV7 552 aa19.48■□□□□ 0.71
COL23A1-202ENST00000407622 SALL1Q9NSC2 1324 aa19.48■□□□□ 0.71
COL23A1-202ENST00000407622 TOGARAM1Q9Y4F4 1720 aa19.48■□□□□ 0.71
COL23A1-202ENST00000407622 PDIA3P30101 505 aaKnown RBP19.48■□□□□ 0.71
COL23A1-202ENST00000407622 PI16Q6UXB8 463 aa19.48■□□□□ 0.71
COL23A1-202ENST00000407622 DNAJC25Q9H1X3 360 aa19.48■□□□□ 0.71
COL23A1-202ENST00000407622 CEP126Q9P2H0 1117 aa19.48■□□□□ 0.71
COL23A1-202ENST00000407622 NUTM2BA6NNL0 878 aaPredicted RBP19.47■□□□□ 0.71
COL23A1-202ENST00000407622 NUTM2EB1AL46 878 aaPredicted RBP19.47■□□□□ 0.71
COL23A1-202ENST00000407622 HAND2P61296 217 aa19.47■□□□□ 0.71
COL23A1-202ENST00000407622 NUTM2AQ8IVF1 878 aaPredicted RBP19.47■□□□□ 0.71
COL23A1-202ENST00000407622 SYNE4Q8N205 404 aa19.47■□□□□ 0.71
COL23A1-202ENST00000407622 FAM89AQ96GI7 184 aa19.47■□□□□ 0.71
COL23A1-202ENST00000407622 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.47■□□□□ 0.71
COL23A1-202ENST00000407622 NAA16Q6N069 864 aaPredicted RBP19.47■□□□□ 0.71
COL23A1-202ENST00000407622 ILDR1Q86SU0 546 aaPredicted RBP19.47■□□□□ 0.71
COL23A1-202ENST00000407622 KIAA1524Q8TCG1 905 aa19.47■□□□□ 0.71
COL23A1-202ENST00000407622 CERKQ8TCT0 537 aa19.47■□□□□ 0.71
COL23A1-202ENST00000407622 XAGE2Q96GT9 111 aa19.47■□□□□ 0.71
COL23A1-202ENST00000407622 USP28Q96RU2 1077 aa19.47■□□□□ 0.71
COL23A1-202ENST00000407622 GOLPH3LQ9H4A5 285 aa19.47■□□□□ 0.71
COL23A1-202ENST00000407622 ATG3Q9NT62 314 aa19.47■□□□□ 0.71
COL23A1-202ENST00000407622 SPEF2Q9C093 1822 aa19.46■□□□□ 0.71
COL23A1-202ENST00000407622 PTGS1P23219 599 aa19.46■□□□□ 0.71
COL23A1-202ENST00000407622 TCIRG1Q13488 830 aa19.46■□□□□ 0.71
COL23A1-202ENST00000407622 CCDC57Q2TAC2 916 aa19.46■□□□□ 0.71
COL23A1-202ENST00000407622 CFAP45Q9UL16 551 aa19.46■□□□□ 0.71
COL23A1-202ENST00000407622 PDCL3Q9H2J4 239 aa19.46■□□□□ 0.71
COL23A1-202ENST00000407622 DYNC1I1O14576 645 aa19.45■□□□□ 0.7
COL23A1-202ENST00000407622 TTC39AQ5SRH9 613 aa19.45■□□□□ 0.7
COL23A1-202ENST00000407622 TSC1Q92574 1164 aa19.45■□□□□ 0.7
COL23A1-202ENST00000407622 A0A087WWV3 80 aa19.45■□□□□ 0.7
COL23A1-202ENST00000407622 FDPSP14324 419 aaKnown RBP19.45■□□□□ 0.7
COL23A1-202ENST00000407622 HMGN5P82970 282 aaKnown RBP19.45■□□□□ 0.7
COL23A1-202ENST00000407622 WASHC4Q2M389 1173 aa19.45■□□□□ 0.7
COL23A1-202ENST00000407622 NRBP1Q9UHY1 535 aa19.45■□□□□ 0.7
COL23A1-202ENST00000407622 RCOR1Q9UKL0 485 aa19.45■□□□□ 0.7
COL23A1-202ENST00000407622 ZAP70P43403 619 aa19.44■□□□□ 0.7
COL23A1-202ENST00000407622 ZNF165P49910 485 aa19.44■□□□□ 0.7
COL23A1-202ENST00000407622 GORABQ5T7V8 394 aa19.44■□□□□ 0.7
COL23A1-202ENST00000407622 CCAR1Q8IX12 1150 aaKnown RBP19.44■□□□□ 0.7
COL23A1-202ENST00000407622 DNAJC10Q8IXB1 793 aa19.44■□□□□ 0.7
COL23A1-202ENST00000407622 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.44■□□□□ 0.7
COL23A1-202ENST00000407622 ASAP1Q9ULH1 1129 aa19.44■□□□□ 0.7
COL23A1-202ENST00000407622 CARMIL3Q8ND23 1372 aa19.44■□□□□ 0.7
COL23A1-202ENST00000407622 CCDC158Q5M9N0 1113 aa19.43■□□□□ 0.7
COL23A1-202ENST00000407622 OTUD7BQ6GQQ9 843 aa19.43■□□□□ 0.7
COL23A1-202ENST00000407622 MYRIPQ8NFW9 859 aa19.43■□□□□ 0.7
COL23A1-202ENST00000407622 TDRD7Q8NHU6 1098 aaKnown RBP19.43■□□□□ 0.7
COL23A1-202ENST00000407622 PUS7LQ9H0K6 701 aaKnown RBP19.43■□□□□ 0.7
COL23A1-202ENST00000407622 C11orf57Q6ZUT1 292 aaPredicted RBP19.43■□□□□ 0.7
COL23A1-202ENST00000407622 RAB11FIP4Q86YS3 637 aa19.43■□□□□ 0.7
COL23A1-202ENST00000407622 ZNF274Q96GC6 653 aaPredicted RBP19.43■□□□□ 0.7
COL23A1-202ENST00000407622 PLA2G4DQ86XP0 818 aa19.42■□□□□ 0.7
COL23A1-202ENST00000407622 FGAP02671 866 aa19.42■□□□□ 0.7
COL23A1-202ENST00000407622 ZNF75DP51815 510 aa19.42■□□□□ 0.7
COL23A1-202ENST00000407622 LRMPQ12912 555 aa19.42■□□□□ 0.7
COL23A1-202ENST00000407622 SNW1Q13573 536 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms